Experiment: m.b. Cobalt chloride 0.15 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_13405 and CA264_13410 overlap by 4 nucleotides CA264_13410 and CA264_13415 are separated by 596 nucleotides
CA264_13405: CA264_13405 - NAD-dependent dehydratase, at 3,126,410 to 3,127,378
_13405
CA264_13410: CA264_13410 - UDP-glucose 6-dehydrogenase, at 3,127,375 to 3,128,733
_13410
CA264_13415: CA264_13415 - alpha/beta hydrolase, at 3,129,330 to 3,130,223
_13415
Position (kb)
3127
3128
3129 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1
2 at 3126.397 kb on + strand at 3126.397 kb on + strand at 3126.400 kb on + strand at 3126.400 kb on + strand at 3126.408 kb on - strand at 3126.408 kb on - strand at 3126.433 kb on + strand at 3126.434 kb on - strand at 3126.679 kb on - strand, within CA264_13405 at 3126.679 kb on - strand, within CA264_13405 at 3126.727 kb on - strand, within CA264_13405 at 3126.810 kb on - strand, within CA264_13405 at 3126.843 kb on + strand, within CA264_13405 at 3126.894 kb on + strand, within CA264_13405 at 3126.895 kb on - strand, within CA264_13405 at 3126.895 kb on - strand, within CA264_13405 at 3126.937 kb on - strand, within CA264_13405 at 3126.975 kb on + strand, within CA264_13405 at 3127.011 kb on + strand, within CA264_13405 at 3127.165 kb on - strand, within CA264_13405 at 3127.165 kb on - strand, within CA264_13405 at 3127.212 kb on + strand, within CA264_13405 at 3127.213 kb on - strand, within CA264_13405 at 3127.249 kb on + strand, within CA264_13405 at 3127.297 kb on - strand at 3128.752 kb on - strand at 3128.752 kb on - strand at 3128.752 kb on - strand at 3128.757 kb on + strand at 3128.757 kb on + strand at 3128.758 kb on - strand at 3128.758 kb on - strand at 3128.759 kb on + strand at 3128.762 kb on + strand at 3128.763 kb on - strand at 3128.832 kb on - strand at 3128.846 kb on - strand at 3128.851 kb on - strand at 3128.851 kb on - strand at 3128.873 kb on + strand at 3128.874 kb on - strand at 3128.878 kb on - strand at 3128.889 kb on + strand at 3128.889 kb on - strand at 3128.982 kb on - strand at 3128.982 kb on - strand at 3129.052 kb on - strand at 3129.101 kb on - strand at 3129.101 kb on - strand at 3129.120 kb on + strand at 3129.123 kb on + strand at 3129.141 kb on - strand at 3129.194 kb on - strand at 3129.199 kb on - strand at 3129.269 kb on + strand at 3129.270 kb on - strand at 3129.300 kb on - strand at 3129.302 kb on - strand at 3129.307 kb on - strand at 3129.329 kb on + strand at 3129.361 kb on - strand at 3129.374 kb on + strand at 3129.375 kb on - strand at 3129.379 kb on - strand at 3129.408 kb on + strand at 3129.409 kb on - strand at 3129.410 kb on + strand at 3129.412 kb on + strand at 3129.412 kb on + strand at 3129.412 kb on + strand at 3129.412 kb on + strand at 3129.413 kb on - strand at 3129.413 kb on - strand at 3129.489 kb on - strand, within CA264_13415 at 3129.571 kb on - strand, within CA264_13415 at 3129.626 kb on - strand, within CA264_13415 at 3129.646 kb on + strand, within CA264_13415 at 3129.647 kb on - strand, within CA264_13415 at 3129.679 kb on - strand, within CA264_13415
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Cobalt chloride 0.15 mM remove 3,126,397 + -2.7 3,126,397 + +1.7 3,126,400 + -0.1 3,126,400 + -0.2 3,126,408 - -0.0 3,126,408 - -1.1 3,126,433 + +0.8 3,126,434 - +0.4 3,126,679 - CA264_13405 0.28 -3.8 3,126,679 - CA264_13405 0.28 -3.5 3,126,727 - CA264_13405 0.33 -3.6 3,126,810 - CA264_13405 0.41 -1.4 3,126,843 + CA264_13405 0.45 -3.2 3,126,894 + CA264_13405 0.50 -2.6 3,126,895 - CA264_13405 0.50 -3.8 3,126,895 - CA264_13405 0.50 -0.4 3,126,937 - CA264_13405 0.54 -1.6 3,126,975 + CA264_13405 0.58 -2.2 3,127,011 + CA264_13405 0.62 -1.9 3,127,165 - CA264_13405 0.78 -1.2 3,127,165 - CA264_13405 0.78 -3.4 3,127,212 + CA264_13405 0.83 -1.0 3,127,213 - CA264_13405 0.83 -2.5 3,127,249 + CA264_13405 0.87 -1.9 3,127,297 - -3.6 3,128,752 - -0.5 3,128,752 - +0.5 3,128,752 - +0.3 3,128,757 + -0.2 3,128,757 + -1.2 3,128,758 - -0.7 3,128,758 - -0.3 3,128,759 + +0.4 3,128,762 + -0.8 3,128,763 - -0.5 3,128,832 - -0.0 3,128,846 - -1.2 3,128,851 - +0.2 3,128,851 - -0.1 3,128,873 + +0.2 3,128,874 - -0.2 3,128,878 - +0.3 3,128,889 + -1.0 3,128,889 - +0.2 3,128,982 - -0.3 3,128,982 - -0.3 3,129,052 - +0.5 3,129,101 - -0.4 3,129,101 - +0.9 3,129,120 + +0.2 3,129,123 + -0.1 3,129,141 - +0.2 3,129,194 - -0.3 3,129,199 - +0.4 3,129,269 + +0.7 3,129,270 - -0.7 3,129,300 - +2.3 3,129,302 - -0.1 3,129,307 - +0.2 3,129,329 + -0.5 3,129,361 - +0.0 3,129,374 + -0.7 3,129,375 - -2.4 3,129,379 - -1.2 3,129,408 + -0.1 3,129,409 - -0.5 3,129,410 + +1.0 3,129,412 + -0.1 3,129,412 + +0.6 3,129,412 + -0.7 3,129,412 + +1.0 3,129,413 - -0.2 3,129,413 - -1.2 3,129,489 - CA264_13415 0.18 +0.4 3,129,571 - CA264_13415 0.27 +0.6 3,129,626 - CA264_13415 0.33 -0.7 3,129,646 + CA264_13415 0.35 -0.5 3,129,647 - CA264_13415 0.35 -0.3 3,129,679 - CA264_13415 0.39 -0.1
Or see this region's nucleotide sequence