Experiment: m.b. Cobalt chloride 0.15 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_16640 and CA264_16645 are separated by 102 nucleotides CA264_16645 and CA264_16650 are separated by 65 nucleotides CA264_16650 and CA264_16655 are separated by 48 nucleotides
CA264_16640: CA264_16640 - twin-arginine translocation pathway signal, at 3,868,897 to 3,869,514
_16640
CA264_16645: CA264_16645 - peptidase C69, at 3,869,617 to 3,870,933
_16645
CA264_16650: CA264_16650 - four helix bundle protein, at 3,870,999 to 3,871,361
_16650
CA264_16655: CA264_16655 - TldD protein, at 3,871,410 to 3,873,056
_16655
Position (kb)
3869
3870
3871 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 3868.722 kb on + strand at 3868.722 kb on + strand at 3868.722 kb on + strand at 3868.723 kb on - strand at 3868.735 kb on - strand at 3868.735 kb on - strand at 3868.737 kb on + strand at 3868.737 kb on + strand at 3868.737 kb on + strand at 3868.738 kb on - strand at 3868.738 kb on - strand at 3868.741 kb on + strand at 3868.741 kb on + strand at 3868.741 kb on + strand at 3868.741 kb on + strand at 3868.742 kb on - strand at 3868.742 kb on - strand at 3868.748 kb on + strand at 3868.748 kb on + strand at 3868.778 kb on + strand at 3868.780 kb on + strand at 3868.780 kb on + strand at 3868.780 kb on + strand at 3868.781 kb on - strand at 3868.787 kb on - strand at 3868.906 kb on - strand at 3868.913 kb on + strand at 3868.913 kb on + strand at 3868.913 kb on + strand at 3868.913 kb on + strand at 3868.914 kb on - strand at 3868.917 kb on + strand at 3868.917 kb on + strand at 3868.917 kb on + strand at 3868.917 kb on + strand at 3868.939 kb on - strand at 3868.998 kb on - strand, within CA264_16640 at 3869.010 kb on + strand, within CA264_16640 at 3869.011 kb on - strand, within CA264_16640 at 3869.012 kb on + strand, within CA264_16640 at 3869.012 kb on + strand, within CA264_16640 at 3869.013 kb on - strand, within CA264_16640 at 3869.017 kb on + strand, within CA264_16640 at 3869.023 kb on + strand, within CA264_16640 at 3869.101 kb on - strand, within CA264_16640 at 3869.138 kb on + strand, within CA264_16640 at 3869.155 kb on - strand, within CA264_16640 at 3869.231 kb on - strand, within CA264_16640 at 3869.231 kb on - strand, within CA264_16640 at 3869.231 kb on - strand, within CA264_16640 at 3869.251 kb on + strand, within CA264_16640 at 3869.252 kb on - strand, within CA264_16640 at 3869.280 kb on - strand, within CA264_16640 at 3869.355 kb on + strand, within CA264_16640 at 3869.355 kb on + strand, within CA264_16640 at 3869.418 kb on - strand, within CA264_16640 at 3869.425 kb on - strand, within CA264_16640 at 3869.561 kb on - strand at 3869.588 kb on + strand at 3869.599 kb on + strand at 3869.603 kb on - strand at 3869.604 kb on + strand at 3869.604 kb on + strand at 3869.605 kb on - strand at 3869.605 kb on - strand at 3869.605 kb on - strand at 3869.608 kb on + strand at 3869.609 kb on - strand at 3869.609 kb on - strand at 3869.609 kb on - strand at 3869.609 kb on - strand at 3869.843 kb on - strand, within CA264_16645 at 3869.855 kb on + strand, within CA264_16645 at 3869.877 kb on + strand, within CA264_16645 at 3869.996 kb on + strand, within CA264_16645 at 3869.997 kb on - strand, within CA264_16645 at 3870.082 kb on + strand, within CA264_16645 at 3870.090 kb on + strand, within CA264_16645 at 3870.102 kb on - strand, within CA264_16645 at 3870.141 kb on + strand, within CA264_16645 at 3870.205 kb on - strand, within CA264_16645 at 3870.205 kb on - strand, within CA264_16645 at 3870.250 kb on + strand, within CA264_16645 at 3870.250 kb on + strand, within CA264_16645 at 3870.250 kb on + strand, within CA264_16645 at 3870.250 kb on + strand, within CA264_16645 at 3870.252 kb on + strand, within CA264_16645 at 3870.252 kb on + strand, within CA264_16645 at 3870.259 kb on - strand, within CA264_16645 at 3870.260 kb on + strand, within CA264_16645 at 3870.341 kb on - strand, within CA264_16645 at 3870.359 kb on + strand, within CA264_16645 at 3870.370 kb on + strand, within CA264_16645 at 3870.374 kb on + strand, within CA264_16645 at 3870.375 kb on - strand, within CA264_16645 at 3870.399 kb on + strand, within CA264_16645 at 3870.421 kb on + strand, within CA264_16645 at 3870.421 kb on + strand, within CA264_16645 at 3870.483 kb on + strand, within CA264_16645 at 3870.484 kb on - strand, within CA264_16645 at 3870.486 kb on - strand, within CA264_16645 at 3870.614 kb on + strand, within CA264_16645 at 3870.691 kb on - strand, within CA264_16645 at 3870.708 kb on + strand, within CA264_16645 at 3870.764 kb on - strand, within CA264_16645 at 3870.802 kb on + strand at 3870.803 kb on - strand at 3870.836 kb on - strand at 3870.894 kb on + strand at 3870.895 kb on - strand at 3870.922 kb on + strand at 3870.922 kb on + strand at 3870.922 kb on + strand at 3870.923 kb on - strand at 3870.926 kb on - strand at 3870.967 kb on + strand at 3870.973 kb on - strand at 3871.028 kb on + strand at 3871.035 kb on + strand at 3871.078 kb on - strand, within CA264_16650 at 3871.078 kb on - strand, within CA264_16650 at 3871.078 kb on - strand, within CA264_16650 at 3871.100 kb on + strand, within CA264_16650 at 3871.101 kb on - strand, within CA264_16650 at 3871.103 kb on + strand, within CA264_16650 at 3871.104 kb on - strand, within CA264_16650 at 3871.105 kb on + strand, within CA264_16650 at 3871.135 kb on + strand, within CA264_16650 at 3871.135 kb on + strand, within CA264_16650 at 3871.166 kb on + strand, within CA264_16650 at 3871.166 kb on + strand, within CA264_16650 at 3871.167 kb on - strand, within CA264_16650 at 3871.170 kb on + strand, within CA264_16650 at 3871.233 kb on - strand, within CA264_16650 at 3871.233 kb on - strand, within CA264_16650 at 3871.233 kb on - strand, within CA264_16650 at 3871.248 kb on + strand, within CA264_16650 at 3871.248 kb on + strand, within CA264_16650 at 3871.267 kb on - strand, within CA264_16650 at 3871.269 kb on - strand, within CA264_16650 at 3871.290 kb on + strand, within CA264_16650 at 3871.298 kb on + strand, within CA264_16650 at 3871.298 kb on + strand, within CA264_16650 at 3871.300 kb on + strand, within CA264_16650 at 3871.301 kb on - strand, within CA264_16650 at 3871.301 kb on - strand, within CA264_16650 at 3871.301 kb on - strand, within CA264_16650 at 3871.329 kb on - strand at 3871.331 kb on - strand at 3871.361 kb on + strand at 3871.364 kb on + strand at 3871.364 kb on + strand at 3871.364 kb on + strand at 3871.364 kb on + strand at 3871.365 kb on - strand at 3871.367 kb on - strand at 3871.367 kb on - strand at 3871.494 kb on - strand at 3871.535 kb on - strand at 3871.595 kb on - strand, within CA264_16655 at 3871.688 kb on + strand, within CA264_16655 at 3871.693 kb on + strand, within CA264_16655 at 3871.694 kb on - strand, within CA264_16655 at 3871.715 kb on - strand, within CA264_16655 at 3871.715 kb on - strand, within CA264_16655 at 3871.715 kb on - strand, within CA264_16655 at 3871.725 kb on - strand, within CA264_16655 at 3871.725 kb on - strand, within CA264_16655 at 3871.888 kb on + strand, within CA264_16655 at 3871.889 kb on - strand, within CA264_16655
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Cobalt chloride 0.15 mM remove 3,868,722 + -0.2 3,868,722 + +1.1 3,868,722 + -0.1 3,868,723 - -0.4 3,868,735 - +0.7 3,868,735 - -1.3 3,868,737 + -0.3 3,868,737 + +0.4 3,868,737 + +0.2 3,868,738 - -0.6 3,868,738 - -0.4 3,868,741 + +0.4 3,868,741 + +0.5 3,868,741 + -0.3 3,868,741 + +0.0 3,868,742 - -0.6 3,868,742 - -1.4 3,868,748 + +0.2 3,868,748 + -0.2 3,868,778 + -0.2 3,868,780 + +0.1 3,868,780 + +0.1 3,868,780 + +0.4 3,868,781 - -0.2 3,868,787 - -0.4 3,868,906 - -0.9 3,868,913 + -0.4 3,868,913 + +0.3 3,868,913 + +0.9 3,868,913 + -0.9 3,868,914 - -0.9 3,868,917 + +0.9 3,868,917 + -2.0 3,868,917 + +0.0 3,868,917 + +1.7 3,868,939 - +0.1 3,868,998 - CA264_16640 0.16 +0.2 3,869,010 + CA264_16640 0.18 -0.5 3,869,011 - CA264_16640 0.18 +1.2 3,869,012 + CA264_16640 0.19 -1.0 3,869,012 + CA264_16640 0.19 +0.1 3,869,013 - CA264_16640 0.19 +0.3 3,869,017 + CA264_16640 0.19 +0.3 3,869,023 + CA264_16640 0.20 +1.1 3,869,101 - CA264_16640 0.33 +0.8 3,869,138 + CA264_16640 0.39 -0.3 3,869,155 - CA264_16640 0.42 -0.1 3,869,231 - CA264_16640 0.54 +0.3 3,869,231 - CA264_16640 0.54 -0.5 3,869,231 - CA264_16640 0.54 +0.9 3,869,251 + CA264_16640 0.57 -0.3 3,869,252 - CA264_16640 0.57 -0.2 3,869,280 - CA264_16640 0.62 +0.1 3,869,355 + CA264_16640 0.74 +0.2 3,869,355 + CA264_16640 0.74 +0.4 3,869,418 - CA264_16640 0.84 +0.1 3,869,425 - CA264_16640 0.85 -0.7 3,869,561 - +0.2 3,869,588 + -0.1 3,869,599 + +0.2 3,869,603 - -0.7 3,869,604 + -1.8 3,869,604 + +1.0 3,869,605 - +0.3 3,869,605 - -0.1 3,869,605 - -0.3 3,869,608 + +0.2 3,869,609 - -0.7 3,869,609 - +0.0 3,869,609 - -0.6 3,869,609 - +0.2 3,869,843 - CA264_16645 0.17 -0.1 3,869,855 + CA264_16645 0.18 -1.3 3,869,877 + CA264_16645 0.20 +0.4 3,869,996 + CA264_16645 0.29 -0.3 3,869,997 - CA264_16645 0.29 -0.2 3,870,082 + CA264_16645 0.35 +1.2 3,870,090 + CA264_16645 0.36 +0.4 3,870,102 - CA264_16645 0.37 +1.4 3,870,141 + CA264_16645 0.40 +1.2 3,870,205 - CA264_16645 0.45 -0.0 3,870,205 - CA264_16645 0.45 -0.7 3,870,250 + CA264_16645 0.48 +0.1 3,870,250 + CA264_16645 0.48 +0.5 3,870,250 + CA264_16645 0.48 +0.5 3,870,250 + CA264_16645 0.48 +1.2 3,870,252 + CA264_16645 0.48 +0.3 3,870,252 + CA264_16645 0.48 +0.8 3,870,259 - CA264_16645 0.49 +0.1 3,870,260 + CA264_16645 0.49 +0.8 3,870,341 - CA264_16645 0.55 -0.7 3,870,359 + CA264_16645 0.56 -0.3 3,870,370 + CA264_16645 0.57 +0.2 3,870,374 + CA264_16645 0.57 -0.5 3,870,375 - CA264_16645 0.58 +0.1 3,870,399 + CA264_16645 0.59 -1.9 3,870,421 + CA264_16645 0.61 -0.0 3,870,421 + CA264_16645 0.61 -1.1 3,870,483 + CA264_16645 0.66 +0.1 3,870,484 - CA264_16645 0.66 -0.3 3,870,486 - CA264_16645 0.66 +2.2 3,870,614 + CA264_16645 0.76 -2.1 3,870,691 - CA264_16645 0.82 -0.2 3,870,708 + CA264_16645 0.83 +0.4 3,870,764 - CA264_16645 0.87 -1.1 3,870,802 + +1.2 3,870,803 - -0.4 3,870,836 - -1.3 3,870,894 + -0.1 3,870,895 - +0.2 3,870,922 + +1.2 3,870,922 + -1.9 3,870,922 + +2.4 3,870,923 - -0.2 3,870,926 - +0.6 3,870,967 + +0.1 3,870,973 - +0.5 3,871,028 + +0.3 3,871,035 + -0.2 3,871,078 - CA264_16650 0.22 -0.8 3,871,078 - CA264_16650 0.22 +2.0 3,871,078 - CA264_16650 0.22 +0.2 3,871,100 + CA264_16650 0.28 -0.2 3,871,101 - CA264_16650 0.28 -0.0 3,871,103 + CA264_16650 0.29 +0.3 3,871,104 - CA264_16650 0.29 -0.0 3,871,105 + CA264_16650 0.29 -0.0 3,871,135 + CA264_16650 0.37 -0.2 3,871,135 + CA264_16650 0.37 -0.1 3,871,166 + CA264_16650 0.46 +0.7 3,871,166 + CA264_16650 0.46 -0.1 3,871,167 - CA264_16650 0.46 -0.5 3,871,170 + CA264_16650 0.47 -0.2 3,871,233 - CA264_16650 0.64 +0.9 3,871,233 - CA264_16650 0.64 -0.1 3,871,233 - CA264_16650 0.64 +0.8 3,871,248 + CA264_16650 0.69 +1.2 3,871,248 + CA264_16650 0.69 -0.4 3,871,267 - CA264_16650 0.74 -0.8 3,871,269 - CA264_16650 0.74 +0.6 3,871,290 + CA264_16650 0.80 +0.2 3,871,298 + CA264_16650 0.82 +0.2 3,871,298 + CA264_16650 0.82 -0.4 3,871,300 + CA264_16650 0.83 +0.1 3,871,301 - CA264_16650 0.83 +0.7 3,871,301 - CA264_16650 0.83 -0.2 3,871,301 - CA264_16650 0.83 -0.1 3,871,329 - -2.0 3,871,331 - +0.4 3,871,361 + +0.3 3,871,364 + -0.6 3,871,364 + +0.7 3,871,364 + +0.5 3,871,364 + -0.4 3,871,365 - -0.3 3,871,367 - +1.0 3,871,367 - -0.1 3,871,494 - -1.4 3,871,535 - -0.3 3,871,595 - CA264_16655 0.11 +0.3 3,871,688 + CA264_16655 0.17 +0.4 3,871,693 + CA264_16655 0.17 +0.3 3,871,694 - CA264_16655 0.17 +1.7 3,871,715 - CA264_16655 0.19 -0.1 3,871,715 - CA264_16655 0.19 +0.0 3,871,715 - CA264_16655 0.19 -0.4 3,871,725 - CA264_16655 0.19 -1.3 3,871,725 - CA264_16655 0.19 -1.3 3,871,888 + CA264_16655 0.29 -0.3 3,871,889 - CA264_16655 0.29 +0.2
Or see this region's nucleotide sequence