Experiment: m.b. Cobalt chloride 0.15 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_06695 and CA264_06700 are separated by 37 nucleotides CA264_06700 and CA264_06705 are separated by 51 nucleotides
CA264_06695: CA264_06695 - hydrolase, at 1,546,451 to 1,547,542
_06695
CA264_06700: CA264_06700 - hypothetical protein, at 1,547,580 to 1,548,464
_06700
CA264_06705: CA264_06705 - hypothetical protein, at 1,548,516 to 1,549,766
_06705
Position (kb)
1547
1548
1549 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 1546.591 kb on - strand, within CA264_06695 at 1546.612 kb on + strand, within CA264_06695 at 1546.613 kb on - strand, within CA264_06695 at 1546.717 kb on + strand, within CA264_06695 at 1546.717 kb on + strand, within CA264_06695 at 1546.718 kb on - strand, within CA264_06695 at 1546.776 kb on + strand, within CA264_06695 at 1546.777 kb on - strand, within CA264_06695 at 1546.777 kb on - strand, within CA264_06695 at 1546.951 kb on - strand, within CA264_06695 at 1547.001 kb on + strand, within CA264_06695 at 1547.001 kb on + strand, within CA264_06695 at 1547.002 kb on - strand, within CA264_06695 at 1547.042 kb on + strand, within CA264_06695 at 1547.043 kb on - strand, within CA264_06695 at 1547.043 kb on - strand, within CA264_06695 at 1547.066 kb on + strand, within CA264_06695 at 1547.081 kb on + strand, within CA264_06695 at 1547.103 kb on + strand, within CA264_06695 at 1547.150 kb on - strand, within CA264_06695 at 1547.150 kb on - strand, within CA264_06695 at 1547.151 kb on + strand, within CA264_06695 at 1547.151 kb on + strand, within CA264_06695 at 1547.152 kb on - strand, within CA264_06695 at 1547.158 kb on + strand, within CA264_06695 at 1547.159 kb on - strand, within CA264_06695 at 1547.213 kb on + strand, within CA264_06695 at 1547.215 kb on + strand, within CA264_06695 at 1547.216 kb on - strand, within CA264_06695 at 1547.217 kb on + strand, within CA264_06695 at 1547.218 kb on - strand, within CA264_06695 at 1547.235 kb on + strand, within CA264_06695 at 1547.235 kb on + strand, within CA264_06695 at 1547.235 kb on + strand, within CA264_06695 at 1547.236 kb on - strand, within CA264_06695 at 1547.267 kb on - strand, within CA264_06695 at 1547.269 kb on + strand, within CA264_06695 at 1547.270 kb on - strand, within CA264_06695 at 1547.279 kb on - strand, within CA264_06695 at 1547.279 kb on - strand, within CA264_06695 at 1547.302 kb on + strand, within CA264_06695 at 1547.302 kb on + strand, within CA264_06695 at 1547.302 kb on + strand, within CA264_06695 at 1547.344 kb on + strand, within CA264_06695 at 1547.344 kb on + strand, within CA264_06695 at 1547.345 kb on - strand, within CA264_06695 at 1547.385 kb on - strand, within CA264_06695 at 1547.423 kb on + strand, within CA264_06695 at 1547.460 kb on + strand at 1547.461 kb on - strand at 1547.461 kb on - strand at 1547.461 kb on - strand at 1547.504 kb on + strand at 1547.507 kb on - strand at 1547.507 kb on - strand at 1547.555 kb on + strand at 1547.555 kb on + strand at 1547.556 kb on - strand at 1547.597 kb on + strand at 1547.600 kb on + strand at 1547.600 kb on + strand at 1547.657 kb on - strand at 1547.724 kb on + strand, within CA264_06700 at 1547.867 kb on + strand, within CA264_06700 at 1547.880 kb on + strand, within CA264_06700 at 1547.880 kb on + strand, within CA264_06700 at 1547.904 kb on + strand, within CA264_06700 at 1548.057 kb on - strand, within CA264_06700 at 1548.060 kb on + strand, within CA264_06700 at 1548.193 kb on + strand, within CA264_06700 at 1548.287 kb on - strand, within CA264_06700 at 1548.287 kb on - strand, within CA264_06700 at 1548.296 kb on + strand, within CA264_06700 at 1548.297 kb on - strand, within CA264_06700 at 1548.517 kb on + strand at 1548.555 kb on + strand at 1548.555 kb on + strand at 1548.556 kb on - strand at 1548.635 kb on - strand at 1548.635 kb on - strand at 1548.637 kb on - strand at 1548.637 kb on - strand at 1548.637 kb on - strand at 1548.775 kb on + strand, within CA264_06705 at 1548.776 kb on - strand, within CA264_06705 at 1548.776 kb on - strand, within CA264_06705 at 1548.776 kb on - strand, within CA264_06705 at 1548.776 kb on - strand, within CA264_06705 at 1548.980 kb on + strand, within CA264_06705 at 1548.980 kb on + strand, within CA264_06705 at 1548.982 kb on + strand, within CA264_06705 at 1548.982 kb on + strand, within CA264_06705 at 1548.985 kb on + strand, within CA264_06705 at 1548.986 kb on - strand, within CA264_06705 at 1549.013 kb on + strand, within CA264_06705 at 1549.021 kb on - strand, within CA264_06705 at 1549.083 kb on + strand, within CA264_06705 at 1549.083 kb on + strand, within CA264_06705 at 1549.084 kb on - strand, within CA264_06705 at 1549.084 kb on - strand, within CA264_06705 at 1549.143 kb on + strand, within CA264_06705 at 1549.190 kb on - strand, within CA264_06705 at 1549.190 kb on - strand, within CA264_06705 at 1549.218 kb on + strand, within CA264_06705 at 1549.228 kb on + strand, within CA264_06705 at 1549.229 kb on - strand, within CA264_06705 at 1549.232 kb on + strand, within CA264_06705 at 1549.233 kb on - strand, within CA264_06705 at 1549.244 kb on + strand, within CA264_06705 at 1549.244 kb on + strand, within CA264_06705 at 1549.260 kb on - strand, within CA264_06705 at 1549.270 kb on - strand, within CA264_06705 at 1549.270 kb on - strand, within CA264_06705 at 1549.270 kb on - strand, within CA264_06705 at 1549.276 kb on + strand, within CA264_06705 at 1549.276 kb on + strand, within CA264_06705 at 1549.277 kb on - strand, within CA264_06705 at 1549.277 kb on - strand, within CA264_06705 at 1549.277 kb on - strand, within CA264_06705 at 1549.277 kb on - strand, within CA264_06705 at 1549.287 kb on + strand, within CA264_06705 at 1549.287 kb on + strand, within CA264_06705 at 1549.287 kb on + strand, within CA264_06705 at 1549.351 kb on + strand, within CA264_06705 at 1549.351 kb on + strand, within CA264_06705 at 1549.351 kb on + strand, within CA264_06705 at 1549.352 kb on - strand, within CA264_06705 at 1549.352 kb on - strand, within CA264_06705 at 1549.358 kb on + strand, within CA264_06705 at 1549.404 kb on - strand, within CA264_06705 at 1549.411 kb on + strand, within CA264_06705 at 1549.412 kb on - strand, within CA264_06705 at 1549.418 kb on - strand, within CA264_06705 at 1549.458 kb on - strand, within CA264_06705
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Cobalt chloride 0.15 mM remove 1,546,591 - CA264_06695 0.13 +0.8 1,546,612 + CA264_06695 0.15 -0.7 1,546,613 - CA264_06695 0.15 -0.6 1,546,717 + CA264_06695 0.24 -0.1 1,546,717 + CA264_06695 0.24 +0.3 1,546,718 - CA264_06695 0.24 -0.8 1,546,776 + CA264_06695 0.30 -0.9 1,546,777 - CA264_06695 0.30 +0.2 1,546,777 - CA264_06695 0.30 -0.3 1,546,951 - CA264_06695 0.46 -0.5 1,547,001 + CA264_06695 0.50 -0.4 1,547,001 + CA264_06695 0.50 +0.2 1,547,002 - CA264_06695 0.50 -1.3 1,547,042 + CA264_06695 0.54 +0.1 1,547,043 - CA264_06695 0.54 -0.9 1,547,043 - CA264_06695 0.54 -0.6 1,547,066 + CA264_06695 0.56 +0.1 1,547,081 + CA264_06695 0.58 -0.4 1,547,103 + CA264_06695 0.60 +1.1 1,547,150 - CA264_06695 0.64 -0.3 1,547,150 - CA264_06695 0.64 -0.8 1,547,151 + CA264_06695 0.64 +0.2 1,547,151 + CA264_06695 0.64 -1.7 1,547,152 - CA264_06695 0.64 -0.9 1,547,158 + CA264_06695 0.65 +1.0 1,547,159 - CA264_06695 0.65 -0.6 1,547,213 + CA264_06695 0.70 -0.2 1,547,215 + CA264_06695 0.70 +1.0 1,547,216 - CA264_06695 0.70 +0.1 1,547,217 + CA264_06695 0.70 +0.7 1,547,218 - CA264_06695 0.70 +1.6 1,547,235 + CA264_06695 0.72 -0.0 1,547,235 + CA264_06695 0.72 +0.8 1,547,235 + CA264_06695 0.72 -0.8 1,547,236 - CA264_06695 0.72 -0.3 1,547,267 - CA264_06695 0.75 +0.6 1,547,269 + CA264_06695 0.75 +2.1 1,547,270 - CA264_06695 0.75 -0.3 1,547,279 - CA264_06695 0.76 +0.3 1,547,279 - CA264_06695 0.76 -0.4 1,547,302 + CA264_06695 0.78 -0.0 1,547,302 + CA264_06695 0.78 +0.1 1,547,302 + CA264_06695 0.78 -0.2 1,547,344 + CA264_06695 0.82 +0.0 1,547,344 + CA264_06695 0.82 -0.2 1,547,345 - CA264_06695 0.82 -1.8 1,547,385 - CA264_06695 0.86 -1.1 1,547,423 + CA264_06695 0.89 -0.2 1,547,460 + -0.5 1,547,461 - +0.3 1,547,461 - -0.1 1,547,461 - +0.3 1,547,504 + +0.0 1,547,507 - -0.3 1,547,507 - -0.7 1,547,555 + -0.8 1,547,555 + -0.7 1,547,556 - -0.1 1,547,597 + -0.8 1,547,600 + -0.2 1,547,600 + -0.1 1,547,657 - -0.2 1,547,724 + CA264_06700 0.16 +0.2 1,547,867 + CA264_06700 0.32 +0.3 1,547,880 + CA264_06700 0.34 -0.6 1,547,880 + CA264_06700 0.34 +0.8 1,547,904 + CA264_06700 0.37 +0.6 1,548,057 - CA264_06700 0.54 +0.6 1,548,060 + CA264_06700 0.54 +0.7 1,548,193 + CA264_06700 0.69 +0.2 1,548,287 - CA264_06700 0.80 +0.1 1,548,287 - CA264_06700 0.80 +1.0 1,548,296 + CA264_06700 0.81 +0.2 1,548,297 - CA264_06700 0.81 +0.9 1,548,517 + +0.3 1,548,555 + +0.3 1,548,555 + -2.1 1,548,556 - -0.3 1,548,635 - +0.2 1,548,635 - -0.0 1,548,637 - -0.0 1,548,637 - +1.1 1,548,637 - -0.6 1,548,775 + CA264_06705 0.21 +0.3 1,548,776 - CA264_06705 0.21 -0.1 1,548,776 - CA264_06705 0.21 -0.1 1,548,776 - CA264_06705 0.21 -1.5 1,548,776 - CA264_06705 0.21 -0.0 1,548,980 + CA264_06705 0.37 +0.0 1,548,980 + CA264_06705 0.37 -0.3 1,548,982 + CA264_06705 0.37 -0.3 1,548,982 + CA264_06705 0.37 +0.2 1,548,985 + CA264_06705 0.37 -0.6 1,548,986 - CA264_06705 0.38 +0.1 1,549,013 + CA264_06705 0.40 +0.0 1,549,021 - CA264_06705 0.40 -0.5 1,549,083 + CA264_06705 0.45 -0.5 1,549,083 + CA264_06705 0.45 +0.3 1,549,084 - CA264_06705 0.45 -0.3 1,549,084 - CA264_06705 0.45 +0.7 1,549,143 + CA264_06705 0.50 -0.7 1,549,190 - CA264_06705 0.54 -0.4 1,549,190 - CA264_06705 0.54 -1.4 1,549,218 + CA264_06705 0.56 +0.6 1,549,228 + CA264_06705 0.57 -1.1 1,549,229 - CA264_06705 0.57 +0.3 1,549,232 + CA264_06705 0.57 +1.3 1,549,233 - CA264_06705 0.57 +0.8 1,549,244 + CA264_06705 0.58 -0.6 1,549,244 + CA264_06705 0.58 -0.9 1,549,260 - CA264_06705 0.59 -0.8 1,549,270 - CA264_06705 0.60 -1.0 1,549,270 - CA264_06705 0.60 -0.0 1,549,270 - CA264_06705 0.60 -0.9 1,549,276 + CA264_06705 0.61 -0.3 1,549,276 + CA264_06705 0.61 +0.2 1,549,277 - CA264_06705 0.61 -0.3 1,549,277 - CA264_06705 0.61 -0.1 1,549,277 - CA264_06705 0.61 -1.0 1,549,277 - CA264_06705 0.61 -0.7 1,549,287 + CA264_06705 0.62 -0.9 1,549,287 + CA264_06705 0.62 -2.2 1,549,287 + CA264_06705 0.62 -0.4 1,549,351 + CA264_06705 0.67 +0.7 1,549,351 + CA264_06705 0.67 +1.0 1,549,351 + CA264_06705 0.67 -0.0 1,549,352 - CA264_06705 0.67 -0.7 1,549,352 - CA264_06705 0.67 +0.3 1,549,358 + CA264_06705 0.67 -1.5 1,549,404 - CA264_06705 0.71 -0.4 1,549,411 + CA264_06705 0.72 -0.9 1,549,412 - CA264_06705 0.72 +0.4 1,549,418 - CA264_06705 0.72 +2.9 1,549,458 - CA264_06705 0.75 -0.1
Or see this region's nucleotide sequence