Experiment: m.b. Cobalt chloride 0.15 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_14830 and CA264_14835 are separated by 107 nucleotides CA264_14835 and CA264_14840 are separated by 6 nucleotides
CA264_14830: CA264_14830 - DNA methyltransferase, at 3,480,804 to 3,484,007
_14830
CA264_14835: CA264_14835 - hypothetical protein, at 3,484,115 to 3,485,194
_14835
CA264_14840: CA264_14840 - hypothetical protein, at 3,485,201 to 3,486,928
_14840
Position (kb)
3484
3485
3486 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 3483.115 kb on + strand, within CA264_14830 at 3483.118 kb on + strand, within CA264_14830 at 3483.119 kb on - strand, within CA264_14830 at 3483.123 kb on + strand, within CA264_14830 at 3483.124 kb on - strand, within CA264_14830 at 3483.269 kb on + strand, within CA264_14830 at 3483.269 kb on + strand, within CA264_14830 at 3483.269 kb on + strand, within CA264_14830 at 3483.270 kb on - strand, within CA264_14830 at 3483.270 kb on - strand, within CA264_14830 at 3483.284 kb on - strand, within CA264_14830 at 3483.291 kb on - strand, within CA264_14830 at 3483.321 kb on + strand, within CA264_14830 at 3483.321 kb on + strand, within CA264_14830 at 3483.321 kb on + strand, within CA264_14830 at 3483.321 kb on + strand, within CA264_14830 at 3483.322 kb on - strand, within CA264_14830 at 3483.327 kb on - strand, within CA264_14830 at 3483.327 kb on - strand, within CA264_14830 at 3483.354 kb on + strand, within CA264_14830 at 3483.403 kb on + strand, within CA264_14830 at 3483.517 kb on + strand, within CA264_14830 at 3483.522 kb on + strand, within CA264_14830 at 3483.522 kb on + strand, within CA264_14830 at 3483.522 kb on + strand, within CA264_14830 at 3483.523 kb on - strand, within CA264_14830 at 3483.523 kb on - strand, within CA264_14830 at 3483.524 kb on + strand, within CA264_14830 at 3483.525 kb on - strand, within CA264_14830 at 3483.525 kb on - strand, within CA264_14830 at 3483.554 kb on + strand, within CA264_14830 at 3483.554 kb on + strand, within CA264_14830 at 3483.564 kb on + strand, within CA264_14830 at 3483.584 kb on - strand, within CA264_14830 at 3483.604 kb on - strand, within CA264_14830 at 3483.626 kb on + strand, within CA264_14830 at 3483.651 kb on - strand, within CA264_14830 at 3483.651 kb on - strand, within CA264_14830 at 3483.696 kb on + strand at 3483.696 kb on + strand at 3483.702 kb on - strand at 3483.753 kb on - strand at 3483.796 kb on + strand at 3483.797 kb on - strand at 3483.803 kb on - strand at 3483.877 kb on + strand at 3483.878 kb on - strand at 3483.893 kb on - strand at 3483.936 kb on - strand at 3483.952 kb on + strand at 3483.956 kb on + strand at 3483.957 kb on - strand at 3483.980 kb on + strand at 3484.020 kb on - strand at 3484.119 kb on + strand at 3484.123 kb on + strand at 3484.123 kb on + strand at 3484.123 kb on + strand at 3484.124 kb on - strand at 3484.124 kb on - strand at 3484.188 kb on - strand at 3484.188 kb on - strand at 3484.205 kb on + strand at 3484.206 kb on - strand at 3484.233 kb on - strand, within CA264_14835 at 3484.305 kb on + strand, within CA264_14835 at 3484.313 kb on + strand, within CA264_14835 at 3484.391 kb on - strand, within CA264_14835 at 3484.447 kb on - strand, within CA264_14835 at 3484.506 kb on + strand, within CA264_14835 at 3484.541 kb on - strand, within CA264_14835 at 3484.541 kb on - strand, within CA264_14835 at 3484.629 kb on + strand, within CA264_14835 at 3484.684 kb on - strand, within CA264_14835 at 3484.695 kb on + strand, within CA264_14835 at 3484.718 kb on - strand, within CA264_14835 at 3484.718 kb on - strand, within CA264_14835 at 3484.720 kb on - strand, within CA264_14835 at 3484.720 kb on - strand, within CA264_14835 at 3484.720 kb on - strand, within CA264_14835 at 3484.720 kb on - strand, within CA264_14835 at 3484.750 kb on + strand, within CA264_14835 at 3484.750 kb on + strand, within CA264_14835 at 3484.750 kb on + strand, within CA264_14835 at 3484.750 kb on + strand, within CA264_14835 at 3484.750 kb on + strand, within CA264_14835 at 3484.750 kb on + strand, within CA264_14835 at 3484.750 kb on + strand, within CA264_14835 at 3484.751 kb on - strand, within CA264_14835 at 3484.751 kb on - strand, within CA264_14835 at 3484.751 kb on - strand, within CA264_14835 at 3484.751 kb on - strand, within CA264_14835 at 3484.751 kb on - strand, within CA264_14835 at 3484.751 kb on - strand, within CA264_14835 at 3484.751 kb on - strand, within CA264_14835 at 3484.752 kb on + strand, within CA264_14835 at 3484.752 kb on + strand, within CA264_14835 at 3484.752 kb on + strand, within CA264_14835 at 3484.781 kb on + strand, within CA264_14835 at 3484.784 kb on - strand, within CA264_14835 at 3484.784 kb on - strand, within CA264_14835 at 3484.802 kb on - strand, within CA264_14835 at 3484.842 kb on + strand, within CA264_14835 at 3484.842 kb on + strand, within CA264_14835 at 3484.852 kb on + strand, within CA264_14835 at 3484.853 kb on - strand, within CA264_14835 at 3484.855 kb on - strand, within CA264_14835 at 3484.934 kb on - strand, within CA264_14835 at 3484.987 kb on - strand, within CA264_14835 at 3484.997 kb on - strand, within CA264_14835 at 3485.002 kb on - strand, within CA264_14835 at 3485.040 kb on + strand, within CA264_14835 at 3485.041 kb on - strand, within CA264_14835 at 3485.152 kb on + strand at 3485.153 kb on - strand at 3485.156 kb on + strand at 3485.156 kb on + strand at 3485.157 kb on - strand at 3485.180 kb on + strand at 3485.183 kb on - strand at 3485.195 kb on + strand at 3485.196 kb on - strand at 3485.221 kb on + strand at 3485.221 kb on + strand at 3485.222 kb on - strand at 3485.328 kb on + strand at 3485.328 kb on + strand at 3485.329 kb on - strand at 3485.332 kb on - strand at 3485.360 kb on - strand at 3485.360 kb on - strand at 3485.360 kb on - strand at 3485.360 kb on - strand at 3485.477 kb on - strand, within CA264_14840 at 3485.484 kb on + strand, within CA264_14840 at 3485.534 kb on - strand, within CA264_14840 at 3485.534 kb on - strand, within CA264_14840 at 3485.564 kb on + strand, within CA264_14840 at 3485.565 kb on - strand, within CA264_14840 at 3485.598 kb on + strand, within CA264_14840 at 3485.615 kb on + strand, within CA264_14840 at 3485.615 kb on + strand, within CA264_14840 at 3485.615 kb on + strand, within CA264_14840 at 3485.616 kb on - strand, within CA264_14840 at 3485.616 kb on - strand, within CA264_14840 at 3485.617 kb on + strand, within CA264_14840 at 3485.617 kb on + strand, within CA264_14840 at 3485.618 kb on - strand, within CA264_14840 at 3485.618 kb on - strand, within CA264_14840 at 3485.639 kb on - strand, within CA264_14840 at 3485.652 kb on - strand, within CA264_14840 at 3485.652 kb on - strand, within CA264_14840 at 3485.654 kb on + strand, within CA264_14840 at 3485.654 kb on + strand, within CA264_14840 at 3485.654 kb on + strand, within CA264_14840 at 3485.654 kb on + strand, within CA264_14840 at 3485.654 kb on + strand, within CA264_14840 at 3485.654 kb on + strand, within CA264_14840 at 3485.655 kb on - strand, within CA264_14840 at 3485.655 kb on - strand, within CA264_14840 at 3485.682 kb on - strand, within CA264_14840 at 3485.683 kb on + strand, within CA264_14840 at 3485.747 kb on + strand, within CA264_14840 at 3485.757 kb on + strand, within CA264_14840 at 3485.761 kb on - strand, within CA264_14840 at 3485.761 kb on - strand, within CA264_14840 at 3485.867 kb on - strand, within CA264_14840 at 3485.903 kb on - strand, within CA264_14840 at 3485.916 kb on - strand, within CA264_14840 at 3485.916 kb on - strand, within CA264_14840 at 3485.916 kb on - strand, within CA264_14840 at 3485.935 kb on + strand, within CA264_14840 at 3485.954 kb on - strand, within CA264_14840 at 3485.970 kb on - strand, within CA264_14840 at 3485.970 kb on - strand, within CA264_14840 at 3485.973 kb on + strand, within CA264_14840 at 3485.991 kb on + strand, within CA264_14840 at 3486.010 kb on + strand, within CA264_14840 at 3486.010 kb on + strand, within CA264_14840 at 3486.010 kb on + strand, within CA264_14840 at 3486.021 kb on + strand, within CA264_14840 at 3486.042 kb on + strand, within CA264_14840 at 3486.042 kb on + strand, within CA264_14840 at 3486.042 kb on + strand, within CA264_14840 at 3486.043 kb on - strand, within CA264_14840 at 3486.046 kb on + strand, within CA264_14840 at 3486.046 kb on + strand, within CA264_14840 at 3486.046 kb on + strand, within CA264_14840 at 3486.046 kb on + strand, within CA264_14840 at 3486.076 kb on + strand, within CA264_14840 at 3486.083 kb on - strand, within CA264_14840 at 3486.094 kb on - strand, within CA264_14840 at 3486.098 kb on - strand, within CA264_14840 at 3486.112 kb on + strand, within CA264_14840 at 3486.116 kb on + strand, within CA264_14840 at 3486.116 kb on + strand, within CA264_14840 at 3486.117 kb on - strand, within CA264_14840 at 3486.117 kb on - strand, within CA264_14840 at 3486.127 kb on - strand, within CA264_14840 at 3486.148 kb on + strand, within CA264_14840 at 3486.156 kb on + strand, within CA264_14840 at 3486.157 kb on - strand, within CA264_14840
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Cobalt chloride 0.15 mM remove 3,483,115 + CA264_14830 0.72 -0.2 3,483,118 + CA264_14830 0.72 +0.5 3,483,119 - CA264_14830 0.72 +0.5 3,483,123 + CA264_14830 0.72 +2.3 3,483,124 - CA264_14830 0.72 -1.1 3,483,269 + CA264_14830 0.77 -0.6 3,483,269 + CA264_14830 0.77 +0.7 3,483,269 + CA264_14830 0.77 -0.4 3,483,270 - CA264_14830 0.77 +1.2 3,483,270 - CA264_14830 0.77 -0.0 3,483,284 - CA264_14830 0.77 +0.0 3,483,291 - CA264_14830 0.78 -0.3 3,483,321 + CA264_14830 0.79 -0.3 3,483,321 + CA264_14830 0.79 -0.1 3,483,321 + CA264_14830 0.79 +0.3 3,483,321 + CA264_14830 0.79 +0.9 3,483,322 - CA264_14830 0.79 -0.5 3,483,327 - CA264_14830 0.79 +1.2 3,483,327 - CA264_14830 0.79 +0.7 3,483,354 + CA264_14830 0.80 +0.0 3,483,403 + CA264_14830 0.81 -0.0 3,483,517 + CA264_14830 0.85 -0.5 3,483,522 + CA264_14830 0.85 +1.3 3,483,522 + CA264_14830 0.85 -0.3 3,483,522 + CA264_14830 0.85 -0.0 3,483,523 - CA264_14830 0.85 -0.5 3,483,523 - CA264_14830 0.85 +0.2 3,483,524 + CA264_14830 0.85 +0.1 3,483,525 - CA264_14830 0.85 -0.3 3,483,525 - CA264_14830 0.85 +0.3 3,483,554 + CA264_14830 0.86 +0.1 3,483,554 + CA264_14830 0.86 +0.3 3,483,564 + CA264_14830 0.86 -0.3 3,483,584 - CA264_14830 0.87 +1.5 3,483,604 - CA264_14830 0.87 +0.0 3,483,626 + CA264_14830 0.88 +0.4 3,483,651 - CA264_14830 0.89 +0.0 3,483,651 - CA264_14830 0.89 -0.0 3,483,696 + -0.4 3,483,696 + +0.8 3,483,702 - -0.7 3,483,753 - -0.1 3,483,796 + -0.2 3,483,797 - -0.0 3,483,803 - -0.4 3,483,877 + -1.1 3,483,878 - +1.1 3,483,893 - +0.3 3,483,936 - -2.0 3,483,952 + +0.1 3,483,956 + -0.5 3,483,957 - -0.7 3,483,980 + -0.1 3,484,020 - +0.1 3,484,119 + +1.0 3,484,123 + -0.9 3,484,123 + -0.6 3,484,123 + -0.8 3,484,124 - -0.4 3,484,124 - -0.2 3,484,188 - +0.1 3,484,188 - +0.6 3,484,205 + +0.1 3,484,206 - -0.4 3,484,233 - CA264_14835 0.11 -0.9 3,484,305 + CA264_14835 0.18 -0.7 3,484,313 + CA264_14835 0.18 +0.4 3,484,391 - CA264_14835 0.26 +0.1 3,484,447 - CA264_14835 0.31 -0.1 3,484,506 + CA264_14835 0.36 -0.1 3,484,541 - CA264_14835 0.39 -0.2 3,484,541 - CA264_14835 0.39 +0.1 3,484,629 + CA264_14835 0.48 +0.2 3,484,684 - CA264_14835 0.53 -0.1 3,484,695 + CA264_14835 0.54 +0.4 3,484,718 - CA264_14835 0.56 -0.2 3,484,718 - CA264_14835 0.56 +1.6 3,484,720 - CA264_14835 0.56 +0.1 3,484,720 - CA264_14835 0.56 -0.0 3,484,720 - CA264_14835 0.56 -0.8 3,484,720 - CA264_14835 0.56 -0.5 3,484,750 + CA264_14835 0.59 -0.2 3,484,750 + CA264_14835 0.59 -2.2 3,484,750 + CA264_14835 0.59 +1.2 3,484,750 + CA264_14835 0.59 -0.6 3,484,750 + CA264_14835 0.59 -1.4 3,484,750 + CA264_14835 0.59 -0.1 3,484,750 + CA264_14835 0.59 -0.1 3,484,751 - CA264_14835 0.59 -0.9 3,484,751 - CA264_14835 0.59 -1.4 3,484,751 - CA264_14835 0.59 -0.2 3,484,751 - CA264_14835 0.59 +0.0 3,484,751 - CA264_14835 0.59 -0.1 3,484,751 - CA264_14835 0.59 +0.1 3,484,751 - CA264_14835 0.59 +0.5 3,484,752 + CA264_14835 0.59 +0.0 3,484,752 + CA264_14835 0.59 -0.2 3,484,752 + CA264_14835 0.59 -0.4 3,484,781 + CA264_14835 0.62 +0.4 3,484,784 - CA264_14835 0.62 -0.2 3,484,784 - CA264_14835 0.62 +1.3 3,484,802 - CA264_14835 0.64 -0.7 3,484,842 + CA264_14835 0.67 +0.2 3,484,842 + CA264_14835 0.67 -0.7 3,484,852 + CA264_14835 0.68 -0.4 3,484,853 - CA264_14835 0.68 -1.0 3,484,855 - CA264_14835 0.69 +1.0 3,484,934 - CA264_14835 0.76 -1.3 3,484,987 - CA264_14835 0.81 +0.2 3,484,997 - CA264_14835 0.82 +0.1 3,485,002 - CA264_14835 0.82 -0.1 3,485,040 + CA264_14835 0.86 -0.2 3,485,041 - CA264_14835 0.86 +0.1 3,485,152 + -0.3 3,485,153 - +0.1 3,485,156 + -1.5 3,485,156 + -0.3 3,485,157 - -1.0 3,485,180 + +0.7 3,485,183 - +0.7 3,485,195 + -0.3 3,485,196 - -0.7 3,485,221 + -0.0 3,485,221 + -0.3 3,485,222 - +0.2 3,485,328 + +0.5 3,485,328 + +0.3 3,485,329 - +0.3 3,485,332 - +0.2 3,485,360 - +0.3 3,485,360 - -0.4 3,485,360 - -0.5 3,485,360 - -0.6 3,485,477 - CA264_14840 0.16 +0.2 3,485,484 + CA264_14840 0.16 +0.5 3,485,534 - CA264_14840 0.19 -0.0 3,485,534 - CA264_14840 0.19 -1.3 3,485,564 + CA264_14840 0.21 -0.5 3,485,565 - CA264_14840 0.21 +0.3 3,485,598 + CA264_14840 0.23 -0.3 3,485,615 + CA264_14840 0.24 -0.4 3,485,615 + CA264_14840 0.24 -0.6 3,485,615 + CA264_14840 0.24 -0.0 3,485,616 - CA264_14840 0.24 -0.3 3,485,616 - CA264_14840 0.24 +0.7 3,485,617 + CA264_14840 0.24 -0.1 3,485,617 + CA264_14840 0.24 +0.6 3,485,618 - CA264_14840 0.24 +0.4 3,485,618 - CA264_14840 0.24 +0.7 3,485,639 - CA264_14840 0.25 -0.6 3,485,652 - CA264_14840 0.26 -0.2 3,485,652 - CA264_14840 0.26 -0.2 3,485,654 + CA264_14840 0.26 +0.2 3,485,654 + CA264_14840 0.26 +0.0 3,485,654 + CA264_14840 0.26 +0.3 3,485,654 + CA264_14840 0.26 +1.3 3,485,654 + CA264_14840 0.26 -0.1 3,485,654 + CA264_14840 0.26 -0.9 3,485,655 - CA264_14840 0.26 -0.5 3,485,655 - CA264_14840 0.26 +0.0 3,485,682 - CA264_14840 0.28 -0.2 3,485,683 + CA264_14840 0.28 -0.1 3,485,747 + CA264_14840 0.32 -1.1 3,485,757 + CA264_14840 0.32 -0.0 3,485,761 - CA264_14840 0.32 -0.4 3,485,761 - CA264_14840 0.32 +0.5 3,485,867 - CA264_14840 0.39 +0.2 3,485,903 - CA264_14840 0.41 +0.5 3,485,916 - CA264_14840 0.41 -0.0 3,485,916 - CA264_14840 0.41 +1.3 3,485,916 - CA264_14840 0.41 +0.5 3,485,935 + CA264_14840 0.42 -0.0 3,485,954 - CA264_14840 0.44 +0.2 3,485,970 - CA264_14840 0.45 +0.0 3,485,970 - CA264_14840 0.45 -0.5 3,485,973 + CA264_14840 0.45 -0.3 3,485,991 + CA264_14840 0.46 +0.1 3,486,010 + CA264_14840 0.47 -0.1 3,486,010 + CA264_14840 0.47 -0.2 3,486,010 + CA264_14840 0.47 -0.3 3,486,021 + CA264_14840 0.47 -0.0 3,486,042 + CA264_14840 0.49 -0.7 3,486,042 + CA264_14840 0.49 -0.6 3,486,042 + CA264_14840 0.49 +0.4 3,486,043 - CA264_14840 0.49 -0.2 3,486,046 + CA264_14840 0.49 +0.1 3,486,046 + CA264_14840 0.49 -0.7 3,486,046 + CA264_14840 0.49 -0.2 3,486,046 + CA264_14840 0.49 -1.5 3,486,076 + CA264_14840 0.51 -0.2 3,486,083 - CA264_14840 0.51 +0.1 3,486,094 - CA264_14840 0.52 +0.2 3,486,098 - CA264_14840 0.52 +0.5 3,486,112 + CA264_14840 0.53 +0.7 3,486,116 + CA264_14840 0.53 +0.1 3,486,116 + CA264_14840 0.53 +0.7 3,486,117 - CA264_14840 0.53 +0.0 3,486,117 - CA264_14840 0.53 -0.3 3,486,127 - CA264_14840 0.54 +0.2 3,486,148 + CA264_14840 0.55 +0.4 3,486,156 + CA264_14840 0.55 +0.1 3,486,157 - CA264_14840 0.55 +0.3
Or see this region's nucleotide sequence