Experiment: m.b. Cobalt chloride 0.15 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_16265 and CA264_16270 are separated by 257 nucleotides CA264_16270 and CA264_16275 are separated by 64 nucleotides
CA264_16265: CA264_16265 - aminotransferase, at 3,783,088 to 3,784,329
_16265
CA264_16270: CA264_16270 - hypothetical protein, at 3,784,587 to 3,787,007
_16270
CA264_16275: CA264_16275 - PA-phosphatase, at 3,787,072 to 3,787,965
_16275
Position (kb)
3784
3785
3786
3787
3788 Strain fitness (log2 ratio)
-2
-1
0
1 at 3783.607 kb on - strand, within CA264_16265 at 3783.607 kb on - strand, within CA264_16265 at 3783.619 kb on + strand, within CA264_16265 at 3783.619 kb on + strand, within CA264_16265 at 3783.619 kb on + strand, within CA264_16265 at 3783.619 kb on + strand, within CA264_16265 at 3783.619 kb on + strand, within CA264_16265 at 3783.620 kb on - strand, within CA264_16265 at 3783.621 kb on + strand, within CA264_16265 at 3783.621 kb on + strand, within CA264_16265 at 3783.621 kb on + strand, within CA264_16265 at 3783.623 kb on + strand, within CA264_16265 at 3783.623 kb on + strand, within CA264_16265 at 3783.624 kb on - strand, within CA264_16265 at 3783.630 kb on + strand, within CA264_16265 at 3783.631 kb on - strand, within CA264_16265 at 3783.631 kb on - strand, within CA264_16265 at 3783.632 kb on + strand, within CA264_16265 at 3783.632 kb on + strand, within CA264_16265 at 3783.713 kb on + strand, within CA264_16265 at 3783.714 kb on - strand, within CA264_16265 at 3783.723 kb on - strand, within CA264_16265 at 3784.016 kb on + strand, within CA264_16265 at 3784.016 kb on + strand, within CA264_16265 at 3784.017 kb on - strand, within CA264_16265 at 3784.017 kb on - strand, within CA264_16265 at 3784.020 kb on + strand, within CA264_16265 at 3784.148 kb on + strand, within CA264_16265 at 3784.149 kb on - strand, within CA264_16265 at 3784.169 kb on + strand, within CA264_16265 at 3784.347 kb on + strand at 3784.348 kb on - strand at 3784.348 kb on - strand at 3784.348 kb on - strand at 3784.351 kb on + strand at 3784.352 kb on - strand at 3784.355 kb on - strand at 3784.362 kb on - strand at 3784.399 kb on + strand at 3784.427 kb on - strand at 3784.450 kb on + strand at 3784.451 kb on - strand at 3784.557 kb on - strand at 3784.561 kb on + strand at 3784.561 kb on + strand at 3784.563 kb on + strand at 3784.564 kb on - strand at 3784.564 kb on - strand at 3784.567 kb on + strand at 3784.567 kb on + strand at 3784.568 kb on - strand at 3784.568 kb on - strand at 3784.707 kb on - strand at 3784.850 kb on + strand, within CA264_16270 at 3784.851 kb on - strand, within CA264_16270 at 3784.851 kb on - strand, within CA264_16270 at 3784.894 kb on + strand, within CA264_16270 at 3784.895 kb on - strand, within CA264_16270 at 3784.898 kb on + strand, within CA264_16270 at 3784.949 kb on - strand, within CA264_16270 at 3784.950 kb on + strand, within CA264_16270 at 3784.950 kb on + strand, within CA264_16270 at 3784.951 kb on - strand, within CA264_16270 at 3784.951 kb on - strand, within CA264_16270 at 3784.951 kb on - strand, within CA264_16270 at 3784.969 kb on + strand, within CA264_16270 at 3784.970 kb on - strand, within CA264_16270 at 3784.987 kb on + strand, within CA264_16270 at 3784.988 kb on - strand, within CA264_16270 at 3785.086 kb on - strand, within CA264_16270 at 3785.092 kb on + strand, within CA264_16270 at 3785.092 kb on + strand, within CA264_16270 at 3785.092 kb on + strand, within CA264_16270 at 3785.093 kb on - strand, within CA264_16270 at 3785.093 kb on - strand, within CA264_16270 at 3785.102 kb on - strand, within CA264_16270 at 3785.102 kb on - strand, within CA264_16270 at 3785.108 kb on - strand, within CA264_16270 at 3785.143 kb on + strand, within CA264_16270 at 3785.143 kb on + strand, within CA264_16270 at 3785.210 kb on - strand, within CA264_16270 at 3785.210 kb on - strand, within CA264_16270 at 3785.227 kb on + strand, within CA264_16270 at 3785.387 kb on - strand, within CA264_16270 at 3785.420 kb on + strand, within CA264_16270 at 3785.526 kb on + strand, within CA264_16270 at 3785.528 kb on + strand, within CA264_16270 at 3785.597 kb on + strand, within CA264_16270 at 3785.660 kb on + strand, within CA264_16270 at 3785.941 kb on + strand, within CA264_16270 at 3785.942 kb on - strand, within CA264_16270 at 3785.942 kb on - strand, within CA264_16270 at 3786.142 kb on + strand, within CA264_16270 at 3786.143 kb on - strand, within CA264_16270 at 3786.143 kb on - strand, within CA264_16270 at 3786.286 kb on + strand, within CA264_16270 at 3786.319 kb on + strand, within CA264_16270 at 3786.320 kb on - strand, within CA264_16270 at 3786.563 kb on + strand, within CA264_16270 at 3786.568 kb on - strand, within CA264_16270 at 3786.569 kb on + strand, within CA264_16270 at 3786.570 kb on - strand, within CA264_16270 at 3786.570 kb on - strand, within CA264_16270 at 3786.580 kb on + strand, within CA264_16270 at 3786.590 kb on - strand, within CA264_16270 at 3786.590 kb on - strand, within CA264_16270 at 3786.593 kb on + strand, within CA264_16270 at 3786.594 kb on - strand, within CA264_16270 at 3786.733 kb on - strand, within CA264_16270 at 3786.733 kb on - strand, within CA264_16270 at 3786.734 kb on + strand, within CA264_16270 at 3786.734 kb on + strand, within CA264_16270 at 3786.735 kb on - strand, within CA264_16270 at 3786.781 kb on + strand at 3786.782 kb on - strand at 3786.782 kb on - strand at 3786.782 kb on - strand at 3786.786 kb on - strand at 3786.786 kb on - strand at 3786.952 kb on - strand at 3787.018 kb on + strand at 3787.018 kb on + strand at 3787.019 kb on - strand at 3787.068 kb on - strand at 3787.074 kb on - strand at 3787.141 kb on - strand at 3787.178 kb on + strand, within CA264_16275 at 3787.178 kb on + strand, within CA264_16275 at 3787.178 kb on + strand, within CA264_16275 at 3787.180 kb on + strand, within CA264_16275 at 3787.180 kb on + strand, within CA264_16275 at 3787.181 kb on - strand, within CA264_16275 at 3787.273 kb on - strand, within CA264_16275 at 3787.286 kb on + strand, within CA264_16275 at 3787.287 kb on - strand, within CA264_16275 at 3787.347 kb on + strand, within CA264_16275 at 3787.348 kb on - strand, within CA264_16275 at 3787.350 kb on + strand, within CA264_16275 at 3787.351 kb on - strand, within CA264_16275 at 3787.351 kb on - strand, within CA264_16275 at 3787.351 kb on - strand, within CA264_16275 at 3787.358 kb on + strand, within CA264_16275 at 3787.358 kb on + strand, within CA264_16275 at 3787.359 kb on - strand, within CA264_16275 at 3787.416 kb on + strand, within CA264_16275 at 3787.425 kb on + strand, within CA264_16275 at 3787.425 kb on + strand, within CA264_16275 at 3787.426 kb on - strand, within CA264_16275 at 3787.435 kb on + strand, within CA264_16275 at 3787.436 kb on - strand, within CA264_16275 at 3787.436 kb on - strand, within CA264_16275 at 3787.436 kb on - strand, within CA264_16275 at 3787.559 kb on + strand, within CA264_16275 at 3787.572 kb on + strand, within CA264_16275 at 3787.652 kb on + strand, within CA264_16275 at 3787.653 kb on - strand, within CA264_16275 at 3787.817 kb on - strand, within CA264_16275 at 3787.974 kb on + strand at 3787.975 kb on - strand at 3787.996 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Cobalt chloride 0.15 mM remove 3,783,607 - CA264_16265 0.42 +0.5 3,783,607 - CA264_16265 0.42 -1.3 3,783,619 + CA264_16265 0.43 -0.4 3,783,619 + CA264_16265 0.43 +0.4 3,783,619 + CA264_16265 0.43 -0.0 3,783,619 + CA264_16265 0.43 -0.3 3,783,619 + CA264_16265 0.43 -0.3 3,783,620 - CA264_16265 0.43 -0.5 3,783,621 + CA264_16265 0.43 +1.0 3,783,621 + CA264_16265 0.43 -1.5 3,783,621 + CA264_16265 0.43 +1.1 3,783,623 + CA264_16265 0.43 -1.1 3,783,623 + CA264_16265 0.43 -0.1 3,783,624 - CA264_16265 0.43 -0.4 3,783,630 + CA264_16265 0.44 -0.1 3,783,631 - CA264_16265 0.44 +0.2 3,783,631 - CA264_16265 0.44 +0.1 3,783,632 + CA264_16265 0.44 -0.1 3,783,632 + CA264_16265 0.44 -0.8 3,783,713 + CA264_16265 0.50 -0.7 3,783,714 - CA264_16265 0.50 +1.3 3,783,723 - CA264_16265 0.51 -0.2 3,784,016 + CA264_16265 0.75 -0.1 3,784,016 + CA264_16265 0.75 -0.9 3,784,017 - CA264_16265 0.75 -0.2 3,784,017 - CA264_16265 0.75 +0.6 3,784,020 + CA264_16265 0.75 -1.2 3,784,148 + CA264_16265 0.85 -1.3 3,784,149 - CA264_16265 0.85 +0.6 3,784,169 + CA264_16265 0.87 +1.4 3,784,347 + +0.9 3,784,348 - +1.0 3,784,348 - -0.1 3,784,348 - -0.2 3,784,351 + -0.3 3,784,352 - +0.1 3,784,355 - +0.1 3,784,362 - -1.1 3,784,399 + -1.4 3,784,427 - +0.6 3,784,450 + -1.5 3,784,451 - +0.9 3,784,557 - -1.7 3,784,561 + +0.0 3,784,561 + -0.2 3,784,563 + -2.0 3,784,564 - -0.5 3,784,564 - +0.0 3,784,567 + +1.4 3,784,567 + +0.4 3,784,568 - -0.5 3,784,568 - -0.1 3,784,707 - +0.8 3,784,850 + CA264_16270 0.11 +0.0 3,784,851 - CA264_16270 0.11 +0.7 3,784,851 - CA264_16270 0.11 -0.1 3,784,894 + CA264_16270 0.13 +1.2 3,784,895 - CA264_16270 0.13 -0.8 3,784,898 + CA264_16270 0.13 -0.5 3,784,949 - CA264_16270 0.15 +0.4 3,784,950 + CA264_16270 0.15 +0.2 3,784,950 + CA264_16270 0.15 +0.0 3,784,951 - CA264_16270 0.15 -0.6 3,784,951 - CA264_16270 0.15 -0.4 3,784,951 - CA264_16270 0.15 -0.2 3,784,969 + CA264_16270 0.16 -0.3 3,784,970 - CA264_16270 0.16 -1.3 3,784,987 + CA264_16270 0.17 +1.2 3,784,988 - CA264_16270 0.17 +0.0 3,785,086 - CA264_16270 0.21 -0.5 3,785,092 + CA264_16270 0.21 -0.3 3,785,092 + CA264_16270 0.21 -0.7 3,785,092 + CA264_16270 0.21 +0.9 3,785,093 - CA264_16270 0.21 -0.3 3,785,093 - CA264_16270 0.21 -0.2 3,785,102 - CA264_16270 0.21 +0.4 3,785,102 - CA264_16270 0.21 -0.2 3,785,108 - CA264_16270 0.22 +1.0 3,785,143 + CA264_16270 0.23 +0.2 3,785,143 + CA264_16270 0.23 -1.0 3,785,210 - CA264_16270 0.26 +0.7 3,785,210 - CA264_16270 0.26 -0.5 3,785,227 + CA264_16270 0.26 -1.2 3,785,387 - CA264_16270 0.33 -0.3 3,785,420 + CA264_16270 0.34 -0.7 3,785,526 + CA264_16270 0.39 -0.1 3,785,528 + CA264_16270 0.39 -0.1 3,785,597 + CA264_16270 0.42 -0.4 3,785,660 + CA264_16270 0.44 +0.0 3,785,941 + CA264_16270 0.56 +0.9 3,785,942 - CA264_16270 0.56 +0.7 3,785,942 - CA264_16270 0.56 -0.4 3,786,142 + CA264_16270 0.64 +0.1 3,786,143 - CA264_16270 0.64 -0.0 3,786,143 - CA264_16270 0.64 -0.1 3,786,286 + CA264_16270 0.70 +0.3 3,786,319 + CA264_16270 0.72 +0.4 3,786,320 - CA264_16270 0.72 -0.1 3,786,563 + CA264_16270 0.82 +1.1 3,786,568 - CA264_16270 0.82 -0.5 3,786,569 + CA264_16270 0.82 +1.0 3,786,570 - CA264_16270 0.82 +0.6 3,786,570 - CA264_16270 0.82 -1.6 3,786,580 + CA264_16270 0.82 -0.4 3,786,590 - CA264_16270 0.83 +0.8 3,786,590 - CA264_16270 0.83 -0.0 3,786,593 + CA264_16270 0.83 -0.1 3,786,594 - CA264_16270 0.83 -0.4 3,786,733 - CA264_16270 0.89 -0.7 3,786,733 - CA264_16270 0.89 -0.2 3,786,734 + CA264_16270 0.89 +1.0 3,786,734 + CA264_16270 0.89 +1.6 3,786,735 - CA264_16270 0.89 -0.4 3,786,781 + +0.7 3,786,782 - -1.5 3,786,782 - -0.2 3,786,782 - +0.1 3,786,786 - -1.3 3,786,786 - -0.4 3,786,952 - -0.4 3,787,018 + +1.2 3,787,018 + -0.1 3,787,019 - -0.3 3,787,068 - -0.6 3,787,074 - -0.1 3,787,141 - +0.5 3,787,178 + CA264_16275 0.12 +0.0 3,787,178 + CA264_16275 0.12 +0.4 3,787,178 + CA264_16275 0.12 +0.1 3,787,180 + CA264_16275 0.12 +0.1 3,787,180 + CA264_16275 0.12 -0.2 3,787,181 - CA264_16275 0.12 +0.2 3,787,273 - CA264_16275 0.22 -0.6 3,787,286 + CA264_16275 0.24 +0.0 3,787,287 - CA264_16275 0.24 -0.4 3,787,347 + CA264_16275 0.31 -0.2 3,787,348 - CA264_16275 0.31 +0.1 3,787,350 + CA264_16275 0.31 -0.2 3,787,351 - CA264_16275 0.31 -0.3 3,787,351 - CA264_16275 0.31 +0.2 3,787,351 - CA264_16275 0.31 -0.6 3,787,358 + CA264_16275 0.32 -0.1 3,787,358 + CA264_16275 0.32 +0.9 3,787,359 - CA264_16275 0.32 -0.3 3,787,416 + CA264_16275 0.38 -0.6 3,787,425 + CA264_16275 0.39 -0.3 3,787,425 + CA264_16275 0.39 -0.3 3,787,426 - CA264_16275 0.40 -0.6 3,787,435 + CA264_16275 0.41 +1.2 3,787,436 - CA264_16275 0.41 +0.3 3,787,436 - CA264_16275 0.41 -1.0 3,787,436 - CA264_16275 0.41 -0.2 3,787,559 + CA264_16275 0.54 -0.3 3,787,572 + CA264_16275 0.56 -0.2 3,787,652 + CA264_16275 0.65 +0.7 3,787,653 - CA264_16275 0.65 +0.9 3,787,817 - CA264_16275 0.83 -0.1 3,787,974 + -0.9 3,787,975 - -0.4 3,787,996 - -0.5
Or see this region's nucleotide sequence