Experiment: D-Fructose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABID97_RS17425 and ABID97_RS17430 are separated by 410 nucleotides ABID97_RS17430 and ABID97_RS17435 overlap by 4 nucleotides ABID97_RS17435 and ABID97_RS17440 are separated by 239 nucleotides
ABID97_RS17425: ABID97_RS17425 - TonB-dependent receptor, at 3,600,073 to 3,602,010
_RS17425
ABID97_RS17430: ABID97_RS17430 - DUF904 domain-containing protein, at 3,602,421 to 3,602,645
_RS17430
ABID97_RS17435: ABID97_RS17435 - cell division protein ZapA, at 3,602,642 to 3,602,998
_RS17435
ABID97_RS17440: ABID97_RS17440 - sulfite exporter TauE/SafE family protein, at 3,603,238 to 3,604,101
_RS17440
Position (kb)
3602
3603 Strain fitness (log2 ratio)
-1
0
1
2 at 3602.031 kb on + strand at 3602.128 kb on - strand at 3602.349 kb on + strand at 3602.407 kb on + strand at 3602.407 kb on + strand at 3602.407 kb on + strand at 3602.407 kb on + strand at 3602.408 kb on - strand at 3602.408 kb on - strand at 3602.408 kb on - strand at 3602.408 kb on - strand at 3602.678 kb on + strand, within ABID97_RS17435 at 3602.678 kb on + strand, within ABID97_RS17435 at 3602.679 kb on - strand, within ABID97_RS17435 at 3602.679 kb on - strand, within ABID97_RS17435 at 3602.956 kb on + strand, within ABID97_RS17435 at 3602.956 kb on + strand, within ABID97_RS17435 at 3602.991 kb on + strand at 3602.992 kb on - strand at 3602.992 kb on - strand at 3603.063 kb on + strand at 3603.064 kb on - strand at 3603.064 kb on - strand at 3603.101 kb on + strand at 3603.883 kb on + strand, within ABID97_RS17440 at 3603.884 kb on - strand, within ABID97_RS17440 at 3603.884 kb on - strand, within ABID97_RS17440 at 3603.884 kb on - strand, within ABID97_RS17440 at 3603.935 kb on - strand, within ABID97_RS17440 at 3603.935 kb on - strand, within ABID97_RS17440
Per-strain Table
Position Strand Gene LocusTag Fraction D-Fructose (C) remove 3,602,031 + +0.5 3,602,128 - +0.2 3,602,349 + +0.4 3,602,407 + +0.0 3,602,407 + -1.0 3,602,407 + -0.0 3,602,407 + +2.4 3,602,408 - -0.1 3,602,408 - -0.2 3,602,408 - -0.9 3,602,408 - -0.7 3,602,678 + ABID97_RS17435 0.10 +0.7 3,602,678 + ABID97_RS17435 0.10 +0.1 3,602,679 - ABID97_RS17435 0.10 +0.8 3,602,679 - ABID97_RS17435 0.10 +1.3 3,602,956 + ABID97_RS17435 0.88 +0.7 3,602,956 + ABID97_RS17435 0.88 +0.5 3,602,991 + -0.3 3,602,992 - +0.2 3,602,992 - +0.3 3,603,063 + +0.5 3,603,064 - +0.1 3,603,064 - +0.4 3,603,101 + +1.4 3,603,883 + ABID97_RS17440 0.75 -0.0 3,603,884 - ABID97_RS17440 0.75 +0.4 3,603,884 - ABID97_RS17440 0.75 +0.1 3,603,884 - ABID97_RS17440 0.75 -0.5 3,603,935 - ABID97_RS17440 0.81 -0.3 3,603,935 - ABID97_RS17440 0.81 +0.3
Or see this region's nucleotide sequence