Experiment: m.b. Cobalt chloride 0.15 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_16630 and CA264_16635 are separated by 595 nucleotides CA264_16635 and CA264_16640 are separated by 381 nucleotides
CA264_16630: CA264_16630 - DUF58 domain-containing protein, at 3,866,028 to 3,866,924
_16630
CA264_16635: CA264_16635 - AAA family ATPase, at 3,867,520 to 3,868,515
_16635
CA264_16640: CA264_16640 - twin-arginine translocation pathway signal, at 3,868,897 to 3,869,514
_16640
Position (kb)
3867
3868
3869 Strain fitness (log2 ratio)
-2
-1
0
1 at 3866.533 kb on + strand, within CA264_16630 at 3866.533 kb on + strand, within CA264_16630 at 3866.533 kb on + strand, within CA264_16630 at 3866.534 kb on - strand, within CA264_16630 at 3866.569 kb on + strand, within CA264_16630 at 3866.615 kb on + strand, within CA264_16630 at 3866.659 kb on - strand, within CA264_16630 at 3866.660 kb on + strand, within CA264_16630 at 3866.704 kb on + strand, within CA264_16630 at 3866.704 kb on + strand, within CA264_16630 at 3866.704 kb on + strand, within CA264_16630 at 3866.705 kb on - strand, within CA264_16630 at 3866.705 kb on - strand, within CA264_16630 at 3866.705 kb on - strand, within CA264_16630 at 3866.705 kb on - strand, within CA264_16630 at 3866.705 kb on - strand, within CA264_16630 at 3866.767 kb on + strand, within CA264_16630 at 3866.832 kb on - strand, within CA264_16630 at 3866.875 kb on - strand at 3866.937 kb on - strand at 3866.942 kb on - strand at 3866.949 kb on - strand at 3867.002 kb on + strand at 3867.033 kb on + strand at 3867.138 kb on + strand at 3867.138 kb on + strand at 3867.141 kb on + strand at 3867.142 kb on - strand at 3867.142 kb on - strand at 3867.142 kb on - strand at 3867.143 kb on + strand at 3867.144 kb on - strand at 3867.144 kb on - strand at 3867.146 kb on + strand at 3867.147 kb on - strand at 3867.148 kb on + strand at 3867.171 kb on + strand at 3867.187 kb on + strand at 3867.253 kb on - strand at 3867.453 kb on - strand at 3867.482 kb on + strand at 3867.521 kb on + strand at 3867.522 kb on - strand at 3867.527 kb on - strand at 3867.569 kb on - strand at 3867.655 kb on - strand, within CA264_16635 at 3867.658 kb on - strand, within CA264_16635 at 3867.671 kb on - strand, within CA264_16635 at 3867.671 kb on - strand, within CA264_16635 at 3867.688 kb on + strand, within CA264_16635 at 3867.715 kb on + strand, within CA264_16635 at 3867.715 kb on + strand, within CA264_16635 at 3867.715 kb on + strand, within CA264_16635 at 3867.715 kb on + strand, within CA264_16635 at 3867.716 kb on - strand, within CA264_16635 at 3867.716 kb on - strand, within CA264_16635 at 3867.716 kb on - strand, within CA264_16635 at 3867.716 kb on - strand, within CA264_16635 at 3867.718 kb on - strand, within CA264_16635 at 3867.718 kb on - strand, within CA264_16635 at 3867.718 kb on - strand, within CA264_16635 at 3867.759 kb on - strand, within CA264_16635 at 3867.776 kb on - strand, within CA264_16635 at 3867.817 kb on + strand, within CA264_16635 at 3867.821 kb on + strand, within CA264_16635 at 3867.821 kb on + strand, within CA264_16635 at 3867.822 kb on - strand, within CA264_16635 at 3867.822 kb on - strand, within CA264_16635 at 3867.825 kb on + strand, within CA264_16635 at 3867.825 kb on + strand, within CA264_16635 at 3867.825 kb on + strand, within CA264_16635 at 3867.825 kb on + strand, within CA264_16635 at 3867.825 kb on + strand, within CA264_16635 at 3867.825 kb on + strand, within CA264_16635 at 3867.825 kb on + strand, within CA264_16635 at 3867.826 kb on - strand, within CA264_16635 at 3867.847 kb on + strand, within CA264_16635 at 3867.847 kb on + strand, within CA264_16635 at 3867.848 kb on - strand, within CA264_16635 at 3867.904 kb on + strand, within CA264_16635 at 3867.927 kb on + strand, within CA264_16635 at 3867.931 kb on - strand, within CA264_16635 at 3867.937 kb on + strand, within CA264_16635 at 3867.940 kb on + strand, within CA264_16635 at 3867.941 kb on - strand, within CA264_16635 at 3867.946 kb on + strand, within CA264_16635 at 3867.947 kb on - strand, within CA264_16635 at 3867.947 kb on - strand, within CA264_16635 at 3867.947 kb on - strand, within CA264_16635 at 3867.968 kb on + strand, within CA264_16635 at 3867.983 kb on + strand, within CA264_16635 at 3867.989 kb on - strand, within CA264_16635 at 3867.989 kb on - strand, within CA264_16635 at 3868.023 kb on - strand, within CA264_16635 at 3868.023 kb on - strand, within CA264_16635 at 3868.100 kb on + strand, within CA264_16635 at 3868.100 kb on + strand, within CA264_16635 at 3868.100 kb on + strand, within CA264_16635 at 3868.100 kb on + strand, within CA264_16635 at 3868.101 kb on - strand, within CA264_16635 at 3868.101 kb on - strand, within CA264_16635 at 3868.101 kb on - strand, within CA264_16635 at 3868.113 kb on - strand, within CA264_16635 at 3868.189 kb on - strand, within CA264_16635 at 3868.193 kb on - strand, within CA264_16635 at 3868.198 kb on - strand, within CA264_16635 at 3868.267 kb on + strand, within CA264_16635 at 3868.268 kb on - strand, within CA264_16635 at 3868.301 kb on - strand, within CA264_16635 at 3868.423 kb on + strand at 3868.447 kb on + strand at 3868.456 kb on + strand at 3868.483 kb on - strand at 3868.499 kb on - strand at 3868.574 kb on - strand at 3868.574 kb on - strand at 3868.583 kb on + strand at 3868.583 kb on + strand at 3868.584 kb on - strand at 3868.585 kb on + strand at 3868.722 kb on + strand at 3868.722 kb on + strand at 3868.722 kb on + strand at 3868.723 kb on - strand at 3868.735 kb on - strand at 3868.735 kb on - strand at 3868.737 kb on + strand at 3868.737 kb on + strand at 3868.737 kb on + strand at 3868.738 kb on - strand at 3868.738 kb on - strand at 3868.741 kb on + strand at 3868.741 kb on + strand at 3868.741 kb on + strand at 3868.741 kb on + strand at 3868.742 kb on - strand at 3868.742 kb on - strand at 3868.748 kb on + strand at 3868.748 kb on + strand at 3868.778 kb on + strand at 3868.780 kb on + strand at 3868.780 kb on + strand at 3868.780 kb on + strand at 3868.781 kb on - strand at 3868.787 kb on - strand at 3868.906 kb on - strand at 3868.913 kb on + strand at 3868.913 kb on + strand at 3868.913 kb on + strand at 3868.913 kb on + strand at 3868.914 kb on - strand at 3868.917 kb on + strand at 3868.917 kb on + strand at 3868.917 kb on + strand at 3868.917 kb on + strand at 3868.939 kb on - strand at 3868.998 kb on - strand, within CA264_16640 at 3869.010 kb on + strand, within CA264_16640 at 3869.011 kb on - strand, within CA264_16640 at 3869.012 kb on + strand, within CA264_16640 at 3869.012 kb on + strand, within CA264_16640 at 3869.013 kb on - strand, within CA264_16640 at 3869.017 kb on + strand, within CA264_16640 at 3869.023 kb on + strand, within CA264_16640 at 3869.101 kb on - strand, within CA264_16640 at 3869.138 kb on + strand, within CA264_16640 at 3869.155 kb on - strand, within CA264_16640 at 3869.231 kb on - strand, within CA264_16640 at 3869.231 kb on - strand, within CA264_16640 at 3869.231 kb on - strand, within CA264_16640 at 3869.251 kb on + strand, within CA264_16640 at 3869.252 kb on - strand, within CA264_16640 at 3869.280 kb on - strand, within CA264_16640 at 3869.355 kb on + strand, within CA264_16640 at 3869.355 kb on + strand, within CA264_16640 at 3869.418 kb on - strand, within CA264_16640 at 3869.425 kb on - strand, within CA264_16640
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Cobalt chloride 0.15 mM remove 3,866,533 + CA264_16630 0.56 -0.2 3,866,533 + CA264_16630 0.56 +0.4 3,866,533 + CA264_16630 0.56 +0.3 3,866,534 - CA264_16630 0.56 +0.6 3,866,569 + CA264_16630 0.60 -2.5 3,866,615 + CA264_16630 0.65 +0.3 3,866,659 - CA264_16630 0.70 +0.1 3,866,660 + CA264_16630 0.70 +0.4 3,866,704 + CA264_16630 0.75 -1.4 3,866,704 + CA264_16630 0.75 -0.2 3,866,704 + CA264_16630 0.75 +0.4 3,866,705 - CA264_16630 0.75 +0.6 3,866,705 - CA264_16630 0.75 +0.3 3,866,705 - CA264_16630 0.75 -0.2 3,866,705 - CA264_16630 0.75 -0.0 3,866,705 - CA264_16630 0.75 -0.1 3,866,767 + CA264_16630 0.82 -1.9 3,866,832 - CA264_16630 0.90 +0.1 3,866,875 - -1.0 3,866,937 - +0.5 3,866,942 - -1.0 3,866,949 - -0.2 3,867,002 + -0.6 3,867,033 + -0.3 3,867,138 + -1.0 3,867,138 + -0.8 3,867,141 + +0.2 3,867,142 - -0.3 3,867,142 - +0.4 3,867,142 - +0.2 3,867,143 + +0.1 3,867,144 - +0.0 3,867,144 - -0.6 3,867,146 + +0.1 3,867,147 - +1.4 3,867,148 + -0.0 3,867,171 + -0.3 3,867,187 + -0.1 3,867,253 - +0.2 3,867,453 - -0.6 3,867,482 + -0.2 3,867,521 + -0.1 3,867,522 - +0.3 3,867,527 - +0.3 3,867,569 - +0.0 3,867,655 - CA264_16635 0.14 +0.0 3,867,658 - CA264_16635 0.14 -0.6 3,867,671 - CA264_16635 0.15 -0.1 3,867,671 - CA264_16635 0.15 +0.1 3,867,688 + CA264_16635 0.17 +0.3 3,867,715 + CA264_16635 0.20 -0.8 3,867,715 + CA264_16635 0.20 -0.2 3,867,715 + CA264_16635 0.20 +0.3 3,867,715 + CA264_16635 0.20 +0.1 3,867,716 - CA264_16635 0.20 +0.1 3,867,716 - CA264_16635 0.20 -0.7 3,867,716 - CA264_16635 0.20 -1.3 3,867,716 - CA264_16635 0.20 +0.6 3,867,718 - CA264_16635 0.20 +0.0 3,867,718 - CA264_16635 0.20 -0.2 3,867,718 - CA264_16635 0.20 +0.3 3,867,759 - CA264_16635 0.24 -1.4 3,867,776 - CA264_16635 0.26 +0.1 3,867,817 + CA264_16635 0.30 +0.4 3,867,821 + CA264_16635 0.30 -0.5 3,867,821 + CA264_16635 0.30 +0.5 3,867,822 - CA264_16635 0.30 +1.4 3,867,822 - CA264_16635 0.30 -0.1 3,867,825 + CA264_16635 0.31 +0.2 3,867,825 + CA264_16635 0.31 +0.1 3,867,825 + CA264_16635 0.31 -0.4 3,867,825 + CA264_16635 0.31 +0.2 3,867,825 + CA264_16635 0.31 -1.3 3,867,825 + CA264_16635 0.31 +0.6 3,867,825 + CA264_16635 0.31 -0.3 3,867,826 - CA264_16635 0.31 -1.9 3,867,847 + CA264_16635 0.33 -2.1 3,867,847 + CA264_16635 0.33 -0.1 3,867,848 - CA264_16635 0.33 +1.2 3,867,904 + CA264_16635 0.39 -0.6 3,867,927 + CA264_16635 0.41 -0.5 3,867,931 - CA264_16635 0.41 +0.3 3,867,937 + CA264_16635 0.42 +0.2 3,867,940 + CA264_16635 0.42 -1.4 3,867,941 - CA264_16635 0.42 -1.3 3,867,946 + CA264_16635 0.43 -0.1 3,867,947 - CA264_16635 0.43 -0.2 3,867,947 - CA264_16635 0.43 -1.3 3,867,947 - CA264_16635 0.43 -2.4 3,867,968 + CA264_16635 0.45 +0.4 3,867,983 + CA264_16635 0.46 -0.1 3,867,989 - CA264_16635 0.47 -0.7 3,867,989 - CA264_16635 0.47 -0.4 3,868,023 - CA264_16635 0.51 -0.3 3,868,023 - CA264_16635 0.51 -0.9 3,868,100 + CA264_16635 0.58 +0.9 3,868,100 + CA264_16635 0.58 -0.4 3,868,100 + CA264_16635 0.58 +0.6 3,868,100 + CA264_16635 0.58 -0.2 3,868,101 - CA264_16635 0.58 -0.4 3,868,101 - CA264_16635 0.58 -0.4 3,868,101 - CA264_16635 0.58 +0.4 3,868,113 - CA264_16635 0.60 -0.3 3,868,189 - CA264_16635 0.67 -0.2 3,868,193 - CA264_16635 0.68 -0.2 3,868,198 - CA264_16635 0.68 -0.3 3,868,267 + CA264_16635 0.75 +1.1 3,868,268 - CA264_16635 0.75 -0.8 3,868,301 - CA264_16635 0.78 +0.2 3,868,423 + -0.1 3,868,447 + -0.5 3,868,456 + -0.8 3,868,483 - +0.7 3,868,499 - -0.2 3,868,574 - +0.2 3,868,574 - -0.2 3,868,583 + +0.0 3,868,583 + +0.1 3,868,584 - -0.3 3,868,585 + +0.5 3,868,722 + -0.2 3,868,722 + +1.1 3,868,722 + -0.1 3,868,723 - -0.4 3,868,735 - +0.7 3,868,735 - -1.3 3,868,737 + -0.3 3,868,737 + +0.4 3,868,737 + +0.2 3,868,738 - -0.6 3,868,738 - -0.4 3,868,741 + +0.4 3,868,741 + +0.5 3,868,741 + -0.3 3,868,741 + +0.0 3,868,742 - -0.6 3,868,742 - -1.4 3,868,748 + +0.2 3,868,748 + -0.2 3,868,778 + -0.2 3,868,780 + +0.1 3,868,780 + +0.1 3,868,780 + +0.4 3,868,781 - -0.2 3,868,787 - -0.4 3,868,906 - -0.9 3,868,913 + -0.4 3,868,913 + +0.3 3,868,913 + +0.9 3,868,913 + -0.9 3,868,914 - -0.9 3,868,917 + +0.9 3,868,917 + -2.0 3,868,917 + +0.0 3,868,917 + +1.7 3,868,939 - +0.1 3,868,998 - CA264_16640 0.16 +0.2 3,869,010 + CA264_16640 0.18 -0.5 3,869,011 - CA264_16640 0.18 +1.2 3,869,012 + CA264_16640 0.19 -1.0 3,869,012 + CA264_16640 0.19 +0.1 3,869,013 - CA264_16640 0.19 +0.3 3,869,017 + CA264_16640 0.19 +0.3 3,869,023 + CA264_16640 0.20 +1.1 3,869,101 - CA264_16640 0.33 +0.8 3,869,138 + CA264_16640 0.39 -0.3 3,869,155 - CA264_16640 0.42 -0.1 3,869,231 - CA264_16640 0.54 +0.3 3,869,231 - CA264_16640 0.54 -0.5 3,869,231 - CA264_16640 0.54 +0.9 3,869,251 + CA264_16640 0.57 -0.3 3,869,252 - CA264_16640 0.57 -0.2 3,869,280 - CA264_16640 0.62 +0.1 3,869,355 + CA264_16640 0.74 +0.2 3,869,355 + CA264_16640 0.74 +0.4 3,869,418 - CA264_16640 0.84 +0.1 3,869,425 - CA264_16640 0.85 -0.7
Or see this region's nucleotide sequence