Experiment: m.b. Cobalt chloride 0.15 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_12620 and CA264_12625 are separated by 116 nucleotides CA264_12625 and CA264_12630 are separated by 169 nucleotides CA264_12630 and CA264_12635 are separated by 0 nucleotides
CA264_12620: CA264_12620 - cytochrome C, at 2,945,665 to 2,946,663
_12620
CA264_12625: CA264_12625 - RDD family protein, at 2,946,780 to 2,947,250
_12625
CA264_12630: CA264_12630 - RDD family protein, at 2,947,420 to 2,947,851
_12630
CA264_12635: CA264_12635 - hypothetical protein, at 2,947,852 to 2,949,132
_12635
Position (kb)
2947
2948 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2946.487 kb on + strand, within CA264_12620 at 2946.487 kb on + strand, within CA264_12620 at 2946.595 kb on + strand at 2946.602 kb on - strand at 2946.602 kb on - strand at 2946.622 kb on - strand at 2946.645 kb on + strand at 2946.689 kb on + strand at 2946.690 kb on - strand at 2946.690 kb on - strand at 2946.751 kb on + strand at 2946.751 kb on + strand at 2946.774 kb on - strand at 2946.774 kb on - strand at 2946.774 kb on - strand at 2946.776 kb on + strand at 2946.776 kb on + strand at 2946.776 kb on + strand at 2946.829 kb on - strand, within CA264_12625 at 2946.996 kb on + strand, within CA264_12625 at 2947.139 kb on + strand, within CA264_12625 at 2947.139 kb on + strand, within CA264_12625 at 2947.212 kb on - strand at 2947.248 kb on + strand at 2947.249 kb on - strand at 2947.275 kb on - strand at 2947.313 kb on + strand at 2947.330 kb on + strand at 2947.336 kb on - strand at 2947.339 kb on + strand at 2947.339 kb on + strand at 2947.339 kb on + strand at 2947.339 kb on + strand at 2947.339 kb on + strand at 2947.340 kb on - strand at 2947.372 kb on - strand at 2947.383 kb on + strand at 2947.389 kb on + strand at 2947.419 kb on + strand at 2947.433 kb on - strand at 2947.433 kb on - strand at 2947.469 kb on + strand, within CA264_12630 at 2947.524 kb on - strand, within CA264_12630 at 2947.540 kb on + strand, within CA264_12630 at 2947.541 kb on - strand, within CA264_12630 at 2947.614 kb on - strand, within CA264_12630 at 2947.615 kb on + strand, within CA264_12630 at 2947.850 kb on - strand at 2947.878 kb on - strand at 2947.940 kb on + strand at 2947.940 kb on + strand at 2947.941 kb on - strand at 2947.941 kb on - strand at 2947.945 kb on + strand at 2947.945 kb on + strand at 2947.946 kb on - strand at 2947.946 kb on - strand at 2947.946 kb on - strand at 2947.946 kb on - strand at 2947.948 kb on - strand at 2947.981 kb on + strand, within CA264_12635 at 2948.001 kb on - strand, within CA264_12635 at 2948.006 kb on + strand, within CA264_12635 at 2948.052 kb on + strand, within CA264_12635 at 2948.065 kb on + strand, within CA264_12635 at 2948.066 kb on - strand, within CA264_12635 at 2948.080 kb on + strand, within CA264_12635 at 2948.081 kb on - strand, within CA264_12635 at 2948.121 kb on + strand, within CA264_12635 at 2948.223 kb on + strand, within CA264_12635 at 2948.231 kb on + strand, within CA264_12635 at 2948.232 kb on - strand, within CA264_12635 at 2948.238 kb on + strand, within CA264_12635 at 2948.238 kb on + strand, within CA264_12635 at 2948.264 kb on - strand, within CA264_12635 at 2948.269 kb on + strand, within CA264_12635 at 2948.269 kb on + strand, within CA264_12635 at 2948.270 kb on - strand, within CA264_12635 at 2948.270 kb on - strand, within CA264_12635 at 2948.275 kb on - strand, within CA264_12635 at 2948.400 kb on + strand, within CA264_12635 at 2948.431 kb on - strand, within CA264_12635 at 2948.474 kb on - strand, within CA264_12635 at 2948.580 kb on + strand, within CA264_12635 at 2948.598 kb on - strand, within CA264_12635 at 2948.683 kb on + strand, within CA264_12635 at 2948.697 kb on + strand, within CA264_12635 at 2948.698 kb on - strand, within CA264_12635 at 2948.745 kb on - strand, within CA264_12635 at 2948.759 kb on + strand, within CA264_12635
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Cobalt chloride 0.15 mM remove 2,946,487 + CA264_12620 0.82 -1.1 2,946,487 + CA264_12620 0.82 +0.9 2,946,595 + -0.2 2,946,602 - -0.2 2,946,602 - -1.3 2,946,622 - -1.1 2,946,645 + -0.0 2,946,689 + -0.3 2,946,690 - +0.1 2,946,690 - -1.5 2,946,751 + -0.3 2,946,751 + -1.8 2,946,774 - -0.2 2,946,774 - +0.9 2,946,774 - +0.1 2,946,776 + -0.1 2,946,776 + -0.3 2,946,776 + -0.7 2,946,829 - CA264_12625 0.10 +0.9 2,946,996 + CA264_12625 0.46 +1.1 2,947,139 + CA264_12625 0.76 +1.1 2,947,139 + CA264_12625 0.76 -0.0 2,947,212 - -0.3 2,947,248 + -1.5 2,947,249 - -0.5 2,947,275 - +0.2 2,947,313 + -0.1 2,947,330 + +1.2 2,947,336 - -0.0 2,947,339 + +0.3 2,947,339 + -0.9 2,947,339 + +0.0 2,947,339 + -0.4 2,947,339 + +0.7 2,947,340 - +0.1 2,947,372 - -0.6 2,947,383 + -0.2 2,947,389 + -0.3 2,947,419 + -1.0 2,947,433 - +0.0 2,947,433 - -1.0 2,947,469 + CA264_12630 0.11 -0.4 2,947,524 - CA264_12630 0.24 -0.3 2,947,540 + CA264_12630 0.28 -0.3 2,947,541 - CA264_12630 0.28 -0.5 2,947,614 - CA264_12630 0.45 +0.4 2,947,615 + CA264_12630 0.45 +0.5 2,947,850 - -0.5 2,947,878 - +1.7 2,947,940 + +0.9 2,947,940 + -0.1 2,947,941 - -0.3 2,947,941 - -0.3 2,947,945 + +0.6 2,947,945 + -0.4 2,947,946 - -0.9 2,947,946 - -0.1 2,947,946 - -1.3 2,947,946 - -0.6 2,947,948 - -0.3 2,947,981 + CA264_12635 0.10 +1.0 2,948,001 - CA264_12635 0.12 +0.9 2,948,006 + CA264_12635 0.12 -0.9 2,948,052 + CA264_12635 0.16 +0.1 2,948,065 + CA264_12635 0.17 +0.5 2,948,066 - CA264_12635 0.17 -0.2 2,948,080 + CA264_12635 0.18 -0.7 2,948,081 - CA264_12635 0.18 -0.2 2,948,121 + CA264_12635 0.21 -0.2 2,948,223 + CA264_12635 0.29 +0.2 2,948,231 + CA264_12635 0.30 +0.8 2,948,232 - CA264_12635 0.30 -0.6 2,948,238 + CA264_12635 0.30 +1.3 2,948,238 + CA264_12635 0.30 -0.6 2,948,264 - CA264_12635 0.32 +1.5 2,948,269 + CA264_12635 0.33 -0.2 2,948,269 + CA264_12635 0.33 +0.2 2,948,270 - CA264_12635 0.33 +1.4 2,948,270 - CA264_12635 0.33 +0.1 2,948,275 - CA264_12635 0.33 +0.4 2,948,400 + CA264_12635 0.43 -0.7 2,948,431 - CA264_12635 0.45 -0.7 2,948,474 - CA264_12635 0.49 -0.1 2,948,580 + CA264_12635 0.57 +1.8 2,948,598 - CA264_12635 0.58 -0.9 2,948,683 + CA264_12635 0.65 -0.3 2,948,697 + CA264_12635 0.66 -0.7 2,948,698 - CA264_12635 0.66 -0.5 2,948,745 - CA264_12635 0.70 +0.2 2,948,759 + CA264_12635 0.71 +0.7
Or see this region's nucleotide sequence