Experiment: m.b. Cobalt chloride 0.15 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_12605 and CA264_12610 are separated by 328 nucleotides CA264_12610 and CA264_12615 are separated by 45 nucleotides
CA264_12605: CA264_12605 - stress protection protein MarC, at 2,941,449 to 2,942,069
_12605
CA264_12610: CA264_12610 - hypothetical protein, at 2,942,398 to 2,943,756
_12610
CA264_12615: CA264_12615 - peptidase M16, at 2,943,802 to 2,945,442
_12615
Position (kb)
2942
2943
2944 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2941.410 kb on - strand at 2941.414 kb on - strand at 2941.440 kb on + strand at 2941.458 kb on - strand at 2941.458 kb on - strand at 2941.582 kb on + strand, within CA264_12605 at 2941.582 kb on + strand, within CA264_12605 at 2941.584 kb on + strand, within CA264_12605 at 2941.585 kb on - strand, within CA264_12605 at 2941.585 kb on - strand, within CA264_12605 at 2941.626 kb on + strand, within CA264_12605 at 2941.627 kb on - strand, within CA264_12605 at 2941.838 kb on + strand, within CA264_12605 at 2941.840 kb on + strand, within CA264_12605 at 2941.841 kb on - strand, within CA264_12605 at 2941.900 kb on + strand, within CA264_12605 at 2941.900 kb on + strand, within CA264_12605 at 2941.901 kb on - strand, within CA264_12605 at 2941.920 kb on + strand, within CA264_12605 at 2941.949 kb on + strand, within CA264_12605 at 2942.003 kb on + strand, within CA264_12605 at 2942.129 kb on + strand at 2942.130 kb on - strand at 2942.132 kb on + strand at 2942.132 kb on + strand at 2942.133 kb on - strand at 2942.133 kb on - strand at 2942.144 kb on + strand at 2942.144 kb on + strand at 2942.149 kb on + strand at 2942.150 kb on - strand at 2942.152 kb on + strand at 2942.262 kb on + strand at 2942.289 kb on + strand at 2942.344 kb on + strand at 2942.344 kb on + strand at 2942.344 kb on + strand at 2942.344 kb on + strand at 2942.345 kb on - strand at 2942.346 kb on + strand at 2942.352 kb on + strand at 2942.352 kb on + strand at 2942.353 kb on - strand at 2942.353 kb on - strand at 2942.353 kb on - strand at 2942.353 kb on - strand at 2942.353 kb on - strand at 2942.353 kb on - strand at 2942.353 kb on - strand at 2942.354 kb on + strand at 2942.354 kb on + strand at 2942.354 kb on + strand at 2942.354 kb on + strand at 2942.354 kb on + strand at 2942.355 kb on - strand at 2942.355 kb on - strand at 2942.355 kb on - strand at 2942.355 kb on - strand at 2942.372 kb on - strand at 2942.386 kb on - strand at 2942.411 kb on + strand at 2942.548 kb on + strand, within CA264_12610 at 2942.549 kb on - strand, within CA264_12610 at 2942.549 kb on - strand, within CA264_12610 at 2942.575 kb on + strand, within CA264_12610 at 2942.575 kb on + strand, within CA264_12610 at 2942.575 kb on + strand, within CA264_12610 at 2942.575 kb on + strand, within CA264_12610 at 2942.575 kb on + strand, within CA264_12610 at 2942.575 kb on + strand, within CA264_12610 at 2942.576 kb on - strand, within CA264_12610 at 2942.577 kb on + strand, within CA264_12610 at 2942.582 kb on + strand, within CA264_12610 at 2942.675 kb on - strand, within CA264_12610 at 2942.914 kb on + strand, within CA264_12610 at 2942.953 kb on + strand, within CA264_12610 at 2942.954 kb on - strand, within CA264_12610 at 2943.007 kb on + strand, within CA264_12610 at 2943.041 kb on - strand, within CA264_12610 at 2943.052 kb on + strand, within CA264_12610 at 2943.115 kb on + strand, within CA264_12610 at 2943.142 kb on + strand, within CA264_12610 at 2943.143 kb on - strand, within CA264_12610 at 2943.145 kb on - strand, within CA264_12610 at 2943.197 kb on + strand, within CA264_12610 at 2943.300 kb on - strand, within CA264_12610 at 2943.445 kb on + strand, within CA264_12610 at 2943.445 kb on + strand, within CA264_12610 at 2943.445 kb on + strand, within CA264_12610 at 2943.497 kb on + strand, within CA264_12610 at 2943.497 kb on + strand, within CA264_12610 at 2943.498 kb on - strand, within CA264_12610 at 2943.498 kb on - strand, within CA264_12610 at 2943.597 kb on + strand, within CA264_12610 at 2943.598 kb on - strand, within CA264_12610 at 2943.637 kb on + strand at 2943.637 kb on + strand at 2943.645 kb on - strand at 2943.646 kb on + strand at 2943.777 kb on - strand at 2943.779 kb on - strand at 2943.798 kb on + strand at 2943.799 kb on - strand at 2943.799 kb on - strand at 2943.820 kb on + strand at 2943.820 kb on + strand at 2943.820 kb on + strand at 2943.820 kb on + strand at 2943.820 kb on + strand at 2943.820 kb on + strand at 2943.820 kb on + strand at 2943.821 kb on - strand at 2943.821 kb on - strand at 2943.821 kb on - strand at 2943.903 kb on + strand at 2944.030 kb on - strand, within CA264_12615 at 2944.035 kb on - strand, within CA264_12615 at 2944.035 kb on - strand, within CA264_12615 at 2944.066 kb on - strand, within CA264_12615 at 2944.066 kb on - strand, within CA264_12615 at 2944.153 kb on + strand, within CA264_12615 at 2944.156 kb on + strand, within CA264_12615 at 2944.188 kb on + strand, within CA264_12615 at 2944.390 kb on + strand, within CA264_12615 at 2944.448 kb on + strand, within CA264_12615 at 2944.448 kb on + strand, within CA264_12615 at 2944.448 kb on + strand, within CA264_12615 at 2944.449 kb on - strand, within CA264_12615 at 2944.449 kb on - strand, within CA264_12615 at 2944.468 kb on + strand, within CA264_12615 at 2944.469 kb on - strand, within CA264_12615 at 2944.469 kb on - strand, within CA264_12615 at 2944.510 kb on + strand, within CA264_12615 at 2944.511 kb on - strand, within CA264_12615 at 2944.566 kb on - strand, within CA264_12615 at 2944.573 kb on - strand, within CA264_12615 at 2944.619 kb on + strand, within CA264_12615 at 2944.753 kb on + strand, within CA264_12615
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Cobalt chloride 0.15 mM remove 2,941,410 - -0.4 2,941,414 - +0.0 2,941,440 + +0.3 2,941,458 - -0.6 2,941,458 - -0.3 2,941,582 + CA264_12605 0.21 -0.2 2,941,582 + CA264_12605 0.21 -0.1 2,941,584 + CA264_12605 0.22 -0.3 2,941,585 - CA264_12605 0.22 -0.1 2,941,585 - CA264_12605 0.22 +0.1 2,941,626 + CA264_12605 0.29 -0.3 2,941,627 - CA264_12605 0.29 -0.5 2,941,838 + CA264_12605 0.63 -0.2 2,941,840 + CA264_12605 0.63 -0.5 2,941,841 - CA264_12605 0.63 +0.1 2,941,900 + CA264_12605 0.73 -0.2 2,941,900 + CA264_12605 0.73 -0.1 2,941,901 - CA264_12605 0.73 -0.4 2,941,920 + CA264_12605 0.76 -0.2 2,941,949 + CA264_12605 0.81 +0.6 2,942,003 + CA264_12605 0.89 -1.2 2,942,129 + +1.0 2,942,130 - -0.1 2,942,132 + -0.2 2,942,132 + +0.1 2,942,133 - +0.0 2,942,133 - +0.1 2,942,144 + +0.0 2,942,144 + -0.4 2,942,149 + +1.2 2,942,150 - -0.2 2,942,152 + +0.9 2,942,262 + +0.3 2,942,289 + -0.8 2,942,344 + -0.0 2,942,344 + -0.4 2,942,344 + -1.3 2,942,344 + -0.2 2,942,345 - -0.4 2,942,346 + +0.3 2,942,352 + +0.8 2,942,352 + -0.6 2,942,353 - -1.3 2,942,353 - +0.4 2,942,353 - +1.7 2,942,353 - +0.1 2,942,353 - -0.7 2,942,353 - +0.9 2,942,353 - +1.6 2,942,354 + -0.4 2,942,354 + -0.3 2,942,354 + -0.4 2,942,354 + +1.3 2,942,354 + -0.1 2,942,355 - +0.6 2,942,355 - -0.1 2,942,355 - -0.8 2,942,355 - +0.2 2,942,372 - +0.5 2,942,386 - -0.3 2,942,411 + -0.6 2,942,548 + CA264_12610 0.11 -1.0 2,942,549 - CA264_12610 0.11 +0.2 2,942,549 - CA264_12610 0.11 +0.7 2,942,575 + CA264_12610 0.13 -0.1 2,942,575 + CA264_12610 0.13 -0.4 2,942,575 + CA264_12610 0.13 +0.1 2,942,575 + CA264_12610 0.13 +0.1 2,942,575 + CA264_12610 0.13 -0.5 2,942,575 + CA264_12610 0.13 +0.9 2,942,576 - CA264_12610 0.13 -0.2 2,942,577 + CA264_12610 0.13 +0.5 2,942,582 + CA264_12610 0.14 -0.2 2,942,675 - CA264_12610 0.20 -0.1 2,942,914 + CA264_12610 0.38 +1.2 2,942,953 + CA264_12610 0.41 -0.2 2,942,954 - CA264_12610 0.41 +0.2 2,943,007 + CA264_12610 0.45 +1.1 2,943,041 - CA264_12610 0.47 -0.1 2,943,052 + CA264_12610 0.48 -0.2 2,943,115 + CA264_12610 0.53 +0.3 2,943,142 + CA264_12610 0.55 -0.9 2,943,143 - CA264_12610 0.55 -0.8 2,943,145 - CA264_12610 0.55 +0.7 2,943,197 + CA264_12610 0.59 +1.3 2,943,300 - CA264_12610 0.66 +0.1 2,943,445 + CA264_12610 0.77 -0.3 2,943,445 + CA264_12610 0.77 -0.6 2,943,445 + CA264_12610 0.77 +1.9 2,943,497 + CA264_12610 0.81 +1.4 2,943,497 + CA264_12610 0.81 +0.7 2,943,498 - CA264_12610 0.81 -0.2 2,943,498 - CA264_12610 0.81 -0.3 2,943,597 + CA264_12610 0.88 -0.6 2,943,598 - CA264_12610 0.88 -0.0 2,943,637 + +0.1 2,943,637 + +0.3 2,943,645 - -2.2 2,943,646 + -0.4 2,943,777 - +0.7 2,943,779 - +0.0 2,943,798 + -0.7 2,943,799 - -0.8 2,943,799 - -0.4 2,943,820 + +1.5 2,943,820 + +0.2 2,943,820 + -0.1 2,943,820 + +0.3 2,943,820 + +0.2 2,943,820 + +2.0 2,943,820 + -0.6 2,943,821 - -0.4 2,943,821 - -0.1 2,943,821 - -0.6 2,943,903 + -0.7 2,944,030 - CA264_12615 0.14 -0.2 2,944,035 - CA264_12615 0.14 -0.3 2,944,035 - CA264_12615 0.14 -0.3 2,944,066 - CA264_12615 0.16 +1.3 2,944,066 - CA264_12615 0.16 -1.6 2,944,153 + CA264_12615 0.21 +0.3 2,944,156 + CA264_12615 0.22 -0.5 2,944,188 + CA264_12615 0.24 +0.4 2,944,390 + CA264_12615 0.36 -0.7 2,944,448 + CA264_12615 0.39 +0.7 2,944,448 + CA264_12615 0.39 +0.1 2,944,448 + CA264_12615 0.39 +1.3 2,944,449 - CA264_12615 0.39 -0.5 2,944,449 - CA264_12615 0.39 +0.8 2,944,468 + CA264_12615 0.41 -0.0 2,944,469 - CA264_12615 0.41 +1.1 2,944,469 - CA264_12615 0.41 -0.1 2,944,510 + CA264_12615 0.43 -0.3 2,944,511 - CA264_12615 0.43 -1.2 2,944,566 - CA264_12615 0.47 -0.8 2,944,573 - CA264_12615 0.47 -0.1 2,944,619 + CA264_12615 0.50 +0.8 2,944,753 + CA264_12615 0.58 +0.3
Or see this region's nucleotide sequence