Experiment: m.b. Cobalt chloride 0.15 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_11015 and CA264_11020 are separated by 318 nucleotides CA264_11020 and CA264_11025 are separated by 2 nucleotides
CA264_11015: CA264_11015 - hypothetical protein, at 2,542,887 to 2,543,948
_11015
CA264_11020: CA264_11020 - PadR family transcriptional regulator, at 2,544,267 to 2,544,605
_11020
CA264_11025: CA264_11025 - hypothetical protein, at 2,544,608 to 2,547,148
_11025
Position (kb)
2544
2545 Strain fitness (log2 ratio)
-2
-1
0
1 at 2543.324 kb on - strand, within CA264_11015 at 2543.324 kb on - strand, within CA264_11015 at 2543.375 kb on + strand, within CA264_11015 at 2543.376 kb on - strand, within CA264_11015 at 2543.376 kb on - strand, within CA264_11015 at 2543.379 kb on - strand, within CA264_11015 at 2543.379 kb on - strand, within CA264_11015 at 2543.449 kb on + strand, within CA264_11015 at 2543.450 kb on - strand, within CA264_11015 at 2543.450 kb on - strand, within CA264_11015 at 2543.539 kb on + strand, within CA264_11015 at 2543.590 kb on + strand, within CA264_11015 at 2543.600 kb on - strand, within CA264_11015 at 2543.710 kb on + strand, within CA264_11015 at 2543.764 kb on + strand, within CA264_11015 at 2543.764 kb on + strand, within CA264_11015 at 2543.764 kb on + strand, within CA264_11015 at 2543.894 kb on + strand at 2543.897 kb on - strand at 2543.995 kb on - strand at 2544.000 kb on + strand at 2544.000 kb on + strand at 2544.001 kb on - strand at 2544.001 kb on - strand at 2544.001 kb on - strand at 2544.003 kb on - strand at 2544.178 kb on + strand at 2544.252 kb on + strand at 2544.253 kb on - strand at 2544.332 kb on + strand, within CA264_11020 at 2544.351 kb on + strand, within CA264_11020 at 2544.352 kb on - strand, within CA264_11020 at 2544.362 kb on + strand, within CA264_11020 at 2544.451 kb on + strand, within CA264_11020 at 2544.456 kb on + strand, within CA264_11020 at 2544.456 kb on + strand, within CA264_11020 at 2544.458 kb on + strand, within CA264_11020 at 2544.458 kb on + strand, within CA264_11020 at 2544.458 kb on + strand, within CA264_11020 at 2544.458 kb on + strand, within CA264_11020 at 2544.576 kb on + strand at 2544.576 kb on + strand at 2544.604 kb on - strand at 2544.621 kb on + strand at 2544.621 kb on + strand at 2544.622 kb on - strand at 2544.625 kb on + strand at 2544.625 kb on + strand at 2544.625 kb on + strand at 2544.625 kb on + strand at 2544.625 kb on + strand at 2544.626 kb on - strand at 2544.894 kb on - strand, within CA264_11025 at 2544.954 kb on - strand, within CA264_11025 at 2545.075 kb on - strand, within CA264_11025 at 2545.129 kb on + strand, within CA264_11025 at 2545.130 kb on - strand, within CA264_11025 at 2545.131 kb on + strand, within CA264_11025 at 2545.131 kb on + strand, within CA264_11025 at 2545.131 kb on + strand, within CA264_11025 at 2545.132 kb on - strand, within CA264_11025 at 2545.132 kb on - strand, within CA264_11025 at 2545.132 kb on - strand, within CA264_11025 at 2545.136 kb on + strand, within CA264_11025 at 2545.136 kb on + strand, within CA264_11025 at 2545.137 kb on - strand, within CA264_11025 at 2545.298 kb on - strand, within CA264_11025 at 2545.298 kb on - strand, within CA264_11025 at 2545.334 kb on + strand, within CA264_11025 at 2545.334 kb on + strand, within CA264_11025 at 2545.335 kb on - strand, within CA264_11025 at 2545.369 kb on + strand, within CA264_11025 at 2545.573 kb on - strand, within CA264_11025
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Cobalt chloride 0.15 mM remove 2,543,324 - CA264_11015 0.41 -1.0 2,543,324 - CA264_11015 0.41 -0.6 2,543,375 + CA264_11015 0.46 -0.4 2,543,376 - CA264_11015 0.46 +0.2 2,543,376 - CA264_11015 0.46 +0.2 2,543,379 - CA264_11015 0.46 -0.0 2,543,379 - CA264_11015 0.46 -0.4 2,543,449 + CA264_11015 0.53 +1.0 2,543,450 - CA264_11015 0.53 +0.8 2,543,450 - CA264_11015 0.53 +0.3 2,543,539 + CA264_11015 0.61 +0.6 2,543,590 + CA264_11015 0.66 +0.3 2,543,600 - CA264_11015 0.67 +0.2 2,543,710 + CA264_11015 0.77 -0.1 2,543,764 + CA264_11015 0.83 +0.1 2,543,764 + CA264_11015 0.83 +0.0 2,543,764 + CA264_11015 0.83 -0.1 2,543,894 + -0.3 2,543,897 - -2.1 2,543,995 - -2.1 2,544,000 + -0.3 2,544,000 + -0.3 2,544,001 - -0.8 2,544,001 - -0.6 2,544,001 - -0.5 2,544,003 - -0.7 2,544,178 + +0.6 2,544,252 + -0.6 2,544,253 - -0.5 2,544,332 + CA264_11020 0.19 +0.6 2,544,351 + CA264_11020 0.25 -1.6 2,544,352 - CA264_11020 0.25 -2.1 2,544,362 + CA264_11020 0.28 -0.6 2,544,451 + CA264_11020 0.54 -1.1 2,544,456 + CA264_11020 0.56 -0.8 2,544,456 + CA264_11020 0.56 +0.2 2,544,458 + CA264_11020 0.56 -0.7 2,544,458 + CA264_11020 0.56 -0.8 2,544,458 + CA264_11020 0.56 -0.8 2,544,458 + CA264_11020 0.56 -0.9 2,544,576 + -0.5 2,544,576 + -0.8 2,544,604 - +0.6 2,544,621 + +0.3 2,544,621 + +1.0 2,544,622 - +1.0 2,544,625 + +0.1 2,544,625 + -0.1 2,544,625 + -1.1 2,544,625 + -0.2 2,544,625 + +0.0 2,544,626 - -0.5 2,544,894 - CA264_11025 0.11 -1.3 2,544,954 - CA264_11025 0.14 -1.2 2,545,075 - CA264_11025 0.18 +0.1 2,545,129 + CA264_11025 0.21 -0.2 2,545,130 - CA264_11025 0.21 +0.4 2,545,131 + CA264_11025 0.21 -0.1 2,545,131 + CA264_11025 0.21 +1.3 2,545,131 + CA264_11025 0.21 -0.9 2,545,132 - CA264_11025 0.21 -0.0 2,545,132 - CA264_11025 0.21 +0.4 2,545,132 - CA264_11025 0.21 -0.6 2,545,136 + CA264_11025 0.21 -0.5 2,545,136 + CA264_11025 0.21 +0.3 2,545,137 - CA264_11025 0.21 -0.9 2,545,298 - CA264_11025 0.27 -0.0 2,545,298 - CA264_11025 0.27 -1.7 2,545,334 + CA264_11025 0.29 +0.1 2,545,334 + CA264_11025 0.29 +0.8 2,545,335 - CA264_11025 0.29 +0.6 2,545,369 + CA264_11025 0.30 -0.4 2,545,573 - CA264_11025 0.38 -0.8
Or see this region's nucleotide sequence