Experiment: m.b. Cobalt chloride 0.15 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_18335 and CA264_18340 are separated by 259 nucleotides CA264_18340 and CA264_18345 are separated by 87 nucleotides CA264_18345 and CA264_18350 are separated by 76 nucleotides CA264_18350 and CA264_18355 are separated by 20 nucleotides
CA264_18335: CA264_18335 - peptidase M16, at 4,262,099 to 4,263,358
_18335
CA264_18340: CA264_18340 - dehydrogenase, at 4,263,618 to 4,265,597
_18340
CA264_18345: CA264_18345 - hypothetical protein, at 4,265,685 to 4,265,894
_18345
CA264_18350: CA264_18350 - hypothetical protein, at 4,265,971 to 4,266,297
_18350
CA264_18355: CA264_18355 - thioredoxin family protein, at 4,266,318 to 4,266,659
_18355
Position (kb)
4263
4264
4265
4266 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 4262.620 kb on - strand, within CA264_18335 at 4262.628 kb on + strand, within CA264_18335 at 4262.628 kb on + strand, within CA264_18335 at 4262.629 kb on - strand, within CA264_18335 at 4262.629 kb on - strand, within CA264_18335 at 4262.657 kb on + strand, within CA264_18335 at 4262.657 kb on + strand, within CA264_18335 at 4262.713 kb on - strand, within CA264_18335 at 4262.713 kb on - strand, within CA264_18335 at 4262.713 kb on - strand, within CA264_18335 at 4262.799 kb on - strand, within CA264_18335 at 4262.817 kb on + strand, within CA264_18335 at 4262.818 kb on - strand, within CA264_18335 at 4262.867 kb on - strand, within CA264_18335 at 4262.902 kb on - strand, within CA264_18335 at 4262.916 kb on + strand, within CA264_18335 at 4262.917 kb on - strand, within CA264_18335 at 4262.917 kb on - strand, within CA264_18335 at 4262.967 kb on + strand, within CA264_18335 at 4262.993 kb on + strand, within CA264_18335 at 4263.043 kb on + strand, within CA264_18335 at 4263.044 kb on - strand, within CA264_18335 at 4263.102 kb on + strand, within CA264_18335 at 4263.103 kb on - strand, within CA264_18335 at 4263.103 kb on - strand, within CA264_18335 at 4263.264 kb on + strand at 4263.269 kb on + strand at 4263.270 kb on - strand at 4263.328 kb on + strand at 4263.329 kb on - strand at 4263.354 kb on - strand at 4263.359 kb on - strand at 4263.359 kb on - strand at 4263.365 kb on + strand at 4263.366 kb on - strand at 4263.383 kb on + strand at 4263.383 kb on + strand at 4263.383 kb on + strand at 4263.383 kb on + strand at 4263.383 kb on + strand at 4263.383 kb on + strand at 4263.383 kb on + strand at 4263.384 kb on - strand at 4263.384 kb on - strand at 4263.384 kb on - strand at 4263.384 kb on - strand at 4263.384 kb on - strand at 4263.387 kb on + strand at 4263.388 kb on - strand at 4263.436 kb on + strand at 4263.436 kb on + strand at 4263.459 kb on - strand at 4263.461 kb on - strand at 4263.482 kb on + strand at 4263.509 kb on + strand at 4263.516 kb on + strand at 4263.516 kb on + strand at 4263.516 kb on + strand at 4263.517 kb on - strand at 4263.517 kb on - strand at 4263.547 kb on + strand at 4263.553 kb on + strand at 4263.555 kb on + strand at 4263.566 kb on + strand at 4263.595 kb on + strand at 4263.595 kb on + strand at 4263.595 kb on + strand at 4263.596 kb on - strand at 4263.624 kb on + strand at 4263.624 kb on + strand at 4263.625 kb on - strand at 4263.625 kb on - strand at 4263.639 kb on + strand at 4263.659 kb on - strand at 4263.664 kb on + strand at 4263.664 kb on + strand at 4263.665 kb on - strand at 4263.666 kb on + strand at 4263.666 kb on + strand at 4263.675 kb on - strand at 4263.807 kb on + strand at 4264.270 kb on - strand, within CA264_18340 at 4264.380 kb on + strand, within CA264_18340 at 4264.380 kb on + strand, within CA264_18340 at 4264.381 kb on - strand, within CA264_18340 at 4264.487 kb on + strand, within CA264_18340 at 4264.513 kb on + strand, within CA264_18340 at 4264.514 kb on - strand, within CA264_18340 at 4264.587 kb on + strand, within CA264_18340 at 4264.587 kb on + strand, within CA264_18340 at 4264.587 kb on + strand, within CA264_18340 at 4264.588 kb on - strand, within CA264_18340 at 4264.588 kb on - strand, within CA264_18340 at 4264.588 kb on - strand, within CA264_18340 at 4264.588 kb on - strand, within CA264_18340 at 4264.588 kb on - strand, within CA264_18340 at 4264.682 kb on + strand, within CA264_18340 at 4264.721 kb on + strand, within CA264_18340 at 4264.722 kb on - strand, within CA264_18340 at 4264.731 kb on + strand, within CA264_18340 at 4264.745 kb on + strand, within CA264_18340 at 4264.867 kb on + strand, within CA264_18340 at 4265.190 kb on + strand, within CA264_18340 at 4265.190 kb on + strand, within CA264_18340 at 4265.246 kb on + strand, within CA264_18340 at 4265.246 kb on + strand, within CA264_18340 at 4265.246 kb on + strand, within CA264_18340 at 4265.246 kb on + strand, within CA264_18340 at 4265.247 kb on - strand, within CA264_18340 at 4265.247 kb on - strand, within CA264_18340 at 4265.254 kb on - strand, within CA264_18340 at 4265.254 kb on - strand, within CA264_18340 at 4265.296 kb on + strand, within CA264_18340 at 4265.311 kb on + strand, within CA264_18340 at 4265.311 kb on + strand, within CA264_18340 at 4265.312 kb on - strand, within CA264_18340 at 4265.312 kb on - strand, within CA264_18340 at 4265.317 kb on + strand, within CA264_18340 at 4265.424 kb on - strand at 4265.425 kb on + strand at 4265.593 kb on - strand at 4265.690 kb on + strand at 4265.692 kb on + strand at 4265.711 kb on + strand, within CA264_18345 at 4265.711 kb on + strand, within CA264_18345 at 4265.893 kb on - strand at 4266.109 kb on + strand, within CA264_18350 at 4266.110 kb on - strand, within CA264_18350 at 4266.139 kb on + strand, within CA264_18350 at 4266.140 kb on - strand, within CA264_18350 at 4266.141 kb on + strand, within CA264_18350 at 4266.141 kb on + strand, within CA264_18350 at 4266.141 kb on + strand, within CA264_18350 at 4266.142 kb on - strand, within CA264_18350 at 4266.142 kb on - strand, within CA264_18350 at 4266.142 kb on - strand, within CA264_18350 at 4266.200 kb on - strand, within CA264_18350 at 4266.291 kb on + strand at 4266.295 kb on + strand at 4266.398 kb on + strand, within CA264_18355 at 4266.399 kb on - strand, within CA264_18355 at 4266.399 kb on - strand, within CA264_18355 at 4266.420 kb on - strand, within CA264_18355 at 4266.490 kb on - strand, within CA264_18355 at 4266.551 kb on - strand, within CA264_18355
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Cobalt chloride 0.15 mM remove 4,262,620 - CA264_18335 0.41 +0.1 4,262,628 + CA264_18335 0.42 -0.4 4,262,628 + CA264_18335 0.42 +0.8 4,262,629 - CA264_18335 0.42 -0.9 4,262,629 - CA264_18335 0.42 -0.9 4,262,657 + CA264_18335 0.44 -0.1 4,262,657 + CA264_18335 0.44 -0.5 4,262,713 - CA264_18335 0.49 +1.1 4,262,713 - CA264_18335 0.49 +0.4 4,262,713 - CA264_18335 0.49 +0.8 4,262,799 - CA264_18335 0.56 -0.6 4,262,817 + CA264_18335 0.57 +0.2 4,262,818 - CA264_18335 0.57 +0.4 4,262,867 - CA264_18335 0.61 -0.3 4,262,902 - CA264_18335 0.64 +1.0 4,262,916 + CA264_18335 0.65 -0.0 4,262,917 - CA264_18335 0.65 -1.1 4,262,917 - CA264_18335 0.65 -0.5 4,262,967 + CA264_18335 0.69 -0.6 4,262,993 + CA264_18335 0.71 +1.4 4,263,043 + CA264_18335 0.75 +0.2 4,263,044 - CA264_18335 0.75 +0.2 4,263,102 + CA264_18335 0.80 +0.3 4,263,103 - CA264_18335 0.80 -0.1 4,263,103 - CA264_18335 0.80 -0.4 4,263,264 + -0.4 4,263,269 + -0.3 4,263,270 - -0.0 4,263,328 + -0.7 4,263,329 - -0.3 4,263,354 - -0.5 4,263,359 - +0.3 4,263,359 - -0.1 4,263,365 + +0.3 4,263,366 - -1.6 4,263,383 + -0.0 4,263,383 + +1.4 4,263,383 + -0.0 4,263,383 + -1.6 4,263,383 + -0.0 4,263,383 + +0.8 4,263,383 + +0.9 4,263,384 - +0.2 4,263,384 - +0.3 4,263,384 - +0.1 4,263,384 - -0.6 4,263,384 - +0.3 4,263,387 + -0.2 4,263,388 - +0.2 4,263,436 + +0.2 4,263,436 + -0.3 4,263,459 - -2.2 4,263,461 - -0.5 4,263,482 + +1.6 4,263,509 + -0.9 4,263,516 + +1.0 4,263,516 + -0.3 4,263,516 + -0.4 4,263,517 - -0.7 4,263,517 - +0.5 4,263,547 + +0.6 4,263,553 + -0.4 4,263,555 + -0.2 4,263,566 + +0.4 4,263,595 + -0.4 4,263,595 + -0.5 4,263,595 + +0.7 4,263,596 - +0.5 4,263,624 + -0.6 4,263,624 + +0.4 4,263,625 - -0.2 4,263,625 - -0.6 4,263,639 + -0.7 4,263,659 - -0.5 4,263,664 + -0.4 4,263,664 + -0.0 4,263,665 - +0.1 4,263,666 + +0.1 4,263,666 + -0.4 4,263,675 - +0.5 4,263,807 + -0.9 4,264,270 - CA264_18340 0.33 +0.1 4,264,380 + CA264_18340 0.38 -0.1 4,264,380 + CA264_18340 0.38 -1.4 4,264,381 - CA264_18340 0.39 -0.0 4,264,487 + CA264_18340 0.44 -1.1 4,264,513 + CA264_18340 0.45 -0.3 4,264,514 - CA264_18340 0.45 +0.3 4,264,587 + CA264_18340 0.49 -0.0 4,264,587 + CA264_18340 0.49 -0.6 4,264,587 + CA264_18340 0.49 +0.7 4,264,588 - CA264_18340 0.49 +0.2 4,264,588 - CA264_18340 0.49 +0.9 4,264,588 - CA264_18340 0.49 -0.4 4,264,588 - CA264_18340 0.49 -0.1 4,264,588 - CA264_18340 0.49 -0.2 4,264,682 + CA264_18340 0.54 -0.6 4,264,721 + CA264_18340 0.56 -0.9 4,264,722 - CA264_18340 0.56 +0.3 4,264,731 + CA264_18340 0.56 -0.4 4,264,745 + CA264_18340 0.57 -0.5 4,264,867 + CA264_18340 0.63 -0.5 4,265,190 + CA264_18340 0.79 +1.9 4,265,190 + CA264_18340 0.79 +0.3 4,265,246 + CA264_18340 0.82 -0.3 4,265,246 + CA264_18340 0.82 +0.3 4,265,246 + CA264_18340 0.82 -1.1 4,265,246 + CA264_18340 0.82 -1.2 4,265,247 - CA264_18340 0.82 -0.8 4,265,247 - CA264_18340 0.82 +2.0 4,265,254 - CA264_18340 0.83 -0.1 4,265,254 - CA264_18340 0.83 -0.2 4,265,296 + CA264_18340 0.85 -0.3 4,265,311 + CA264_18340 0.86 -0.0 4,265,311 + CA264_18340 0.86 -0.1 4,265,312 - CA264_18340 0.86 +0.1 4,265,312 - CA264_18340 0.86 +0.7 4,265,317 + CA264_18340 0.86 -0.7 4,265,424 - +0.4 4,265,425 + -0.9 4,265,593 - -0.0 4,265,690 + -0.7 4,265,692 + -0.2 4,265,711 + CA264_18345 0.12 +0.1 4,265,711 + CA264_18345 0.12 -1.4 4,265,893 - -0.8 4,266,109 + CA264_18350 0.42 -0.3 4,266,110 - CA264_18350 0.43 -0.7 4,266,139 + CA264_18350 0.51 +2.4 4,266,140 - CA264_18350 0.52 -0.6 4,266,141 + CA264_18350 0.52 -0.1 4,266,141 + CA264_18350 0.52 +0.3 4,266,141 + CA264_18350 0.52 -0.2 4,266,142 - CA264_18350 0.52 -0.2 4,266,142 - CA264_18350 0.52 -0.1 4,266,142 - CA264_18350 0.52 +0.1 4,266,200 - CA264_18350 0.70 -0.6 4,266,291 + -0.5 4,266,295 + -0.2 4,266,398 + CA264_18355 0.23 -0.6 4,266,399 - CA264_18355 0.24 +0.9 4,266,399 - CA264_18355 0.24 +0.4 4,266,420 - CA264_18355 0.30 +2.4 4,266,490 - CA264_18355 0.50 +1.6 4,266,551 - CA264_18355 0.68 -0.1
Or see this region's nucleotide sequence