Experiment: copper (II) chloride 15 uM, aerobic
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt IAI46_04600 and IAI46_04605 are separated by 118 nucleotides IAI46_04605 and IAI46_04610 are separated by 114 nucleotides
IAI46_04600: IAI46_04600 - helix-turn-helix domain-containing protein, at 987,161 to 987,946
_04600
IAI46_04605: IAI46_04605 - class I SAM-dependent methyltransferase, at 988,065 to 988,835
_04605
IAI46_04610: IAI46_04610 - aquaporin Z, at 988,950 to 989,645
_04610
Position (kb) 988
989 Strain fitness (log2 ratio) -2
-1
0
1
2 at 987.073 kb on + strand at 987.074 kb on - strand at 987.077 kb on + strand at 987.077 kb on + strand at 987.077 kb on + strand at 987.078 kb on - strand at 987.078 kb on - strand at 987.078 kb on - strand at 987.078 kb on - strand at 987.098 kb on + strand at 987.099 kb on - strand at 987.119 kb on + strand at 987.145 kb on - strand at 987.214 kb on + strand at 987.214 kb on + strand at 987.265 kb on + strand, within IAI46_04600 at 987.265 kb on + strand, within IAI46_04600 at 987.266 kb on - strand, within IAI46_04600 at 987.290 kb on + strand, within IAI46_04600 at 987.290 kb on + strand, within IAI46_04600 at 987.332 kb on - strand, within IAI46_04600 at 987.371 kb on - strand, within IAI46_04600 at 987.472 kb on + strand, within IAI46_04600 at 987.472 kb on + strand, within IAI46_04600 at 987.473 kb on - strand, within IAI46_04600 at 987.473 kb on - strand, within IAI46_04600 at 987.577 kb on - strand, within IAI46_04600 at 987.681 kb on + strand, within IAI46_04600 at 987.733 kb on + strand, within IAI46_04600 at 987.734 kb on - strand, within IAI46_04600 at 987.734 kb on - strand, within IAI46_04600 at 987.749 kb on + strand, within IAI46_04600 at 987.750 kb on - strand, within IAI46_04600 at 987.777 kb on + strand, within IAI46_04600 at 987.778 kb on - strand, within IAI46_04600 at 987.794 kb on - strand, within IAI46_04600 at 987.946 kb on + strand at 987.947 kb on - strand at 987.964 kb on + strand at 987.965 kb on - strand at 987.967 kb on + strand at 987.994 kb on - strand at 987.996 kb on - strand at 987.999 kb on - strand at 987.999 kb on - strand at 987.999 kb on - strand at 988.007 kb on + strand at 988.007 kb on + strand at 988.008 kb on - strand at 988.009 kb on + strand at 988.009 kb on + strand at 988.012 kb on + strand at 988.015 kb on + strand at 988.015 kb on + strand at 988.016 kb on - strand at 988.060 kb on + strand at 988.060 kb on + strand at 988.060 kb on + strand at 988.060 kb on + strand at 988.060 kb on + strand at 988.060 kb on + strand at 988.061 kb on - strand at 988.064 kb on + strand at 988.064 kb on + strand at 988.065 kb on - strand at 988.065 kb on - strand at 988.065 kb on - strand at 988.065 kb on - strand at 988.065 kb on - strand at 988.086 kb on - strand at 988.129 kb on - strand at 988.502 kb on + strand, within IAI46_04605 at 988.542 kb on + strand, within IAI46_04605 at 988.542 kb on + strand, within IAI46_04605 at 988.542 kb on + strand, within IAI46_04605 at 988.542 kb on + strand, within IAI46_04605 at 988.542 kb on + strand, within IAI46_04605 at 988.590 kb on + strand, within IAI46_04605 at 988.590 kb on + strand, within IAI46_04605 at 988.663 kb on + strand, within IAI46_04605 at 988.664 kb on - strand, within IAI46_04605 at 988.664 kb on - strand, within IAI46_04605 at 988.664 kb on - strand, within IAI46_04605 at 988.664 kb on - strand, within IAI46_04605 at 988.664 kb on - strand, within IAI46_04605 at 988.664 kb on - strand, within IAI46_04605 at 988.664 kb on - strand, within IAI46_04605 at 988.664 kb on - strand, within IAI46_04605 at 988.666 kb on - strand, within IAI46_04605 at 988.666 kb on - strand, within IAI46_04605 at 988.666 kb on - strand, within IAI46_04605 at 988.695 kb on - strand, within IAI46_04605 at 988.808 kb on + strand at 988.809 kb on - strand at 988.809 kb on - strand at 988.838 kb on - strand at 988.853 kb on + strand at 988.853 kb on + strand at 988.853 kb on + strand at 988.853 kb on + strand at 988.854 kb on - strand at 988.854 kb on - strand at 988.854 kb on - strand at 988.854 kb on - strand at 988.855 kb on + strand at 988.855 kb on + strand at 988.855 kb on + strand at 988.855 kb on + strand at 988.856 kb on - strand at 988.857 kb on + strand at 988.857 kb on + strand at 988.858 kb on - strand at 988.858 kb on - strand at 988.914 kb on + strand at 988.915 kb on - strand at 988.915 kb on - strand at 988.915 kb on - strand at 988.947 kb on - strand at 988.952 kb on - strand at 989.008 kb on - strand at 989.008 kb on - strand at 989.008 kb on - strand at 989.008 kb on - strand at 989.062 kb on - strand, within IAI46_04610 at 989.067 kb on + strand, within IAI46_04610 at 989.068 kb on - strand, within IAI46_04610 at 989.068 kb on - strand, within IAI46_04610 at 989.183 kb on + strand, within IAI46_04610 at 989.184 kb on - strand, within IAI46_04610 at 989.202 kb on - strand, within IAI46_04610 at 989.227 kb on - strand, within IAI46_04610 at 989.237 kb on + strand, within IAI46_04610 at 989.348 kb on - strand, within IAI46_04610 at 989.402 kb on + strand, within IAI46_04610 at 989.403 kb on - strand, within IAI46_04610 at 989.437 kb on - strand, within IAI46_04610 at 989.477 kb on + strand, within IAI46_04610 at 989.492 kb on - strand, within IAI46_04610 at 989.492 kb on - strand, within IAI46_04610 at 989.499 kb on - strand, within IAI46_04610 at 989.505 kb on + strand, within IAI46_04610 at 989.506 kb on - strand, within IAI46_04610 at 989.546 kb on + strand, within IAI46_04610 at 989.574 kb on + strand, within IAI46_04610 at 989.574 kb on + strand, within IAI46_04610 at 989.574 kb on + strand, within IAI46_04610 at 989.575 kb on - strand, within IAI46_04610 at 989.645 kb on + strand at 989.646 kb on - strand at 989.725 kb on + strand at 989.727 kb on + strand at 989.767 kb on - strand at 989.814 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction copper (II) chloride 15 uM, aerobic remove 987,073 + +0.9 987,074 - -0.8 987,077 + +0.2 987,077 + +0.7 987,077 + +0.0 987,078 - +0.2 987,078 - +0.5 987,078 - +0.0 987,078 - +0.4 987,098 + +0.2 987,099 - -0.4 987,119 + +0.2 987,145 - +1.0 987,214 + -0.1 987,214 + -0.5 987,265 + IAI46_04600 0.13 -1.1 987,265 + IAI46_04600 0.13 -1.2 987,266 - IAI46_04600 0.13 +0.5 987,290 + IAI46_04600 0.16 +1.0 987,290 + IAI46_04600 0.16 -0.3 987,332 - IAI46_04600 0.22 +0.2 987,371 - IAI46_04600 0.27 -0.3 987,472 + IAI46_04600 0.40 -0.8 987,472 + IAI46_04600 0.40 -0.4 987,473 - IAI46_04600 0.40 -0.9 987,473 - IAI46_04600 0.40 -0.9 987,577 - IAI46_04600 0.53 +0.8 987,681 + IAI46_04600 0.66 -0.2 987,733 + IAI46_04600 0.73 -0.5 987,734 - IAI46_04600 0.73 -0.8 987,734 - IAI46_04600 0.73 -0.3 987,749 + IAI46_04600 0.75 +0.3 987,750 - IAI46_04600 0.75 -0.6 987,777 + IAI46_04600 0.78 +0.1 987,778 - IAI46_04600 0.78 +0.8 987,794 - IAI46_04600 0.81 +0.2 987,946 + +0.8 987,947 - -0.9 987,964 + -0.6 987,965 - -0.3 987,967 + -0.5 987,994 - +0.5 987,996 - +0.8 987,999 - -1.2 987,999 - +0.4 987,999 - +0.7 988,007 + -1.0 988,007 + +0.3 988,008 - +1.2 988,009 + -0.1 988,009 + +1.2 988,012 + +0.4 988,015 + -0.8 988,015 + +0.5 988,016 - -0.2 988,060 + -0.0 988,060 + -1.5 988,060 + -1.0 988,060 + -0.0 988,060 + -0.1 988,060 + -1.5 988,061 - -0.6 988,064 + -0.2 988,064 + +0.2 988,065 - +1.1 988,065 - -0.0 988,065 - -0.5 988,065 - -0.1 988,065 - +0.2 988,086 - +0.0 988,129 - +0.5 988,502 + IAI46_04605 0.57 +0.2 988,542 + IAI46_04605 0.62 -0.2 988,542 + IAI46_04605 0.62 +1.1 988,542 + IAI46_04605 0.62 +0.2 988,542 + IAI46_04605 0.62 +0.1 988,542 + IAI46_04605 0.62 +1.4 988,590 + IAI46_04605 0.68 +0.8 988,590 + IAI46_04605 0.68 +0.7 988,663 + IAI46_04605 0.78 +0.0 988,664 - IAI46_04605 0.78 -0.0 988,664 - IAI46_04605 0.78 +0.5 988,664 - IAI46_04605 0.78 +0.8 988,664 - IAI46_04605 0.78 +0.1 988,664 - IAI46_04605 0.78 -0.5 988,664 - IAI46_04605 0.78 +0.3 988,664 - IAI46_04605 0.78 -2.3 988,664 - IAI46_04605 0.78 +2.6 988,666 - IAI46_04605 0.78 -0.7 988,666 - IAI46_04605 0.78 +0.7 988,666 - IAI46_04605 0.78 +0.4 988,695 - IAI46_04605 0.82 +0.7 988,808 + -1.0 988,809 - +0.6 988,809 - +1.5 988,838 - -0.0 988,853 + +0.9 988,853 + -0.3 988,853 + -0.3 988,853 + +0.4 988,854 - -0.9 988,854 - -1.0 988,854 - +0.1 988,854 - -0.0 988,855 + -0.5 988,855 + -2.4 988,855 + -1.3 988,855 + +0.1 988,856 - -0.8 988,857 + -0.4 988,857 + -0.2 988,858 - -0.2 988,858 - +0.6 988,914 + +0.3 988,915 - -0.3 988,915 - +0.4 988,915 - -0.1 988,947 - +0.2 988,952 - +0.9 989,008 - -0.5 989,008 - +0.2 989,008 - +1.1 989,008 - +0.3 989,062 - IAI46_04610 0.16 -0.7 989,067 + IAI46_04610 0.17 +0.6 989,068 - IAI46_04610 0.17 +0.0 989,068 - IAI46_04610 0.17 +0.1 989,183 + IAI46_04610 0.33 +0.2 989,184 - IAI46_04610 0.34 +0.2 989,202 - IAI46_04610 0.36 -0.1 989,227 - IAI46_04610 0.40 +0.6 989,237 + IAI46_04610 0.41 +0.0 989,348 - IAI46_04610 0.57 +0.4 989,402 + IAI46_04610 0.65 +0.1 989,403 - IAI46_04610 0.65 -0.8 989,437 - IAI46_04610 0.70 +0.1 989,477 + IAI46_04610 0.76 +0.6 989,492 - IAI46_04610 0.78 +0.4 989,492 - IAI46_04610 0.78 +1.3 989,499 - IAI46_04610 0.79 +0.4 989,505 + IAI46_04610 0.80 +0.5 989,506 - IAI46_04610 0.80 +0.3 989,546 + IAI46_04610 0.86 +0.3 989,574 + IAI46_04610 0.90 -0.0 989,574 + IAI46_04610 0.90 +0.8 989,574 + IAI46_04610 0.90 +0.9 989,575 - IAI46_04610 0.90 -1.0 989,645 + -0.6 989,646 - -0.3 989,725 + +0.3 989,727 + +0.6 989,767 - +0.2 989,814 - +1.0
Or see this region's nucleotide sequence