Experiment: D-Fructose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABID97_RS16080 and ABID97_RS16085 are separated by 132 nucleotides ABID97_RS16085 and ABID97_RS16090 are separated by 38 nucleotides ABID97_RS16090 and ABID97_RS16095 are separated by 178 nucleotides ABID97_RS16095 and ABID97_RS16100 are separated by 23 nucleotides
ABID97_RS16080: ABID97_RS16080 - AraC family transcriptional regulator, at 3,331,128 to 3,332,138
_RS16080
ABID97_RS16085: ABID97_RS16085 - L,D-transpeptidase, at 3,332,271 to 3,332,909
_RS16085
ABID97_RS16090: ABID97_RS16090 - proteophosphoglycan ppg4, at 3,332,948 to 3,333,244
_RS16090
ABID97_RS16095: ABID97_RS16095 - hypothetical protein, at 3,333,423 to 3,333,662
_RS16095
ABID97_RS16100: ABID97_RS16100 - hypothetical protein, at 3,333,686 to 3,333,946
_RS16100
Position (kb)
3332
3333 Strain fitness (log2 ratio)
-1
0
1 at 3331.528 kb on + strand, within ABID97_RS16080 at 3331.529 kb on - strand, within ABID97_RS16080 at 3331.549 kb on + strand, within ABID97_RS16080 at 3331.549 kb on + strand, within ABID97_RS16080 at 3331.550 kb on - strand, within ABID97_RS16080 at 3331.574 kb on - strand, within ABID97_RS16080 at 3331.946 kb on - strand, within ABID97_RS16080 at 3332.101 kb on + strand at 3332.102 kb on - strand at 3332.102 kb on - strand at 3332.102 kb on - strand at 3332.182 kb on - strand at 3332.182 kb on - strand at 3332.326 kb on - strand at 3332.332 kb on + strand at 3332.333 kb on - strand at 3332.333 kb on - strand at 3332.333 kb on - strand at 3332.333 kb on - strand at 3332.372 kb on - strand, within ABID97_RS16085 at 3332.372 kb on - strand, within ABID97_RS16085 at 3332.512 kb on + strand, within ABID97_RS16085 at 3333.324 kb on - strand at 3333.370 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction D-Fructose (C) remove 3,331,528 + ABID97_RS16080 0.40 +0.1 3,331,529 - ABID97_RS16080 0.40 +0.5 3,331,549 + ABID97_RS16080 0.42 -0.8 3,331,549 + ABID97_RS16080 0.42 -0.4 3,331,550 - ABID97_RS16080 0.42 +0.1 3,331,574 - ABID97_RS16080 0.44 -1.2 3,331,946 - ABID97_RS16080 0.81 -0.2 3,332,101 + -0.2 3,332,102 - -0.0 3,332,102 - -0.0 3,332,102 - +0.4 3,332,182 - +0.1 3,332,182 - -0.7 3,332,326 - +0.7 3,332,332 + +0.0 3,332,333 - +0.1 3,332,333 - +0.3 3,332,333 - +0.8 3,332,333 - +0.7 3,332,372 - ABID97_RS16085 0.16 +0.8 3,332,372 - ABID97_RS16085 0.16 +0.5 3,332,512 + ABID97_RS16085 0.38 -1.5 3,333,324 - +0.6 3,333,370 + -0.4
Or see this region's nucleotide sequence