Experiment: m.b. Cobalt chloride 0.15 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_16245 and CA264_16250 are separated by 629 nucleotides CA264_16250 and CA264_16255 are separated by 278 nucleotides
CA264_16245: CA264_16245 - hypothetical protein, at 3,778,979 to 3,779,602
_16245
CA264_16250: CA264_16250 - histone deacetylase, at 3,780,232 to 3,781,134
_16250
CA264_16255: CA264_16255 - hypothetical protein, at 3,781,413 to 3,782,366
_16255
Position (kb)
3780
3781
3782 Strain fitness (log2 ratio)
-2
-1
0
1 at 3779.233 kb on + strand, within CA264_16245 at 3779.234 kb on - strand, within CA264_16245 at 3779.411 kb on + strand, within CA264_16245 at 3779.411 kb on + strand, within CA264_16245 at 3779.471 kb on + strand, within CA264_16245 at 3779.472 kb on - strand, within CA264_16245 at 3779.472 kb on - strand, within CA264_16245 at 3779.523 kb on - strand, within CA264_16245 at 3779.567 kb on + strand at 3779.567 kb on + strand at 3779.568 kb on - strand at 3779.576 kb on - strand at 3779.587 kb on + strand at 3779.588 kb on - strand at 3779.588 kb on - strand at 3779.588 kb on - strand at 3779.603 kb on - strand at 3779.603 kb on - strand at 3779.631 kb on + strand at 3779.652 kb on - strand at 3779.660 kb on + strand at 3779.669 kb on + strand at 3779.675 kb on + strand at 3779.675 kb on + strand at 3779.676 kb on - strand at 3779.735 kb on + strand at 3779.735 kb on + strand at 3779.736 kb on - strand at 3779.765 kb on - strand at 3779.781 kb on - strand at 3780.045 kb on - strand at 3780.093 kb on - strand at 3780.213 kb on + strand at 3780.236 kb on + strand at 3780.305 kb on - strand at 3780.305 kb on - strand at 3780.331 kb on + strand, within CA264_16250 at 3780.331 kb on + strand, within CA264_16250 at 3780.346 kb on - strand, within CA264_16250 at 3780.511 kb on - strand, within CA264_16250 at 3780.511 kb on - strand, within CA264_16250 at 3780.665 kb on - strand, within CA264_16250 at 3780.667 kb on - strand, within CA264_16250 at 3780.667 kb on - strand, within CA264_16250 at 3780.785 kb on - strand, within CA264_16250 at 3780.850 kb on + strand, within CA264_16250 at 3780.851 kb on - strand, within CA264_16250 at 3780.948 kb on + strand, within CA264_16250 at 3780.949 kb on - strand, within CA264_16250 at 3781.043 kb on + strand, within CA264_16250 at 3781.061 kb on - strand at 3781.080 kb on + strand at 3781.081 kb on - strand at 3781.081 kb on - strand at 3781.081 kb on - strand at 3781.083 kb on + strand at 3781.083 kb on + strand at 3781.084 kb on - strand at 3781.085 kb on + strand at 3781.138 kb on - strand at 3781.298 kb on + strand at 3781.299 kb on - strand at 3781.299 kb on - strand at 3781.308 kb on + strand at 3781.678 kb on - strand, within CA264_16255 at 3781.684 kb on + strand, within CA264_16255
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Cobalt chloride 0.15 mM remove 3,779,233 + CA264_16245 0.41 -0.4 3,779,234 - CA264_16245 0.41 -0.4 3,779,411 + CA264_16245 0.69 -0.6 3,779,411 + CA264_16245 0.69 -0.5 3,779,471 + CA264_16245 0.79 -0.8 3,779,472 - CA264_16245 0.79 +0.1 3,779,472 - CA264_16245 0.79 +0.9 3,779,523 - CA264_16245 0.87 -1.4 3,779,567 + +0.8 3,779,567 + +0.3 3,779,568 - -1.3 3,779,576 - -0.2 3,779,587 + +0.5 3,779,588 - -0.2 3,779,588 - -0.5 3,779,588 - +0.4 3,779,603 - -1.0 3,779,603 - +0.1 3,779,631 + -0.4 3,779,652 - -0.3 3,779,660 + +0.2 3,779,669 + +0.2 3,779,675 + -0.0 3,779,675 + +0.1 3,779,676 - -0.4 3,779,735 + -0.3 3,779,735 + +0.0 3,779,736 - -0.6 3,779,765 - -0.2 3,779,781 - -0.8 3,780,045 - -1.3 3,780,093 - -1.9 3,780,213 + -1.1 3,780,236 + -0.3 3,780,305 - -0.3 3,780,305 - +1.0 3,780,331 + CA264_16250 0.11 -0.5 3,780,331 + CA264_16250 0.11 +0.1 3,780,346 - CA264_16250 0.13 -0.2 3,780,511 - CA264_16250 0.31 +0.8 3,780,511 - CA264_16250 0.31 +0.0 3,780,665 - CA264_16250 0.48 +0.7 3,780,667 - CA264_16250 0.48 +0.5 3,780,667 - CA264_16250 0.48 +1.4 3,780,785 - CA264_16250 0.61 +0.6 3,780,850 + CA264_16250 0.68 -0.1 3,780,851 - CA264_16250 0.69 +0.8 3,780,948 + CA264_16250 0.79 -0.6 3,780,949 - CA264_16250 0.79 -0.1 3,781,043 + CA264_16250 0.90 -0.2 3,781,061 - +0.4 3,781,080 + -0.3 3,781,081 - -0.8 3,781,081 - -0.4 3,781,081 - -0.2 3,781,083 + -0.8 3,781,083 + -0.0 3,781,084 - -0.2 3,781,085 + -0.4 3,781,138 - -0.1 3,781,298 + +0.0 3,781,299 - +0.2 3,781,299 - -0.6 3,781,308 + +0.5 3,781,678 - CA264_16255 0.28 +0.0 3,781,684 + CA264_16255 0.28 -0.6
Or see this region's nucleotide sequence