Strain Fitness in Serratia liquefaciens MT49 around IAI46_19410

Experiment: copper (II) chloride 15 uM, aerobic

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	copper (II) chloride 15 uM, aerobic
4,095,538	+		IAI46_19405	0.25	+1.0
4,095,539	-		IAI46_19405	0.25	-0.0
4,095,539	-		IAI46_19405	0.25	-0.6
4,095,539	-		IAI46_19405	0.25	+0.8
4,095,539	-		IAI46_19405	0.25	+0.2
4,095,539	-		IAI46_19405	0.25	+0.6
4,095,547	+		IAI46_19405	0.26	-0.6
4,095,547	+		IAI46_19405	0.26	+0.7
4,095,548	-		IAI46_19405	0.26	+0.3
4,095,548	-		IAI46_19405	0.26	+0.3
4,095,635	-		IAI46_19405	0.33	-0.8
4,095,635	-		IAI46_19405	0.33	+0.1
4,095,635	-		IAI46_19405	0.33	+0.5
4,095,644	+		IAI46_19405	0.34	-0.0
4,095,645	-		IAI46_19405	0.34	-0.0
4,095,671	-		IAI46_19405	0.36	+0.9
4,095,678	-		IAI46_19405	0.37	+0.4
4,095,790	+		IAI46_19405	0.46	+0.4
4,095,790	+		IAI46_19405	0.46	-2.3
4,095,791	-		IAI46_19405	0.46	+1.4
4,095,913	+		IAI46_19405	0.57	-1.1
4,095,914	-		IAI46_19405	0.57	-0.3
4,095,965	+		IAI46_19405	0.61	-0.0
4,095,965	+		IAI46_19405	0.61	-0.5
4,095,990	+		IAI46_19405	0.63	-0.1
4,096,078	+		IAI46_19405	0.71	+0.2
4,096,078	+		IAI46_19405	0.71	+0.4
4,096,079	-		IAI46_19405	0.71	+0.4
4,096,084	+		IAI46_19405	0.71	-0.2
4,096,084	+		IAI46_19405	0.71	+0.3
4,096,084	+		IAI46_19405	0.71	+0.2
4,096,097	+		IAI46_19405	0.72	-0.4
4,096,098	-		IAI46_19405	0.72	-0.2
4,096,127	+		IAI46_19405	0.75	+0.7
4,096,127	+		IAI46_19405	0.75	-0.5
4,096,127	+		IAI46_19405	0.75	+1.4
4,096,127	+		IAI46_19405	0.75	-0.3
4,096,127	+		IAI46_19405	0.75	-0.1
4,096,127	+		IAI46_19405	0.75	+0.0
4,096,128	-		IAI46_19405	0.75	-0.8
4,096,128	-		IAI46_19405	0.75	-0.8
4,096,128	-		IAI46_19405	0.75	+0.3
4,096,128	-		IAI46_19405	0.75	+0.4
4,096,128	-		IAI46_19405	0.75	+0.9
4,096,130	-		IAI46_19405	0.75	+0.9
4,096,145	-		IAI46_19405	0.76	+0.4
4,096,253	-		IAI46_19405	0.85	+0.0
4,096,253	-		IAI46_19405	0.85	-0.3
4,096,256	+		IAI46_19405	0.86	-0.2
4,096,317	-				+0.7
4,096,329	-				+0.0
4,096,409	-				-0.4
4,096,455	+				+0.2
4,096,620	+		IAI46_19410	0.10	+0.2
4,096,620	+		IAI46_19410	0.10	+0.2
4,096,621	-		IAI46_19410	0.10	+0.0
4,096,627	-		IAI46_19410	0.11	+0.5
4,096,651	+		IAI46_19410	0.12	+0.8
4,096,663	+		IAI46_19410	0.13	-0.7
4,096,771	+		IAI46_19410	0.18	+0.8
4,096,821	+		IAI46_19410	0.21	+0.3
4,096,821	+		IAI46_19410	0.21	-2.1
4,096,821	+		IAI46_19410	0.21	+1.0
4,096,821	+		IAI46_19410	0.21	-1.3
4,096,821	+		IAI46_19410	0.21	-0.1
4,096,821	+		IAI46_19410	0.21	+0.1
4,096,822	-		IAI46_19410	0.21	-0.0
4,096,822	-		IAI46_19410	0.21	-0.1
4,096,822	-		IAI46_19410	0.21	+1.8
4,096,822	-		IAI46_19410	0.21	+0.3
4,096,822	-		IAI46_19410	0.21	-0.9
4,096,823	+		IAI46_19410	0.21	+0.4
4,096,823	+		IAI46_19410	0.21	+1.8
4,096,824	-		IAI46_19410	0.21	+0.4
4,096,828	+		IAI46_19410	0.21	-1.2
4,096,829	-		IAI46_19410	0.21	+0.9
4,096,829	-		IAI46_19410	0.21	-0.0
4,096,829	-		IAI46_19410	0.21	-1.7
4,096,829	-		IAI46_19410	0.21	+0.8
4,096,829	-		IAI46_19410	0.21	+0.9
4,096,829	-		IAI46_19410	0.21	-1.3
4,096,911	+		IAI46_19410	0.25	+0.6
4,096,911	+		IAI46_19410	0.25	+0.8
4,096,930	-		IAI46_19410	0.26	+0.0
4,096,940	+		IAI46_19410	0.27	-2.7
4,096,941	-		IAI46_19410	0.27	-0.2
4,096,941	-		IAI46_19410	0.27	-1.1
4,096,941	-		IAI46_19410	0.27	-0.8
4,096,941	-		IAI46_19410	0.27	+0.7
4,096,989	+		IAI46_19410	0.30	+1.2
4,097,074	+		IAI46_19410	0.34	+0.7
4,097,075	-		IAI46_19410	0.34	+1.2
4,097,075	-		IAI46_19410	0.34	-0.0
4,097,075	-		IAI46_19410	0.34	+0.4
4,097,075	-		IAI46_19410	0.34	+0.8
4,097,133	+		IAI46_19410	0.37	+0.1
4,097,133	+		IAI46_19410	0.37	+0.0
4,097,133	+		IAI46_19410	0.37	-0.1
4,097,133	+		IAI46_19410	0.37	+0.3
4,097,133	+		IAI46_19410	0.37	+0.7
4,097,134	-		IAI46_19410	0.37	-0.0
4,097,134	-		IAI46_19410	0.37	+0.0
4,097,134	-		IAI46_19410	0.37	-0.5
4,097,134	-		IAI46_19410	0.37	+0.4
4,097,134	-		IAI46_19410	0.37	+0.6
4,097,161	+		IAI46_19410	0.39	+0.0
4,097,162	-		IAI46_19410	0.39	+0.7
4,097,230	-		IAI46_19410	0.42	+2.1
4,097,349	+		IAI46_19410	0.48	-0.5
4,097,349	+		IAI46_19410	0.48	+0.3
4,097,482	+		IAI46_19410	0.55	-0.7
4,097,482	+		IAI46_19410	0.55	-0.6
4,097,482	+		IAI46_19410	0.55	+0.7
4,097,483	-		IAI46_19410	0.55	-0.3
4,097,483	-		IAI46_19410	0.55	+1.0
4,097,496	+		IAI46_19410	0.56	-1.8
4,097,547	+		IAI46_19410	0.59	+0.5
4,097,547	+		IAI46_19410	0.59	-0.3
4,097,548	-		IAI46_19410	0.59	+0.5
4,097,548	-		IAI46_19410	0.59	+1.5
4,097,602	-		IAI46_19410	0.62	+0.7
4,097,618	-		IAI46_19410	0.62	+1.6
4,097,618	-		IAI46_19410	0.62	+0.9
4,097,672	-		IAI46_19410	0.65	-0.2
4,097,672	-		IAI46_19410	0.65	-1.7
4,097,682	+		IAI46_19410	0.66	+0.3
4,097,683	-		IAI46_19410	0.66	+0.1
4,097,714	-		IAI46_19410	0.68	-0.1
4,097,773	+		IAI46_19410	0.71	+0.8
4,097,773	+		IAI46_19410	0.71	-0.0
4,097,773	+		IAI46_19410	0.71	+0.3
4,097,784	+		IAI46_19410	0.71	+0.5
4,097,785	-		IAI46_19410	0.71	-2.5
4,097,785	-		IAI46_19410	0.71	+0.2
4,098,019	+		IAI46_19410	0.83	+1.2
4,098,220	-				-1.7
4,098,220	-				-1.3
4,098,222	+				+0.3
4,098,222	+				+0.5
4,098,222	+				-0.3
4,098,222	+				-0.0
4,098,223	-				+0.1
4,098,329	-				+0.1
4,098,334	+				+0.4
4,098,335	-				+0.3
4,098,335	-				+0.7
4,098,335	-				+0.7
4,098,407	+				-1.7
4,098,411	+				-0.9
4,098,412	-				+0.5
4,098,412	-				-0.1
4,098,445	+				+0.3
4,098,456	-				+0.1
4,098,480	+				+0.9
4,098,481	-				+0.2
4,098,481	-				+0.2
4,098,546	+				-0.1
4,098,547	-				-0.8
4,098,567	-		IAI46_19415	0.10	+1.0
4,098,584	-		IAI46_19415	0.11	-0.2
4,098,661	+		IAI46_19415	0.17	+0.0
4,098,662	-		IAI46_19415	0.17	+0.0
4,098,662	-		IAI46_19415	0.17	-0.0
4,098,771	-		IAI46_19415	0.25	+0.0
4,098,771	-		IAI46_19415	0.25	+1.0
4,098,774	-		IAI46_19415	0.25	+1.4
4,098,968	+		IAI46_19415	0.38	-0.5
4,099,025	+		IAI46_19415	0.42	+0.9
4,099,025	+		IAI46_19415	0.42	-0.3
4,099,025	+		IAI46_19415	0.42	-0.3
4,099,114	-		IAI46_19415	0.49	-1.8
4,099,120	-		IAI46_19415	0.49	-0.8
4,099,120	-		IAI46_19415	0.49	+0.6
4,099,258	+		IAI46_19415	0.59	-0.5
4,099,258	+		IAI46_19415	0.59	-0.4
4,099,259	-		IAI46_19415	0.59	-0.4
4,099,259	-		IAI46_19415	0.59	+0.2