Strain Fitness in Serratia liquefaciens MT49 around IAI46_09785

Experiment: copper (II) chloride 15 uM, aerobic

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntIAI46_09775 and IAI46_09780 are separated by 6 nucleotidesIAI46_09780 and IAI46_09785 are separated by 16 nucleotidesIAI46_09785 and IAI46_09790 are separated by 11 nucleotidesIAI46_09790 and IAI46_09795 are separated by 154 nucleotides IAI46_09775: IAI46_09775 - phosphate acyltransferase PlsX, at 2,070,762 to 2,071,796 _09775 IAI46_09780: IAI46_09780 - ketoacyl-ACP synthase III, at 2,071,803 to 2,072,756 _09780 IAI46_09785: IAI46_09785 - ACP S-malonyltransferase, at 2,072,773 to 2,073,702 _09785 IAI46_09790: IAI46_09790 - 3-oxoacyl-ACP reductase FabG, at 2,073,714 to 2,074,448 _09790 IAI46_09795: IAI46_09795 - acyl carrier protein, at 2,074,603 to 2,074,839 _09795 Position (kb) 2072 2073 2074Strain fitness (log2 ratio) -1 0 1at 2071.780 kb on + strandat 2071.780 kb on + strandat 2071.784 kb on + strandat 2073.633 kb on + strandat 2074.499 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction copper (II) chloride 15 uM, aerobic
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2,071,780 + +1.0
2,071,780 + +1.0
2,071,784 + +0.5
2,073,633 + -0.9
2,074,499 + +0.1

Or see this region's nucleotide sequence