Experiment: copper (II) chloride 15 uM, aerobic
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt IAI46_14905 and IAI46_14910 are separated by 457 nucleotides IAI46_14910 and IAI46_14915 are separated by 29 nucleotides IAI46_14915 and IAI46_14920 are separated by 427 nucleotides
IAI46_14905: IAI46_14905 - hypothetical protein, at 3,151,149 to 3,151,361
_14905
IAI46_14910: IAI46_14910 - helix-turn-helix domain-containing protein, at 3,151,819 to 3,152,205
_14910
IAI46_14915: IAI46_14915 - DUF1304 domain-containing protein, at 3,152,235 to 3,152,588
_14915
IAI46_14920: IAI46_14920 - pirin family protein, at 3,153,016 to 3,153,957
_14920
Position (kb)
3152
3153 Strain fitness (log2 ratio)
-1
0
1 at 3151.342 kb on + strand at 3151.359 kb on + strand at 3151.493 kb on - strand at 3151.781 kb on - strand at 3151.782 kb on + strand at 3151.793 kb on + strand at 3151.797 kb on + strand at 3151.797 kb on + strand at 3151.797 kb on + strand at 3151.797 kb on + strand at 3151.798 kb on - strand at 3151.798 kb on - strand at 3151.824 kb on - strand at 3151.860 kb on + strand, within IAI46_14910 at 3151.915 kb on + strand, within IAI46_14910 at 3151.925 kb on - strand, within IAI46_14910 at 3151.984 kb on + strand, within IAI46_14910 at 3152.096 kb on - strand, within IAI46_14910 at 3152.096 kb on - strand, within IAI46_14910 at 3152.097 kb on + strand, within IAI46_14910 at 3152.098 kb on - strand, within IAI46_14910 at 3152.262 kb on - strand at 3152.423 kb on - strand, within IAI46_14915 at 3152.423 kb on - strand, within IAI46_14915 at 3152.423 kb on - strand, within IAI46_14915 at 3152.537 kb on - strand, within IAI46_14915 at 3152.555 kb on + strand at 3152.570 kb on + strand at 3152.570 kb on + strand at 3152.584 kb on - strand at 3152.624 kb on + strand at 3152.625 kb on - strand at 3152.629 kb on - strand at 3152.656 kb on + strand at 3152.709 kb on + strand at 3152.710 kb on - strand at 3152.768 kb on - strand at 3152.798 kb on + strand at 3152.799 kb on - strand at 3152.810 kb on - strand at 3152.812 kb on + strand at 3152.842 kb on + strand at 3152.863 kb on - strand at 3152.916 kb on + strand at 3152.971 kb on - strand at 3153.001 kb on + strand at 3153.124 kb on - strand, within IAI46_14920 at 3153.199 kb on + strand, within IAI46_14920 at 3153.199 kb on + strand, within IAI46_14920 at 3153.254 kb on - strand, within IAI46_14920 at 3153.319 kb on + strand, within IAI46_14920 at 3153.319 kb on + strand, within IAI46_14920 at 3153.325 kb on + strand, within IAI46_14920 at 3153.425 kb on + strand, within IAI46_14920 at 3153.425 kb on + strand, within IAI46_14920 at 3153.448 kb on + strand, within IAI46_14920 at 3153.494 kb on + strand, within IAI46_14920
Per-strain Table
Position Strand Gene LocusTag Fraction copper (II) chloride 15 uM, aerobic remove 3,151,342 + +0.9 3,151,359 + +0.3 3,151,493 - +1.1 3,151,781 - +1.0 3,151,782 + -0.9 3,151,793 + +0.3 3,151,797 + +0.7 3,151,797 + -0.5 3,151,797 + +0.5 3,151,797 + +1.0 3,151,798 - -0.9 3,151,798 - -1.0 3,151,824 - -0.7 3,151,860 + IAI46_14910 0.11 +0.2 3,151,915 + IAI46_14910 0.25 -0.1 3,151,925 - IAI46_14910 0.27 -0.4 3,151,984 + IAI46_14910 0.43 +0.4 3,152,096 - IAI46_14910 0.72 -0.4 3,152,096 - IAI46_14910 0.72 -0.1 3,152,097 + IAI46_14910 0.72 +0.4 3,152,098 - IAI46_14910 0.72 -0.8 3,152,262 - +0.3 3,152,423 - IAI46_14915 0.53 +0.4 3,152,423 - IAI46_14915 0.53 -0.3 3,152,423 - IAI46_14915 0.53 +0.5 3,152,537 - IAI46_14915 0.85 +0.1 3,152,555 + +0.1 3,152,570 + +0.2 3,152,570 + +1.2 3,152,584 - -0.4 3,152,624 + +1.4 3,152,625 - +0.1 3,152,629 - +0.2 3,152,656 + +0.2 3,152,709 + +0.8 3,152,710 - +0.6 3,152,768 - -0.5 3,152,798 + +1.0 3,152,799 - +0.2 3,152,810 - -0.1 3,152,812 + -0.4 3,152,842 + -0.0 3,152,863 - +0.2 3,152,916 + -0.7 3,152,971 - +0.4 3,153,001 + -1.2 3,153,124 - IAI46_14920 0.11 +0.9 3,153,199 + IAI46_14920 0.19 +0.9 3,153,199 + IAI46_14920 0.19 +0.3 3,153,254 - IAI46_14920 0.25 +0.0 3,153,319 + IAI46_14920 0.32 -0.9 3,153,319 + IAI46_14920 0.32 -1.1 3,153,325 + IAI46_14920 0.33 +0.6 3,153,425 + IAI46_14920 0.43 +0.2 3,153,425 + IAI46_14920 0.43 -1.6 3,153,448 + IAI46_14920 0.46 +0.3 3,153,494 + IAI46_14920 0.51 -0.1
Or see this region's nucleotide sequence