Strain Fitness in Rhizobium sp. OAE497 around ABIE40_RS14930

Experiment: D-Trehalose (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Trehalose (C)
2,928,912	+				-1.8
2,928,942	-				+0.5
2,928,942	-				-0.7
2,928,992	+				+0.6
2,928,992	+				-0.6
2,928,992	+				-0.2
2,928,993	-				+0.6
2,928,993	-				+0.3
2,928,993	-				-0.6
2,929,014	+				-0.0
2,929,042	+		ABIE40_RS14925	0.10	+0.4
2,929,042	+		ABIE40_RS14925	0.10	+1.3
2,929,042	+		ABIE40_RS14925	0.10	+1.6
2,929,042	+		ABIE40_RS14925	0.10	-0.1
2,929,042	+		ABIE40_RS14925	0.10	+0.0
2,929,042	+		ABIE40_RS14925	0.10	-1.3
2,929,043	-		ABIE40_RS14925	0.11	+0.0
2,929,045	+		ABIE40_RS14925	0.11	-1.3
2,929,045	+		ABIE40_RS14925	0.11	-1.4
2,929,046	-		ABIE40_RS14925	0.11	-0.4
2,929,046	-		ABIE40_RS14925	0.11	-0.9
2,929,046	-		ABIE40_RS14925	0.11	-0.1
2,929,046	-		ABIE40_RS14925	0.11	-1.2
2,929,184	+		ABIE40_RS14925	0.41	+1.3
2,929,184	+		ABIE40_RS14925	0.41	-0.2
2,929,184	+		ABIE40_RS14925	0.41	+1.3
2,929,184	+		ABIE40_RS14925	0.41	-0.2
2,929,184	+		ABIE40_RS14925	0.41	-1.6
2,929,184	+		ABIE40_RS14925	0.41	-0.8
2,929,184	+		ABIE40_RS14925	0.41	-0.6
2,929,185	-		ABIE40_RS14925	0.41	-1.6
2,929,185	-		ABIE40_RS14925	0.41	+1.1
2,929,185	-		ABIE40_RS14925	0.41	-0.1
2,929,185	-		ABIE40_RS14925	0.41	-1.6
2,929,185	-		ABIE40_RS14925	0.41	+0.6
2,929,185	-		ABIE40_RS14925	0.41	+0.8
2,929,185	-		ABIE40_RS14925	0.41	+0.0
2,929,337	+		ABIE40_RS14925	0.74	+3.2
2,929,337	+		ABIE40_RS14925	0.74	-2.5
2,929,337	+		ABIE40_RS14925	0.74	+0.9
2,929,338	-		ABIE40_RS14925	0.74	-0.2
2,929,338	-		ABIE40_RS14925	0.74	-0.3
2,929,338	-		ABIE40_RS14925	0.74	-0.1
2,929,338	-		ABIE40_RS14925	0.74	-1.0
2,929,338	-		ABIE40_RS14925	0.74	-0.1
2,929,338	-		ABIE40_RS14925	0.74	+0.3
2,929,458	+				-0.3
2,929,458	+				-1.2
2,929,696	+				+0.6
2,929,696	+				-0.4
2,929,696	+				+0.4
2,929,696	+				+0.0
2,929,697	-				-1.4
2,929,697	-				+0.0
2,929,697	-				-1.3
2,929,698	+				+2.9
2,929,698	+				-1.3
2,929,698	+				+2.4
2,929,699	-				-0.5
2,929,699	-				-0.4
2,929,699	-				+1.6
2,929,745	+				-2.0
2,929,813	+				-0.6
2,929,813	+				-1.2
2,929,814	-				-1.1
2,929,875	+				-1.5
2,929,876	-				+1.0
2,929,882	+				+1.1
2,929,882	+				+0.9
2,929,883	-				-1.4
2,929,883	-				-0.1
2,929,883	-				-0.1
2,930,083	+		ABIE40_RS14930	0.18	-0.2
2,930,083	+		ABIE40_RS14930	0.18	-1.4
2,930,084	-		ABIE40_RS14930	0.18	-0.8
2,930,084	-		ABIE40_RS14930	0.18	+1.1
2,930,222	-		ABIE40_RS14930	0.29	-0.1
2,930,377	+		ABIE40_RS14930	0.42	+0.9
2,930,377	+		ABIE40_RS14930	0.42	-0.6
2,930,377	+		ABIE40_RS14930	0.42	-0.2
2,930,378	-		ABIE40_RS14930	0.42	-0.7
2,930,378	-		ABIE40_RS14930	0.42	-0.1
2,930,379	+		ABIE40_RS14930	0.43	-1.8
2,930,379	+		ABIE40_RS14930	0.43	+0.4
2,930,380	-		ABIE40_RS14930	0.43	+0.3
2,930,380	-		ABIE40_RS14930	0.43	-0.7
2,930,380	-		ABIE40_RS14930	0.43	-0.4
2,930,380	-		ABIE40_RS14930	0.43	-0.6
2,930,380	-		ABIE40_RS14930	0.43	-0.3
2,930,501	-		ABIE40_RS14930	0.53	+0.2
2,930,766	+		ABIE40_RS14930	0.75	-0.4
2,930,766	+		ABIE40_RS14930	0.75	+0.2
2,930,766	+		ABIE40_RS14930	0.75	+0.3
2,930,766	+		ABIE40_RS14930	0.75	+1.3
2,930,766	+		ABIE40_RS14930	0.75	-1.6
2,930,766	+		ABIE40_RS14930	0.75	-2.4
2,930,766	+		ABIE40_RS14930	0.75	+2.9
2,930,767	-		ABIE40_RS14930	0.75	+0.2
2,930,767	-		ABIE40_RS14930	0.75	-0.4
2,930,767	-		ABIE40_RS14930	0.75	-0.9
2,930,767	-		ABIE40_RS14930	0.75	+0.4
2,930,770	+		ABIE40_RS14930	0.76	-0.7
2,930,770	+		ABIE40_RS14930	0.76	-0.4
2,930,770	+		ABIE40_RS14930	0.76	-0.7
2,930,771	-		ABIE40_RS14930	0.76	-1.0
2,930,771	-		ABIE40_RS14930	0.76	-0.8
2,930,771	-		ABIE40_RS14930	0.76	-2.6
2,930,771	-		ABIE40_RS14930	0.76	+0.9
2,930,772	+		ABIE40_RS14930	0.76	-0.7
2,930,773	-		ABIE40_RS14930	0.76	+0.7
2,930,773	-		ABIE40_RS14930	0.76	-1.2
2,930,773	-		ABIE40_RS14930	0.76	-0.5
2,930,773	-		ABIE40_RS14930	0.76	+0.6
2,930,830	+		ABIE40_RS14930	0.81	+2.2
2,930,830	+		ABIE40_RS14930	0.81	+1.4
2,930,830	+		ABIE40_RS14930	0.81	+0.0
2,930,830	+		ABIE40_RS14930	0.81	-0.2
2,930,831	-		ABIE40_RS14930	0.81	-2.9
2,930,831	-		ABIE40_RS14930	0.81	-0.8
2,930,831	-		ABIE40_RS14930	0.81	-0.1
2,930,890	+		ABIE40_RS14930	0.86	-0.1
2,931,138	+				-1.5
2,931,138	+				-0.7
2,931,139	-				-0.2
2,931,139	-				-0.6
2,931,139	-				-0.8
2,931,286	+				-1.8
2,931,286	+				+0.9
2,931,286	+				+2.0
2,931,286	+				-0.6
2,931,286	+				-1.4
2,931,286	+				+0.1
2,931,286	+				-0.5
2,931,286	+				-0.7
2,931,286	+				+0.2
2,931,286	+				+1.0
2,931,286	+				-0.7
2,931,286	+				-0.9
2,931,287	-				+0.7
2,931,287	-				+0.8
2,931,287	-				-0.7
2,931,287	-				-0.3
2,931,287	-				+1.4
2,931,287	-				-0.5
2,931,287	-				-0.2
2,931,287	-				+0.0
2,931,287	-				-2.0
2,931,287	-				-0.3
2,931,288	+				-0.4
2,931,288	+				-0.5
2,931,288	+				-0.3
2,931,288	+				-0.5
2,931,288	+				+0.7
2,931,288	+				+0.5
2,931,288	+				+0.9
2,931,288	+				+0.1
2,931,288	+				+0.5
2,931,288	+				+0.5
2,931,288	+				-1.7
2,931,288	+				-1.0
2,931,288	+				-0.6
2,931,288	+				+0.0
2,931,288	+				-0.2
2,931,288	+				+0.1
2,931,288	+				+0.5
2,931,288	+				-1.1
2,931,289	-				-1.4
2,931,289	-				-0.3
2,931,289	-				+0.1
2,931,289	-				-0.6
2,931,289	-				-1.3
2,931,289	-				-0.9
2,931,289	-				-0.1
2,931,289	-				-0.1
2,931,289	-				+0.6
2,931,289	-				-1.3
2,931,289	-				-0.1
2,931,289	-				-1.6
2,931,289	-				-0.3
2,931,289	-				+0.3
2,931,289	-				-0.3
2,931,289	-				+0.1
2,931,289	-				-0.6
2,931,289	-				+0.3
2,931,289	-				+0.0
2,931,516	+		ABIE40_RS14935	0.15	-0.4
2,931,516	+		ABIE40_RS14935	0.15	+1.6
2,931,517	-		ABIE40_RS14935	0.15	+0.3
2,931,517	-		ABIE40_RS14935	0.15	-0.3
2,931,528	+		ABIE40_RS14935	0.15	+0.2
2,931,528	+		ABIE40_RS14935	0.15	-1.5
2,931,529	-		ABIE40_RS14935	0.15	+0.2
2,931,606	+		ABIE40_RS14935	0.17	-0.3
2,931,756	+		ABIE40_RS14935	0.22	-0.5
2,931,757	-		ABIE40_RS14935	0.22	-1.4
2,931,757	-		ABIE40_RS14935	0.22	-0.9
2,931,757	-		ABIE40_RS14935	0.22	+0.2
2,931,758	+		ABIE40_RS14935	0.22	-1.4
2,931,758	+		ABIE40_RS14935	0.22	-0.1
2,931,758	+		ABIE40_RS14935	0.22	+0.4
2,931,758	+		ABIE40_RS14935	0.22	-0.5
2,931,758	+		ABIE40_RS14935	0.22	-0.4
2,931,758	+		ABIE40_RS14935	0.22	-1.0
2,931,758	+		ABIE40_RS14935	0.22	-3.1
2,931,758	+		ABIE40_RS14935	0.22	-1.1
2,931,758	+		ABIE40_RS14935	0.22	+0.4
2,931,758	+		ABIE40_RS14935	0.22	+0.9
2,931,759	-		ABIE40_RS14935	0.22	-1.7
2,931,759	-		ABIE40_RS14935	0.22	-1.6
2,931,759	-		ABIE40_RS14935	0.22	+0.5
2,931,759	-		ABIE40_RS14935	0.22	-0.1
2,931,759	-		ABIE40_RS14935	0.22	-0.9
2,931,759	-		ABIE40_RS14935	0.22	-0.1
2,931,759	-		ABIE40_RS14935	0.22	-0.5
2,931,885	+		ABIE40_RS14935	0.26	+0.5
2,931,885	+		ABIE40_RS14935	0.26	+0.6
2,931,885	+		ABIE40_RS14935	0.26	+0.7
2,931,885	+		ABIE40_RS14935	0.26	+0.6
2,931,885	+		ABIE40_RS14935	0.26	-0.3
2,931,885	+		ABIE40_RS14935	0.26	-1.0
2,931,885	+		ABIE40_RS14935	0.26	-0.4
2,931,886	-		ABIE40_RS14935	0.26	-0.5
2,931,886	-		ABIE40_RS14935	0.26	-0.4
2,931,886	-		ABIE40_RS14935	0.26	-0.1
2,931,886	-		ABIE40_RS14935	0.26	-0.7
2,931,886	-		ABIE40_RS14935	0.26	-1.3
2,931,886	-		ABIE40_RS14935	0.26	-0.5
2,931,886	-		ABIE40_RS14935	0.26	-0.3
2,931,900	+		ABIE40_RS14935	0.27	+0.0
2,931,900	+		ABIE40_RS14935	0.27	-0.2
2,931,900	+		ABIE40_RS14935	0.27	-1.6
2,931,901	-		ABIE40_RS14935	0.27	+0.1
2,931,901	-		ABIE40_RS14935	0.27	-0.4
2,931,901	-		ABIE40_RS14935	0.27	-0.4
2,932,029	+		ABIE40_RS14935	0.31	+0.2
2,932,029	+		ABIE40_RS14935	0.31	-0.1
2,932,042	-		ABIE40_RS14935	0.31	+1.0