Experiment: m.b. Cobalt chloride 0.15 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_15675 and CA264_15680 are separated by 8 nucleotides CA264_15680 and CA264_15685 are separated by 3 nucleotides
CA264_15675: CA264_15675 - signal recognition particle-docking protein FtsY, at 3,659,657 to 3,660,616
_15675
CA264_15680: CA264_15680 - hypothetical protein, at 3,660,625 to 3,661,167
_15680
CA264_15685: CA264_15685 - 30S ribosomal protein S12 methylthiotransferase RimO, at 3,661,171 to 3,662,484
_15685
Position (kb)
3660
3661
3662 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 3659.641 kb on + strand at 3660.892 kb on + strand, within CA264_15680 at 3660.892 kb on + strand, within CA264_15680 at 3660.892 kb on + strand, within CA264_15680 at 3660.892 kb on + strand, within CA264_15680 at 3660.893 kb on - strand, within CA264_15680 at 3660.899 kb on - strand, within CA264_15680 at 3660.963 kb on + strand, within CA264_15680 at 3661.031 kb on - strand, within CA264_15680 at 3661.109 kb on + strand, within CA264_15680 at 3661.110 kb on - strand, within CA264_15680 at 3661.151 kb on - strand at 3661.162 kb on + strand at 3661.163 kb on - strand at 3661.165 kb on + strand at 3661.179 kb on - strand at 3661.197 kb on + strand at 3661.208 kb on + strand at 3661.209 kb on - strand at 3661.212 kb on + strand at 3661.212 kb on + strand at 3661.213 kb on - strand at 3661.213 kb on - strand at 3661.315 kb on - strand, within CA264_15685 at 3661.416 kb on - strand, within CA264_15685 at 3661.426 kb on + strand, within CA264_15685 at 3661.426 kb on + strand, within CA264_15685 at 3661.427 kb on - strand, within CA264_15685 at 3661.430 kb on + strand, within CA264_15685 at 3661.453 kb on + strand, within CA264_15685 at 3661.454 kb on - strand, within CA264_15685 at 3661.495 kb on + strand, within CA264_15685 at 3661.600 kb on + strand, within CA264_15685 at 3661.600 kb on + strand, within CA264_15685 at 3661.601 kb on - strand, within CA264_15685 at 3661.605 kb on + strand, within CA264_15685 at 3661.606 kb on - strand, within CA264_15685 at 3661.673 kb on + strand, within CA264_15685 at 3661.673 kb on + strand, within CA264_15685 at 3661.674 kb on - strand, within CA264_15685 at 3661.760 kb on + strand, within CA264_15685 at 3661.760 kb on + strand, within CA264_15685 at 3661.761 kb on - strand, within CA264_15685 at 3661.765 kb on + strand, within CA264_15685 at 3661.765 kb on + strand, within CA264_15685 at 3661.765 kb on + strand, within CA264_15685 at 3661.765 kb on + strand, within CA264_15685 at 3661.766 kb on - strand, within CA264_15685 at 3661.766 kb on - strand, within CA264_15685 at 3661.768 kb on + strand, within CA264_15685 at 3661.768 kb on + strand, within CA264_15685 at 3661.769 kb on - strand, within CA264_15685 at 3661.795 kb on - strand, within CA264_15685 at 3661.858 kb on + strand, within CA264_15685 at 3661.858 kb on + strand, within CA264_15685 at 3661.858 kb on + strand, within CA264_15685 at 3661.858 kb on + strand, within CA264_15685 at 3661.859 kb on - strand, within CA264_15685 at 3661.864 kb on + strand, within CA264_15685 at 3662.052 kb on - strand, within CA264_15685 at 3662.063 kb on + strand, within CA264_15685 at 3662.063 kb on + strand, within CA264_15685 at 3662.064 kb on - strand, within CA264_15685 at 3662.111 kb on - strand, within CA264_15685 at 3662.111 kb on - strand, within CA264_15685 at 3662.154 kb on + strand, within CA264_15685 at 3662.154 kb on + strand, within CA264_15685 at 3662.155 kb on - strand, within CA264_15685 at 3662.155 kb on - strand, within CA264_15685
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Cobalt chloride 0.15 mM remove 3,659,641 + -0.3 3,660,892 + CA264_15680 0.49 +0.8 3,660,892 + CA264_15680 0.49 +2.0 3,660,892 + CA264_15680 0.49 -1.1 3,660,892 + CA264_15680 0.49 +0.7 3,660,893 - CA264_15680 0.49 +0.5 3,660,899 - CA264_15680 0.50 +1.1 3,660,963 + CA264_15680 0.62 -0.1 3,661,031 - CA264_15680 0.75 -0.4 3,661,109 + CA264_15680 0.89 -0.2 3,661,110 - CA264_15680 0.89 -0.1 3,661,151 - -0.3 3,661,162 + +0.1 3,661,163 - -0.3 3,661,165 + +0.1 3,661,179 - +0.8 3,661,197 + -0.3 3,661,208 + -0.1 3,661,209 - +0.1 3,661,212 + -1.5 3,661,212 + +0.1 3,661,213 - +0.2 3,661,213 - +0.1 3,661,315 - CA264_15685 0.11 -0.8 3,661,416 - CA264_15685 0.19 -0.2 3,661,426 + CA264_15685 0.19 -0.0 3,661,426 + CA264_15685 0.19 -0.3 3,661,427 - CA264_15685 0.19 -0.4 3,661,430 + CA264_15685 0.20 -0.9 3,661,453 + CA264_15685 0.21 -0.5 3,661,454 - CA264_15685 0.22 +1.8 3,661,495 + CA264_15685 0.25 -1.1 3,661,600 + CA264_15685 0.33 -1.5 3,661,600 + CA264_15685 0.33 -0.1 3,661,601 - CA264_15685 0.33 -0.5 3,661,605 + CA264_15685 0.33 -0.5 3,661,606 - CA264_15685 0.33 -0.4 3,661,673 + CA264_15685 0.38 +0.1 3,661,673 + CA264_15685 0.38 +0.2 3,661,674 - CA264_15685 0.38 +0.8 3,661,760 + CA264_15685 0.45 -0.7 3,661,760 + CA264_15685 0.45 -0.9 3,661,761 - CA264_15685 0.45 +0.9 3,661,765 + CA264_15685 0.45 +0.1 3,661,765 + CA264_15685 0.45 -0.7 3,661,765 + CA264_15685 0.45 -0.5 3,661,765 + CA264_15685 0.45 -0.6 3,661,766 - CA264_15685 0.45 +1.1 3,661,766 - CA264_15685 0.45 +0.1 3,661,768 + CA264_15685 0.45 -0.4 3,661,768 + CA264_15685 0.45 +0.4 3,661,769 - CA264_15685 0.46 -0.5 3,661,795 - CA264_15685 0.47 -0.1 3,661,858 + CA264_15685 0.52 -1.3 3,661,858 + CA264_15685 0.52 -3.0 3,661,858 + CA264_15685 0.52 -1.0 3,661,858 + CA264_15685 0.52 -2.1 3,661,859 - CA264_15685 0.52 -0.4 3,661,864 + CA264_15685 0.53 +0.2 3,662,052 - CA264_15685 0.67 +0.4 3,662,063 + CA264_15685 0.68 -0.0 3,662,063 + CA264_15685 0.68 -0.2 3,662,064 - CA264_15685 0.68 +0.2 3,662,111 - CA264_15685 0.72 -0.3 3,662,111 - CA264_15685 0.72 -0.8 3,662,154 + CA264_15685 0.75 +0.0 3,662,154 + CA264_15685 0.75 +0.1 3,662,155 - CA264_15685 0.75 -0.1 3,662,155 - CA264_15685 0.75 +0.4
Or see this region's nucleotide sequence