Experiment: copper (II) chloride 15 uM, aerobic
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt IAI46_23465 and IAI46_23470 are separated by 96 nucleotides IAI46_23470 and IAI46_23475 are separated by 131 nucleotides IAI46_23475 and IAI46_23480 are separated by 9 nucleotides IAI46_23480 and IAI46_23485 are separated by 8 nucleotides IAI46_23485 and IAI46_23490 overlap by 4 nucleotides
IAI46_23465: IAI46_23465 - 30S ribosomal protein S7, at 4,996,097 to 4,996,567
_23465
IAI46_23470: IAI46_23470 - 30S ribosomal protein S12, at 4,996,664 to 4,997,038
_23470
IAI46_23475: IAI46_23475 - sulfurtransferase complex subunit TusB, at 4,997,170 to 4,997,457
_23475
IAI46_23480: IAI46_23480 - sulfurtransferase complex subunit TusC, at 4,997,467 to 4,997,826
_23480
IAI46_23485: IAI46_23485 - sulfurtransferase complex subunit TusD, at 4,997,835 to 4,998,221
_23485
IAI46_23490: IAI46_23490 - transcriptional regulator, at 4,998,218 to 4,998,946
_23490
Position (kb)
4997
4998 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 4997.106 kb on - strand at 4997.106 kb on - strand at 4997.153 kb on - strand at 4997.154 kb on + strand at 4997.154 kb on + strand at 4997.469 kb on - strand at 4998.271 kb on - strand at 4998.271 kb on - strand at 4998.277 kb on - strand at 4998.277 kb on - strand at 4998.277 kb on - strand at 4998.277 kb on - strand at 4998.296 kb on - strand, within IAI46_23490 at 4998.369 kb on - strand, within IAI46_23490 at 4998.401 kb on - strand, within IAI46_23490 at 4998.413 kb on - strand, within IAI46_23490
Per-strain Table
Position Strand Gene LocusTag Fraction copper (II) chloride 15 uM, aerobic remove 4,997,106 - +0.2 4,997,106 - +2.2 4,997,153 - +0.2 4,997,154 + +0.7 4,997,154 + -0.8 4,997,469 - +0.4 4,998,271 - -0.4 4,998,271 - -1.1 4,998,277 - +0.3 4,998,277 - +0.2 4,998,277 - +0.0 4,998,277 - +0.9 4,998,296 - IAI46_23490 0.11 +1.3 4,998,369 - IAI46_23490 0.21 +0.4 4,998,401 - IAI46_23490 0.25 -2.2 4,998,413 - IAI46_23490 0.27 +0.2
Or see this region's nucleotide sequence