Experiment: m.b. Cobalt chloride 0.15 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_17655 and CA264_17660 overlap by 4 nucleotides CA264_17660 and CA264_17665 are separated by 155 nucleotides CA264_17665 and CA264_17670 are separated by 297 nucleotides CA264_17670 and CA264_17675 are separated by 170 nucleotides
CA264_17655: CA264_17655 - hypothetical protein, at 4,110,012 to 4,110,605
_17655
CA264_17660: CA264_17660 - hypothetical protein, at 4,110,602 to 4,110,982
_17660
CA264_17665: CA264_17665 - molecular chaperone DnaJ, at 4,111,138 to 4,112,253
_17665
CA264_17670: CA264_17670 - tRNA-Phe, at 4,112,551 to 4,112,626
_17670
CA264_17675: CA264_17675 - Fe-S oxidoreductase, at 4,112,797 to 4,114,170
_17675
Position (kb)
4111
4112
4113 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 4110.142 kb on + strand, within CA264_17655 at 4110.142 kb on + strand, within CA264_17655 at 4110.150 kb on + strand, within CA264_17655 at 4110.151 kb on - strand, within CA264_17655 at 4110.200 kb on + strand, within CA264_17655 at 4110.200 kb on + strand, within CA264_17655 at 4110.304 kb on + strand, within CA264_17655 at 4110.605 kb on + strand at 4110.605 kb on + strand at 4110.606 kb on - strand at 4110.670 kb on + strand, within CA264_17660 at 4110.671 kb on - strand, within CA264_17660 at 4110.714 kb on - strand, within CA264_17660 at 4110.731 kb on + strand, within CA264_17660 at 4110.765 kb on - strand, within CA264_17660 at 4110.765 kb on - strand, within CA264_17660 at 4110.854 kb on + strand, within CA264_17660 at 4110.882 kb on - strand, within CA264_17660 at 4110.894 kb on - strand, within CA264_17660 at 4110.899 kb on - strand, within CA264_17660 at 4110.899 kb on - strand, within CA264_17660 at 4110.899 kb on - strand, within CA264_17660 at 4110.902 kb on + strand, within CA264_17660 at 4110.902 kb on + strand, within CA264_17660 at 4110.903 kb on - strand, within CA264_17660 at 4110.903 kb on - strand, within CA264_17660 at 4110.903 kb on - strand, within CA264_17660 at 4110.918 kb on + strand, within CA264_17660 at 4110.982 kb on + strand at 4111.023 kb on + strand at 4111.065 kb on - strand at 4111.084 kb on - strand at 4111.084 kb on - strand at 4111.106 kb on + strand at 4111.106 kb on + strand at 4111.153 kb on + strand at 4111.207 kb on + strand at 4111.208 kb on - strand at 4111.295 kb on - strand, within CA264_17665 at 4111.295 kb on - strand, within CA264_17665 at 4111.317 kb on + strand, within CA264_17665 at 4111.331 kb on - strand, within CA264_17665 at 4111.455 kb on + strand, within CA264_17665 at 4111.456 kb on - strand, within CA264_17665 at 4111.507 kb on - strand, within CA264_17665 at 4111.584 kb on + strand, within CA264_17665 at 4111.585 kb on - strand, within CA264_17665 at 4111.590 kb on + strand, within CA264_17665 at 4111.606 kb on + strand, within CA264_17665 at 4111.606 kb on + strand, within CA264_17665 at 4111.607 kb on - strand, within CA264_17665 at 4111.610 kb on + strand, within CA264_17665 at 4111.611 kb on - strand, within CA264_17665 at 4111.620 kb on + strand, within CA264_17665 at 4111.626 kb on + strand, within CA264_17665 at 4111.665 kb on + strand, within CA264_17665 at 4111.721 kb on - strand, within CA264_17665 at 4111.721 kb on - strand, within CA264_17665 at 4111.729 kb on + strand, within CA264_17665 at 4111.795 kb on + strand, within CA264_17665 at 4111.796 kb on - strand, within CA264_17665 at 4111.817 kb on - strand, within CA264_17665 at 4111.819 kb on - strand, within CA264_17665 at 4111.950 kb on + strand, within CA264_17665 at 4111.952 kb on + strand, within CA264_17665 at 4111.963 kb on - strand, within CA264_17665 at 4112.035 kb on + strand, within CA264_17665 at 4112.036 kb on - strand, within CA264_17665 at 4112.036 kb on - strand, within CA264_17665 at 4112.036 kb on - strand, within CA264_17665 at 4112.072 kb on - strand, within CA264_17665 at 4112.072 kb on - strand, within CA264_17665 at 4112.125 kb on + strand, within CA264_17665 at 4112.128 kb on + strand, within CA264_17665 at 4112.197 kb on + strand at 4112.223 kb on - strand at 4112.278 kb on - strand at 4112.278 kb on - strand at 4112.314 kb on + strand at 4112.319 kb on - strand at 4112.319 kb on - strand at 4112.336 kb on + strand at 4112.337 kb on - strand at 4112.394 kb on + strand at 4112.395 kb on - strand at 4112.395 kb on - strand at 4112.395 kb on - strand at 4112.398 kb on + strand at 4112.398 kb on + strand at 4112.398 kb on + strand at 4112.399 kb on - strand at 4112.399 kb on - strand at 4112.404 kb on + strand at 4112.405 kb on - strand at 4112.405 kb on - strand at 4112.405 kb on - strand at 4112.408 kb on + strand at 4112.410 kb on + strand at 4112.411 kb on - strand at 4112.411 kb on - strand at 4112.411 kb on - strand at 4112.416 kb on + strand at 4112.476 kb on - strand at 4112.509 kb on + strand at 4112.510 kb on - strand at 4112.730 kb on + strand at 4112.765 kb on + strand at 4112.766 kb on - strand at 4112.770 kb on - strand at 4112.772 kb on + strand at 4112.776 kb on + strand at 4112.776 kb on + strand at 4112.777 kb on - strand at 4112.802 kb on - strand at 4113.016 kb on + strand, within CA264_17675 at 4113.016 kb on + strand, within CA264_17675 at 4113.020 kb on + strand, within CA264_17675 at 4113.040 kb on - strand, within CA264_17675 at 4113.061 kb on - strand, within CA264_17675 at 4113.063 kb on - strand, within CA264_17675 at 4113.069 kb on + strand, within CA264_17675 at 4113.112 kb on + strand, within CA264_17675
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Cobalt chloride 0.15 mM remove 4,110,142 + CA264_17655 0.22 -0.6 4,110,142 + CA264_17655 0.22 -0.0 4,110,150 + CA264_17655 0.23 +0.3 4,110,151 - CA264_17655 0.23 -0.2 4,110,200 + CA264_17655 0.32 -1.1 4,110,200 + CA264_17655 0.32 +0.6 4,110,304 + CA264_17655 0.49 -0.5 4,110,605 + +0.1 4,110,605 + -0.6 4,110,606 - +0.3 4,110,670 + CA264_17660 0.18 +0.5 4,110,671 - CA264_17660 0.18 -0.0 4,110,714 - CA264_17660 0.29 -0.7 4,110,731 + CA264_17660 0.34 +0.7 4,110,765 - CA264_17660 0.43 +0.1 4,110,765 - CA264_17660 0.43 +0.1 4,110,854 + CA264_17660 0.66 -0.5 4,110,882 - CA264_17660 0.73 -0.1 4,110,894 - CA264_17660 0.77 +1.5 4,110,899 - CA264_17660 0.78 +0.7 4,110,899 - CA264_17660 0.78 +0.9 4,110,899 - CA264_17660 0.78 -0.2 4,110,902 + CA264_17660 0.79 -0.6 4,110,902 + CA264_17660 0.79 -0.3 4,110,903 - CA264_17660 0.79 -0.5 4,110,903 - CA264_17660 0.79 -0.4 4,110,903 - CA264_17660 0.79 +0.0 4,110,918 + CA264_17660 0.83 -0.3 4,110,982 + -1.0 4,111,023 + -1.9 4,111,065 - -0.5 4,111,084 - -1.0 4,111,084 - -1.2 4,111,106 + +0.1 4,111,106 + -1.0 4,111,153 + +0.1 4,111,207 + -0.7 4,111,208 - -0.1 4,111,295 - CA264_17665 0.14 -0.5 4,111,295 - CA264_17665 0.14 -0.3 4,111,317 + CA264_17665 0.16 -0.5 4,111,331 - CA264_17665 0.17 -0.1 4,111,455 + CA264_17665 0.28 +0.8 4,111,456 - CA264_17665 0.28 -0.9 4,111,507 - CA264_17665 0.33 +0.1 4,111,584 + CA264_17665 0.40 -0.5 4,111,585 - CA264_17665 0.40 -0.4 4,111,590 + CA264_17665 0.41 -0.8 4,111,606 + CA264_17665 0.42 +0.4 4,111,606 + CA264_17665 0.42 -0.5 4,111,607 - CA264_17665 0.42 -1.0 4,111,610 + CA264_17665 0.42 -0.0 4,111,611 - CA264_17665 0.42 -0.4 4,111,620 + CA264_17665 0.43 -0.9 4,111,626 + CA264_17665 0.44 +0.8 4,111,665 + CA264_17665 0.47 -0.8 4,111,721 - CA264_17665 0.52 +0.3 4,111,721 - CA264_17665 0.52 -0.4 4,111,729 + CA264_17665 0.53 -0.1 4,111,795 + CA264_17665 0.59 -0.6 4,111,796 - CA264_17665 0.59 -1.2 4,111,817 - CA264_17665 0.61 -1.8 4,111,819 - CA264_17665 0.61 -0.1 4,111,950 + CA264_17665 0.73 +0.7 4,111,952 + CA264_17665 0.73 +0.0 4,111,963 - CA264_17665 0.74 -0.5 4,112,035 + CA264_17665 0.80 -0.5 4,112,036 - CA264_17665 0.80 +1.1 4,112,036 - CA264_17665 0.80 -1.1 4,112,036 - CA264_17665 0.80 +0.1 4,112,072 - CA264_17665 0.84 -0.7 4,112,072 - CA264_17665 0.84 -0.9 4,112,125 + CA264_17665 0.88 -0.0 4,112,128 + CA264_17665 0.89 -0.4 4,112,197 + -0.8 4,112,223 - -0.5 4,112,278 - -1.2 4,112,278 - -0.0 4,112,314 + -0.1 4,112,319 - +0.1 4,112,319 - -0.0 4,112,336 + -0.4 4,112,337 - +1.4 4,112,394 + -0.4 4,112,395 - -1.8 4,112,395 - -0.2 4,112,395 - -0.3 4,112,398 + +0.1 4,112,398 + -1.9 4,112,398 + -0.2 4,112,399 - -0.7 4,112,399 - +0.7 4,112,404 + +0.8 4,112,405 - +0.3 4,112,405 - +0.2 4,112,405 - +0.7 4,112,408 + +2.4 4,112,410 + -0.3 4,112,411 - -0.5 4,112,411 - +0.6 4,112,411 - +0.1 4,112,416 + -1.6 4,112,476 - -0.4 4,112,509 + -0.5 4,112,510 - +1.4 4,112,730 + -0.8 4,112,765 + +0.6 4,112,766 - -0.1 4,112,770 - -0.1 4,112,772 + -1.2 4,112,776 + -0.4 4,112,776 + -0.1 4,112,777 - +1.1 4,112,802 - +0.8 4,113,016 + CA264_17675 0.16 -1.5 4,113,016 + CA264_17675 0.16 +2.0 4,113,020 + CA264_17675 0.16 -1.0 4,113,040 - CA264_17675 0.18 -0.5 4,113,061 - CA264_17675 0.19 +0.2 4,113,063 - CA264_17675 0.19 -0.3 4,113,069 + CA264_17675 0.20 +0.0 4,113,112 + CA264_17675 0.23 +0.3
Or see this region's nucleotide sequence