Experiment: m.b. Cobalt chloride 0.15 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_13390 and CA264_13395 are separated by 275 nucleotides CA264_13395 and CA264_13400 are separated by 111 nucleotides
CA264_13390: CA264_13390 - sodium-translocating pyrophosphatase, at 3,121,509 to 3,123,773
_13390
CA264_13395: CA264_13395 - aminopeptidase, at 3,124,049 to 3,124,963
_13395
CA264_13400: CA264_13400 - tol-pal system protein YbgF, at 3,125,075 to 3,126,322
_13400
Position (kb)
3124
3125 Strain fitness (log2 ratio)
-1
0
1
2 at 3123.129 kb on - strand, within CA264_13390 at 3123.138 kb on + strand, within CA264_13390 at 3123.139 kb on - strand, within CA264_13390 at 3123.213 kb on + strand, within CA264_13390 at 3123.213 kb on + strand, within CA264_13390 at 3123.216 kb on - strand, within CA264_13390 at 3123.324 kb on - strand, within CA264_13390 at 3123.376 kb on - strand, within CA264_13390 at 3123.401 kb on + strand, within CA264_13390 at 3123.477 kb on - strand, within CA264_13390 at 3123.527 kb on + strand, within CA264_13390 at 3123.553 kb on + strand at 3123.554 kb on - strand at 3123.722 kb on - strand at 3123.800 kb on - strand at 3123.800 kb on - strand at 3123.806 kb on - strand at 3123.806 kb on - strand at 3123.808 kb on - strand at 3123.814 kb on - strand at 3123.947 kb on + strand at 3123.999 kb on + strand at 3124.000 kb on - strand at 3124.075 kb on - strand at 3124.088 kb on - strand at 3124.088 kb on - strand at 3124.152 kb on - strand, within CA264_13395 at 3124.234 kb on - strand, within CA264_13395 at 3124.274 kb on + strand, within CA264_13395 at 3124.274 kb on + strand, within CA264_13395 at 3124.278 kb on + strand, within CA264_13395 at 3124.278 kb on + strand, within CA264_13395 at 3124.358 kb on - strand, within CA264_13395 at 3124.358 kb on - strand, within CA264_13395 at 3124.404 kb on + strand, within CA264_13395 at 3124.404 kb on + strand, within CA264_13395 at 3124.405 kb on - strand, within CA264_13395 at 3124.463 kb on - strand, within CA264_13395 at 3124.614 kb on + strand, within CA264_13395 at 3124.614 kb on + strand, within CA264_13395 at 3124.614 kb on + strand, within CA264_13395 at 3124.614 kb on + strand, within CA264_13395 at 3124.614 kb on + strand, within CA264_13395 at 3124.615 kb on - strand, within CA264_13395 at 3124.615 kb on - strand, within CA264_13395 at 3124.651 kb on + strand, within CA264_13395 at 3124.651 kb on + strand, within CA264_13395 at 3124.693 kb on - strand, within CA264_13395 at 3124.884 kb on + strand at 3124.889 kb on + strand at 3125.018 kb on + strand at 3125.028 kb on - strand at 3125.030 kb on + strand at 3125.049 kb on + strand at 3125.056 kb on + strand at 3125.056 kb on + strand at 3125.056 kb on + strand at 3125.057 kb on - strand at 3125.057 kb on - strand at 3125.072 kb on + strand at 3125.072 kb on + strand at 3125.127 kb on + strand at 3125.127 kb on + strand at 3125.128 kb on - strand at 3125.175 kb on + strand at 3125.176 kb on - strand at 3125.196 kb on + strand at 3125.217 kb on + strand, within CA264_13400 at 3125.217 kb on + strand, within CA264_13400 at 3125.283 kb on - strand, within CA264_13400 at 3125.283 kb on - strand, within CA264_13400 at 3125.283 kb on - strand, within CA264_13400 at 3125.283 kb on - strand, within CA264_13400 at 3125.295 kb on - strand, within CA264_13400 at 3125.392 kb on - strand, within CA264_13400 at 3125.442 kb on - strand, within CA264_13400 at 3125.456 kb on - strand, within CA264_13400 at 3125.477 kb on + strand, within CA264_13400 at 3125.478 kb on - strand, within CA264_13400 at 3125.529 kb on - strand, within CA264_13400 at 3125.679 kb on - strand, within CA264_13400 at 3125.708 kb on - strand, within CA264_13400 at 3125.708 kb on - strand, within CA264_13400 at 3125.812 kb on + strand, within CA264_13400 at 3125.893 kb on + strand, within CA264_13400 at 3125.893 kb on + strand, within CA264_13400 at 3125.897 kb on + strand, within CA264_13400 at 3125.897 kb on + strand, within CA264_13400 at 3125.912 kb on + strand, within CA264_13400 at 3125.927 kb on + strand, within CA264_13400 at 3125.928 kb on - strand, within CA264_13400 at 3125.946 kb on + strand, within CA264_13400
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Cobalt chloride 0.15 mM remove 3,123,129 - CA264_13390 0.72 -0.2 3,123,138 + CA264_13390 0.72 -0.2 3,123,139 - CA264_13390 0.72 -0.1 3,123,213 + CA264_13390 0.75 +0.1 3,123,213 + CA264_13390 0.75 -0.0 3,123,216 - CA264_13390 0.75 -0.0 3,123,324 - CA264_13390 0.80 -0.6 3,123,376 - CA264_13390 0.82 -0.3 3,123,401 + CA264_13390 0.84 +0.1 3,123,477 - CA264_13390 0.87 +0.2 3,123,527 + CA264_13390 0.89 +0.4 3,123,553 + -0.3 3,123,554 - +1.0 3,123,722 - +0.4 3,123,800 - -0.3 3,123,800 - -0.1 3,123,806 - +0.9 3,123,806 - +0.8 3,123,808 - -0.2 3,123,814 - -0.3 3,123,947 + +0.2 3,123,999 + -0.8 3,124,000 - +0.6 3,124,075 - +1.1 3,124,088 - +0.0 3,124,088 - -1.4 3,124,152 - CA264_13395 0.11 -0.2 3,124,234 - CA264_13395 0.20 -0.8 3,124,274 + CA264_13395 0.25 +0.2 3,124,274 + CA264_13395 0.25 -1.7 3,124,278 + CA264_13395 0.25 +0.0 3,124,278 + CA264_13395 0.25 +0.0 3,124,358 - CA264_13395 0.34 +1.1 3,124,358 - CA264_13395 0.34 +1.3 3,124,404 + CA264_13395 0.39 +0.4 3,124,404 + CA264_13395 0.39 -0.3 3,124,405 - CA264_13395 0.39 -0.3 3,124,463 - CA264_13395 0.45 +0.2 3,124,614 + CA264_13395 0.62 +0.2 3,124,614 + CA264_13395 0.62 -0.0 3,124,614 + CA264_13395 0.62 -0.0 3,124,614 + CA264_13395 0.62 -0.6 3,124,614 + CA264_13395 0.62 +0.3 3,124,615 - CA264_13395 0.62 +0.0 3,124,615 - CA264_13395 0.62 +0.9 3,124,651 + CA264_13395 0.66 +1.1 3,124,651 + CA264_13395 0.66 +0.2 3,124,693 - CA264_13395 0.70 +0.7 3,124,884 + +1.0 3,124,889 + -0.1 3,125,018 + -0.0 3,125,028 - -0.3 3,125,030 + -0.4 3,125,049 + +1.1 3,125,056 + -1.0 3,125,056 + -1.0 3,125,056 + -0.3 3,125,057 - +0.3 3,125,057 - +0.2 3,125,072 + +2.0 3,125,072 + +1.9 3,125,127 + -0.3 3,125,127 + -0.2 3,125,128 - +0.5 3,125,175 + -1.5 3,125,176 - +1.3 3,125,196 + +1.8 3,125,217 + CA264_13400 0.11 +0.2 3,125,217 + CA264_13400 0.11 -0.3 3,125,283 - CA264_13400 0.17 -0.5 3,125,283 - CA264_13400 0.17 -1.0 3,125,283 - CA264_13400 0.17 -1.3 3,125,283 - CA264_13400 0.17 -0.1 3,125,295 - CA264_13400 0.18 +1.3 3,125,392 - CA264_13400 0.25 -1.0 3,125,442 - CA264_13400 0.29 +1.3 3,125,456 - CA264_13400 0.31 +0.1 3,125,477 + CA264_13400 0.32 -0.1 3,125,478 - CA264_13400 0.32 +0.0 3,125,529 - CA264_13400 0.36 +0.2 3,125,679 - CA264_13400 0.48 -0.0 3,125,708 - CA264_13400 0.51 -0.3 3,125,708 - CA264_13400 0.51 -0.2 3,125,812 + CA264_13400 0.59 +0.6 3,125,893 + CA264_13400 0.66 -0.1 3,125,893 + CA264_13400 0.66 +1.3 3,125,897 + CA264_13400 0.66 -1.5 3,125,897 + CA264_13400 0.66 -0.1 3,125,912 + CA264_13400 0.67 +0.6 3,125,927 + CA264_13400 0.68 -0.4 3,125,928 - CA264_13400 0.68 -0.9 3,125,946 + CA264_13400 0.70 -0.5
Or see this region's nucleotide sequence