Experiment: m.b. Cobalt chloride 0.15 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_18030 and CA264_18035 are separated by 109 nucleotides CA264_18035 and CA264_18040 are separated by 65 nucleotides CA264_18040 and CA264_18045 are separated by 569 nucleotides
CA264_18030: CA264_18030 - cation transporter, at 4,192,439 to 4,193,710
_18030
CA264_18035: CA264_18035 - alpha-ketoglutarate-dependent dioxygenase AlkB, at 4,193,820 to 4,194,410
_18035
CA264_18040: CA264_18040 - kynurenine 3-monooxygenase, at 4,194,476 to 4,195,843
_18040
CA264_18045: CA264_18045 - hypothetical protein, at 4,196,413 to 4,196,916
_18045
Position (kb)
4194
4195
4196 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 4193.522 kb on + strand, within CA264_18030 at 4193.542 kb on + strand, within CA264_18030 at 4193.584 kb on - strand at 4193.613 kb on + strand at 4193.613 kb on + strand at 4193.808 kb on + strand at 4193.809 kb on - strand at 4193.834 kb on - strand at 4193.907 kb on + strand, within CA264_18035 at 4193.908 kb on - strand, within CA264_18035 at 4193.933 kb on - strand, within CA264_18035 at 4193.953 kb on + strand, within CA264_18035 at 4193.954 kb on - strand, within CA264_18035 at 4194.021 kb on + strand, within CA264_18035 at 4194.021 kb on + strand, within CA264_18035 at 4194.022 kb on - strand, within CA264_18035 at 4194.108 kb on + strand, within CA264_18035 at 4194.109 kb on - strand, within CA264_18035 at 4194.200 kb on + strand, within CA264_18035 at 4194.302 kb on - strand, within CA264_18035 at 4194.350 kb on + strand, within CA264_18035 at 4194.351 kb on - strand, within CA264_18035 at 4194.445 kb on + strand at 4194.476 kb on - strand at 4194.540 kb on - strand at 4194.675 kb on + strand, within CA264_18040 at 4194.675 kb on + strand, within CA264_18040 at 4194.710 kb on + strand, within CA264_18040 at 4194.711 kb on - strand, within CA264_18040 at 4194.750 kb on - strand, within CA264_18040 at 4194.781 kb on - strand, within CA264_18040 at 4194.782 kb on + strand, within CA264_18040 at 4194.782 kb on + strand, within CA264_18040 at 4194.782 kb on + strand, within CA264_18040 at 4194.783 kb on - strand, within CA264_18040 at 4194.783 kb on - strand, within CA264_18040 at 4194.848 kb on - strand, within CA264_18040 at 4194.915 kb on + strand, within CA264_18040 at 4194.916 kb on - strand, within CA264_18040 at 4194.916 kb on - strand, within CA264_18040 at 4195.019 kb on + strand, within CA264_18040 at 4195.019 kb on + strand, within CA264_18040 at 4195.168 kb on + strand, within CA264_18040 at 4195.174 kb on + strand, within CA264_18040 at 4195.302 kb on - strand, within CA264_18040 at 4195.441 kb on + strand, within CA264_18040 at 4195.442 kb on - strand, within CA264_18040 at 4195.588 kb on - strand, within CA264_18040 at 4195.643 kb on + strand, within CA264_18040 at 4195.668 kb on - strand, within CA264_18040 at 4195.669 kb on + strand, within CA264_18040 at 4195.678 kb on + strand, within CA264_18040 at 4195.679 kb on - strand, within CA264_18040 at 4195.749 kb on + strand at 4195.771 kb on - strand at 4195.841 kb on + strand at 4195.841 kb on + strand at 4195.931 kb on + strand at 4195.931 kb on + strand at 4195.944 kb on - strand at 4195.967 kb on + strand at 4195.968 kb on - strand at 4196.102 kb on + strand at 4196.168 kb on + strand at 4196.168 kb on + strand at 4196.169 kb on - strand at 4196.169 kb on - strand at 4196.169 kb on - strand at 4196.169 kb on - strand at 4196.171 kb on - strand at 4196.180 kb on + strand at 4196.180 kb on + strand at 4196.181 kb on - strand at 4196.207 kb on - strand at 4196.225 kb on - strand at 4196.314 kb on - strand at 4196.346 kb on + strand at 4196.369 kb on - strand at 4196.370 kb on + strand at 4196.448 kb on - strand at 4196.448 kb on - strand at 4196.453 kb on + strand at 4196.454 kb on - strand at 4196.456 kb on + strand at 4196.456 kb on + strand at 4196.457 kb on - strand at 4196.457 kb on - strand at 4196.457 kb on - strand at 4196.457 kb on - strand at 4196.709 kb on - strand, within CA264_18045 at 4196.762 kb on + strand, within CA264_18045 at 4196.763 kb on - strand, within CA264_18045 at 4196.834 kb on - strand, within CA264_18045
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Cobalt chloride 0.15 mM remove 4,193,522 + CA264_18030 0.85 +0.0 4,193,542 + CA264_18030 0.87 +1.9 4,193,584 - +0.0 4,193,613 + -0.5 4,193,613 + +0.0 4,193,808 + -0.2 4,193,809 - +0.6 4,193,834 - +0.3 4,193,907 + CA264_18035 0.15 -0.2 4,193,908 - CA264_18035 0.15 +0.0 4,193,933 - CA264_18035 0.19 +0.2 4,193,953 + CA264_18035 0.23 -0.7 4,193,954 - CA264_18035 0.23 +0.3 4,194,021 + CA264_18035 0.34 +0.3 4,194,021 + CA264_18035 0.34 -0.3 4,194,022 - CA264_18035 0.34 +1.5 4,194,108 + CA264_18035 0.49 -0.2 4,194,109 - CA264_18035 0.49 -0.1 4,194,200 + CA264_18035 0.64 +0.1 4,194,302 - CA264_18035 0.82 -0.2 4,194,350 + CA264_18035 0.90 -0.7 4,194,351 - CA264_18035 0.90 +0.7 4,194,445 + +0.1 4,194,476 - -0.3 4,194,540 - -0.4 4,194,675 + CA264_18040 0.15 +0.4 4,194,675 + CA264_18040 0.15 +0.6 4,194,710 + CA264_18040 0.17 -0.4 4,194,711 - CA264_18040 0.17 +0.3 4,194,750 - CA264_18040 0.20 -1.2 4,194,781 - CA264_18040 0.22 +0.4 4,194,782 + CA264_18040 0.22 +0.6 4,194,782 + CA264_18040 0.22 +0.7 4,194,782 + CA264_18040 0.22 -0.5 4,194,783 - CA264_18040 0.22 -0.1 4,194,783 - CA264_18040 0.22 -1.3 4,194,848 - CA264_18040 0.27 -1.1 4,194,915 + CA264_18040 0.32 -0.2 4,194,916 - CA264_18040 0.32 -0.4 4,194,916 - CA264_18040 0.32 -0.7 4,195,019 + CA264_18040 0.40 -0.0 4,195,019 + CA264_18040 0.40 +2.0 4,195,168 + CA264_18040 0.51 +0.7 4,195,174 + CA264_18040 0.51 +0.2 4,195,302 - CA264_18040 0.60 -0.4 4,195,441 + CA264_18040 0.71 -0.0 4,195,442 - CA264_18040 0.71 -0.4 4,195,588 - CA264_18040 0.81 +1.1 4,195,643 + CA264_18040 0.85 +0.2 4,195,668 - CA264_18040 0.87 -0.1 4,195,669 + CA264_18040 0.87 -0.1 4,195,678 + CA264_18040 0.88 +0.7 4,195,679 - CA264_18040 0.88 -1.1 4,195,749 + -0.3 4,195,771 - -0.5 4,195,841 + -0.1 4,195,841 + -0.7 4,195,931 + -0.3 4,195,931 + -0.4 4,195,944 - -0.1 4,195,967 + +1.2 4,195,968 - -0.8 4,196,102 + -0.1 4,196,168 + -0.5 4,196,168 + -0.5 4,196,169 - +0.4 4,196,169 - -1.3 4,196,169 - +0.8 4,196,169 - -0.3 4,196,171 - +0.1 4,196,180 + -0.6 4,196,180 + -0.2 4,196,181 - -1.8 4,196,207 - -1.3 4,196,225 - -0.2 4,196,314 - -0.4 4,196,346 + -0.4 4,196,369 - +0.1 4,196,370 + -1.1 4,196,448 - +0.0 4,196,448 - -0.2 4,196,453 + -0.8 4,196,454 - +0.8 4,196,456 + -0.3 4,196,456 + -0.9 4,196,457 - -0.2 4,196,457 - +0.6 4,196,457 - -0.5 4,196,457 - -0.9 4,196,709 - CA264_18045 0.59 -1.0 4,196,762 + CA264_18045 0.69 -0.6 4,196,763 - CA264_18045 0.69 -0.3 4,196,834 - CA264_18045 0.84 -1.4
Or see this region's nucleotide sequence