Experiment: copper (II) chloride 15 uM, aerobic
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt IAI46_03055 and IAI46_03060 are separated by 150 nucleotides IAI46_03060 and IAI46_03065 are separated by 123 nucleotides IAI46_03065 and IAI46_03070 are separated by 51 nucleotides IAI46_03070 and IAI46_03075 are separated by 324 nucleotides
IAI46_03055: IAI46_03055 - transaldolase, at 652,425 to 653,378
_03055
IAI46_03060: IAI46_03060 - molybdopterin adenylyltransferase, at 653,529 to 654,116
_03060
IAI46_03065: IAI46_03065 - MFS transporter, at 654,240 to 655,547
_03065
IAI46_03070: IAI46_03070 - acetate uptake transporter, at 655,599 to 656,198
_03070
IAI46_03075: IAI46_03075 - molecular chaperone DnaK, at 656,523 to 658,436
_03075
Position (kb) 654
655
656 Strain fitness (log2 ratio) -2
-1
0
1
2 at 653.458 kb on + strand at 653.458 kb on + strand at 653.458 kb on + strand at 653.458 kb on + strand at 653.459 kb on - strand at 653.459 kb on - strand at 653.460 kb on + strand at 653.460 kb on + strand at 653.460 kb on + strand at 653.461 kb on - strand at 653.461 kb on - strand at 653.475 kb on + strand at 653.510 kb on + strand at 653.510 kb on + strand at 653.525 kb on - strand at 653.536 kb on + strand at 653.536 kb on + strand at 653.536 kb on + strand at 653.536 kb on + strand at 653.536 kb on + strand at 653.537 kb on - strand at 653.537 kb on - strand at 653.537 kb on - strand at 653.537 kb on - strand at 653.537 kb on - strand at 653.537 kb on - strand at 653.539 kb on + strand at 653.539 kb on + strand at 653.539 kb on + strand at 653.539 kb on + strand at 653.539 kb on + strand at 653.539 kb on + strand at 653.540 kb on - strand at 653.540 kb on - strand at 653.540 kb on - strand at 653.543 kb on + strand at 653.543 kb on + strand at 653.543 kb on + strand at 653.851 kb on + strand, within IAI46_03060 at 653.851 kb on + strand, within IAI46_03060 at 653.851 kb on + strand, within IAI46_03060 at 653.851 kb on + strand, within IAI46_03060 at 653.856 kb on + strand, within IAI46_03060 at 653.856 kb on + strand, within IAI46_03060 at 653.856 kb on + strand, within IAI46_03060 at 653.857 kb on - strand, within IAI46_03060 at 653.857 kb on - strand, within IAI46_03060 at 653.857 kb on - strand, within IAI46_03060 at 653.857 kb on - strand, within IAI46_03060 at 653.999 kb on + strand, within IAI46_03060 at 654.000 kb on - strand, within IAI46_03060 at 654.018 kb on + strand, within IAI46_03060 at 654.018 kb on + strand, within IAI46_03060 at 654.045 kb on + strand, within IAI46_03060 at 654.045 kb on + strand, within IAI46_03060 at 654.045 kb on + strand, within IAI46_03060 at 654.045 kb on + strand, within IAI46_03060 at 654.045 kb on + strand, within IAI46_03060 at 654.045 kb on + strand, within IAI46_03060 at 654.046 kb on - strand, within IAI46_03060 at 654.046 kb on - strand, within IAI46_03060 at 654.046 kb on - strand, within IAI46_03060 at 654.070 kb on + strand at 654.070 kb on + strand at 654.071 kb on - strand at 654.071 kb on - strand at 654.071 kb on - strand at 654.081 kb on - strand at 654.081 kb on - strand at 654.106 kb on + strand at 654.127 kb on - strand at 654.127 kb on - strand at 654.136 kb on + strand at 654.180 kb on - strand at 654.240 kb on - strand at 654.240 kb on - strand at 654.251 kb on + strand at 654.252 kb on - strand at 654.295 kb on + strand at 654.295 kb on + strand at 654.295 kb on + strand at 654.497 kb on + strand, within IAI46_03065 at 654.581 kb on + strand, within IAI46_03065 at 654.680 kb on - strand, within IAI46_03065 at 654.738 kb on - strand, within IAI46_03065 at 654.776 kb on + strand, within IAI46_03065 at 654.776 kb on + strand, within IAI46_03065 at 654.776 kb on + strand, within IAI46_03065 at 654.776 kb on + strand, within IAI46_03065 at 654.777 kb on - strand, within IAI46_03065 at 654.858 kb on + strand, within IAI46_03065 at 654.858 kb on + strand, within IAI46_03065 at 654.859 kb on - strand, within IAI46_03065 at 654.859 kb on - strand, within IAI46_03065 at 654.953 kb on + strand, within IAI46_03065 at 655.041 kb on + strand, within IAI46_03065 at 655.210 kb on + strand, within IAI46_03065 at 655.210 kb on + strand, within IAI46_03065 at 655.211 kb on - strand, within IAI46_03065 at 655.258 kb on - strand, within IAI46_03065 at 655.258 kb on - strand, within IAI46_03065 at 655.297 kb on + strand, within IAI46_03065 at 655.297 kb on + strand, within IAI46_03065 at 655.302 kb on + strand, within IAI46_03065 at 655.302 kb on + strand, within IAI46_03065 at 655.302 kb on + strand, within IAI46_03065 at 655.303 kb on - strand, within IAI46_03065 at 655.303 kb on - strand, within IAI46_03065 at 655.303 kb on - strand, within IAI46_03065 at 655.359 kb on + strand, within IAI46_03065 at 655.359 kb on + strand, within IAI46_03065 at 655.360 kb on - strand, within IAI46_03065 at 655.360 kb on - strand, within IAI46_03065 at 655.360 kb on - strand, within IAI46_03065 at 655.360 kb on - strand, within IAI46_03065 at 655.360 kb on - strand, within IAI46_03065 at 655.360 kb on - strand, within IAI46_03065 at 655.361 kb on + strand, within IAI46_03065 at 655.361 kb on + strand, within IAI46_03065 at 655.361 kb on + strand, within IAI46_03065 at 655.362 kb on - strand, within IAI46_03065 at 655.362 kb on - strand, within IAI46_03065 at 655.362 kb on - strand, within IAI46_03065 at 655.371 kb on + strand, within IAI46_03065 at 655.443 kb on + strand at 655.443 kb on + strand at 655.444 kb on - strand at 655.444 kb on - strand at 655.450 kb on + strand at 655.451 kb on - strand at 655.451 kb on - strand at 655.451 kb on - strand at 655.468 kb on + strand at 655.489 kb on - strand at 655.539 kb on + strand at 655.539 kb on + strand at 655.540 kb on - strand at 655.545 kb on + strand at 655.601 kb on - strand at 655.601 kb on - strand at 655.617 kb on - strand at 655.623 kb on + strand at 655.623 kb on + strand at 655.623 kb on + strand at 655.623 kb on + strand at 655.624 kb on - strand at 655.624 kb on - strand at 655.624 kb on - strand at 655.624 kb on - strand at 655.694 kb on + strand, within IAI46_03070 at 655.695 kb on - strand, within IAI46_03070 at 655.702 kb on + strand, within IAI46_03070 at 655.703 kb on - strand, within IAI46_03070 at 655.736 kb on - strand, within IAI46_03070 at 655.894 kb on + strand, within IAI46_03070 at 655.895 kb on - strand, within IAI46_03070 at 655.992 kb on - strand, within IAI46_03070 at 655.992 kb on - strand, within IAI46_03070 at 656.012 kb on + strand, within IAI46_03070 at 656.026 kb on + strand, within IAI46_03070 at 656.045 kb on + strand, within IAI46_03070 at 656.045 kb on + strand, within IAI46_03070 at 656.045 kb on + strand, within IAI46_03070 at 656.046 kb on - strand, within IAI46_03070 at 656.198 kb on + strand at 656.198 kb on + strand at 656.198 kb on + strand at 656.198 kb on + strand at 656.198 kb on + strand at 656.198 kb on + strand at 656.198 kb on + strand at 656.198 kb on + strand at 656.198 kb on + strand at 656.198 kb on + strand at 656.199 kb on - strand at 656.199 kb on - strand at 656.199 kb on - strand at 656.199 kb on - strand at 656.199 kb on - strand at 656.199 kb on - strand at 656.199 kb on - strand at 656.199 kb on - strand at 656.199 kb on - strand at 656.199 kb on - strand at 656.199 kb on - strand at 656.199 kb on - strand at 656.199 kb on - strand at 656.199 kb on - strand at 656.199 kb on - strand at 656.241 kb on - strand at 656.249 kb on - strand at 656.275 kb on - strand at 656.303 kb on + strand at 656.303 kb on + strand at 656.303 kb on + strand at 656.303 kb on + strand at 656.303 kb on + strand at 656.303 kb on + strand at 656.304 kb on - strand at 656.304 kb on - strand at 656.304 kb on - strand at 656.304 kb on - strand at 656.387 kb on - strand at 656.387 kb on - strand at 656.387 kb on - strand at 656.475 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction copper (II) chloride 15 uM, aerobic remove 653,458 + -0.7 653,458 + +0.1 653,458 + +0.3 653,458 + -0.1 653,459 - -0.6 653,459 - +0.5 653,460 + -0.4 653,460 + -0.9 653,460 + -0.2 653,461 - +0.3 653,461 - -0.3 653,475 + +0.4 653,510 + +0.1 653,510 + +0.6 653,525 - +0.3 653,536 + -0.3 653,536 + -0.5 653,536 + +0.6 653,536 + +0.2 653,536 + +0.2 653,537 - -0.2 653,537 - -0.1 653,537 - +0.7 653,537 - +0.5 653,537 - -1.2 653,537 - -0.2 653,539 + +0.8 653,539 + -0.0 653,539 + +0.4 653,539 + +1.2 653,539 + +1.4 653,539 + -0.7 653,540 - +0.5 653,540 - +0.7 653,540 - -0.1 653,543 + -0.1 653,543 + -0.1 653,543 + -0.7 653,851 + IAI46_03060 0.55 +0.3 653,851 + IAI46_03060 0.55 +0.0 653,851 + IAI46_03060 0.55 -0.1 653,851 + IAI46_03060 0.55 +1.4 653,856 + IAI46_03060 0.56 +0.3 653,856 + IAI46_03060 0.56 +0.7 653,856 + IAI46_03060 0.56 +0.7 653,857 - IAI46_03060 0.56 +0.1 653,857 - IAI46_03060 0.56 -0.2 653,857 - IAI46_03060 0.56 -0.6 653,857 - IAI46_03060 0.56 +0.9 653,999 + IAI46_03060 0.80 -0.4 654,000 - IAI46_03060 0.80 +0.4 654,018 + IAI46_03060 0.83 -1.7 654,018 + IAI46_03060 0.83 +1.3 654,045 + IAI46_03060 0.88 -1.4 654,045 + IAI46_03060 0.88 +2.3 654,045 + IAI46_03060 0.88 +0.4 654,045 + IAI46_03060 0.88 -0.7 654,045 + IAI46_03060 0.88 +0.5 654,045 + IAI46_03060 0.88 +0.1 654,046 - IAI46_03060 0.88 +0.8 654,046 - IAI46_03060 0.88 -0.3 654,046 - IAI46_03060 0.88 -0.5 654,070 + +1.0 654,070 + -0.9 654,071 - +0.4 654,071 - +2.5 654,071 - +0.1 654,081 - +0.5 654,081 - -0.4 654,106 + -0.0 654,127 - +1.8 654,127 - -1.7 654,136 + +0.3 654,180 - +0.3 654,240 - -1.0 654,240 - +1.1 654,251 + +0.2 654,252 - -0.0 654,295 + -1.2 654,295 + -0.2 654,295 + -0.0 654,497 + IAI46_03065 0.20 +0.6 654,581 + IAI46_03065 0.26 +0.1 654,680 - IAI46_03065 0.34 -0.5 654,738 - IAI46_03065 0.38 -0.3 654,776 + IAI46_03065 0.41 +0.2 654,776 + IAI46_03065 0.41 +0.4 654,776 + IAI46_03065 0.41 -0.0 654,776 + IAI46_03065 0.41 -0.3 654,777 - IAI46_03065 0.41 -0.2 654,858 + IAI46_03065 0.47 +0.8 654,858 + IAI46_03065 0.47 -1.6 654,859 - IAI46_03065 0.47 +0.3 654,859 - IAI46_03065 0.47 +0.4 654,953 + IAI46_03065 0.55 -0.4 655,041 + IAI46_03065 0.61 +0.2 655,210 + IAI46_03065 0.74 +2.0 655,210 + IAI46_03065 0.74 +0.6 655,211 - IAI46_03065 0.74 +0.5 655,258 - IAI46_03065 0.78 +0.7 655,258 - IAI46_03065 0.78 -0.6 655,297 + IAI46_03065 0.81 +0.0 655,297 + IAI46_03065 0.81 -0.3 655,302 + IAI46_03065 0.81 -0.1 655,302 + IAI46_03065 0.81 +0.3 655,302 + IAI46_03065 0.81 -0.6 655,303 - IAI46_03065 0.81 +0.6 655,303 - IAI46_03065 0.81 -0.0 655,303 - IAI46_03065 0.81 +0.9 655,359 + IAI46_03065 0.86 -0.4 655,359 + IAI46_03065 0.86 -0.5 655,360 - IAI46_03065 0.86 -0.3 655,360 - IAI46_03065 0.86 -0.5 655,360 - IAI46_03065 0.86 +1.3 655,360 - IAI46_03065 0.86 -0.1 655,360 - IAI46_03065 0.86 -0.7 655,360 - IAI46_03065 0.86 +0.5 655,361 + IAI46_03065 0.86 +0.8 655,361 + IAI46_03065 0.86 +0.6 655,361 + IAI46_03065 0.86 +0.3 655,362 - IAI46_03065 0.86 -1.7 655,362 - IAI46_03065 0.86 -0.4 655,362 - IAI46_03065 0.86 -0.4 655,371 + IAI46_03065 0.86 +1.9 655,443 + +0.5 655,443 + -0.3 655,444 - -0.5 655,444 - +0.3 655,450 + +0.5 655,451 - -1.3 655,451 - +0.7 655,451 - +1.1 655,468 + -0.7 655,489 - -0.2 655,539 + -0.1 655,539 + -0.3 655,540 - -0.1 655,545 + +0.2 655,601 - -0.5 655,601 - -0.0 655,617 - +0.6 655,623 + +0.3 655,623 + +1.4 655,623 + -0.5 655,623 + -0.7 655,624 - -0.1 655,624 - +1.0 655,624 - +0.1 655,624 - +0.1 655,694 + IAI46_03070 0.16 +0.4 655,695 - IAI46_03070 0.16 +0.7 655,702 + IAI46_03070 0.17 +0.9 655,703 - IAI46_03070 0.17 +0.3 655,736 - IAI46_03070 0.23 +0.5 655,894 + IAI46_03070 0.49 +0.4 655,895 - IAI46_03070 0.49 +0.2 655,992 - IAI46_03070 0.66 +0.4 655,992 - IAI46_03070 0.66 -0.3 656,012 + IAI46_03070 0.69 -2.1 656,026 + IAI46_03070 0.71 -0.3 656,045 + IAI46_03070 0.74 -0.1 656,045 + IAI46_03070 0.74 -0.2 656,045 + IAI46_03070 0.74 +1.0 656,046 - IAI46_03070 0.74 +1.8 656,198 + +0.1 656,198 + -1.5 656,198 + -0.5 656,198 + +0.6 656,198 + -0.9 656,198 + -0.3 656,198 + +0.3 656,198 + -0.3 656,198 + -0.7 656,198 + +0.4 656,199 - +0.1 656,199 - +0.3 656,199 - -0.6 656,199 - -0.7 656,199 - +0.2 656,199 - +0.0 656,199 - -0.0 656,199 - +0.4 656,199 - -0.3 656,199 - +0.5 656,199 - -0.1 656,199 - +0.2 656,199 - +0.4 656,199 - -0.4 656,199 - -0.2 656,241 - +0.0 656,249 - -0.6 656,275 - +1.3 656,303 + +0.3 656,303 + +0.6 656,303 + -0.3 656,303 + -0.3 656,303 + -0.1 656,303 + -0.3 656,304 - -0.1 656,304 - +0.5 656,304 - +1.4 656,304 - +0.7 656,387 - +1.3 656,387 - +0.7 656,387 - -0.6 656,475 + -0.7
Or see this region's nucleotide sequence