Strain Fitness in Pontibacter actiniarum KMM 6156, DSM 19842 around CA264_06700

Experiment: m.b. Cobalt chloride 0.15 mM

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntCA264_06695 and CA264_06700 are separated by 37 nucleotidesCA264_06700 and CA264_06705 are separated by 51 nucleotides CA264_06695: CA264_06695 - hydrolase, at 1,546,451 to 1,547,542 _06695 CA264_06700: CA264_06700 - hypothetical protein, at 1,547,580 to 1,548,464 _06700 CA264_06705: CA264_06705 - hypothetical protein, at 1,548,516 to 1,549,766 _06705 Position (kb) 1547 1548 1549Strain fitness (log2 ratio) -2 -1 0 1 2 3at 1546.591 kb on - strand, within CA264_06695at 1546.612 kb on + strand, within CA264_06695at 1546.613 kb on - strand, within CA264_06695at 1546.717 kb on + strand, within CA264_06695at 1546.717 kb on + strand, within CA264_06695at 1546.718 kb on - strand, within CA264_06695at 1546.776 kb on + strand, within CA264_06695at 1546.777 kb on - strand, within CA264_06695at 1546.777 kb on - strand, within CA264_06695at 1546.951 kb on - strand, within CA264_06695at 1547.001 kb on + strand, within CA264_06695at 1547.001 kb on + strand, within CA264_06695at 1547.002 kb on - strand, within CA264_06695at 1547.042 kb on + strand, within CA264_06695at 1547.043 kb on - strand, within CA264_06695at 1547.043 kb on - strand, within CA264_06695at 1547.066 kb on + strand, within CA264_06695at 1547.081 kb on + strand, within CA264_06695at 1547.103 kb on + strand, within CA264_06695at 1547.150 kb on - strand, within CA264_06695at 1547.150 kb on - strand, within CA264_06695at 1547.151 kb on + strand, within CA264_06695at 1547.151 kb on + strand, within CA264_06695at 1547.152 kb on - strand, within CA264_06695at 1547.158 kb on + strand, within CA264_06695at 1547.159 kb on - strand, within CA264_06695at 1547.213 kb on + strand, within CA264_06695at 1547.215 kb on + strand, within CA264_06695at 1547.216 kb on - strand, within CA264_06695at 1547.217 kb on + strand, within CA264_06695at 1547.218 kb on - strand, within CA264_06695at 1547.235 kb on + strand, within CA264_06695at 1547.235 kb on + strand, within CA264_06695at 1547.235 kb on + strand, within CA264_06695at 1547.236 kb on - strand, within CA264_06695at 1547.267 kb on - strand, within CA264_06695at 1547.269 kb on + strand, within CA264_06695at 1547.270 kb on - strand, within CA264_06695at 1547.279 kb on - strand, within CA264_06695at 1547.279 kb on - strand, within CA264_06695at 1547.302 kb on + strand, within CA264_06695at 1547.302 kb on + strand, within CA264_06695at 1547.302 kb on + strand, within CA264_06695at 1547.344 kb on + strand, within CA264_06695at 1547.344 kb on + strand, within CA264_06695at 1547.345 kb on - strand, within CA264_06695at 1547.385 kb on - strand, within CA264_06695at 1547.423 kb on + strand, within CA264_06695at 1547.460 kb on + strandat 1547.461 kb on - strandat 1547.461 kb on - strandat 1547.461 kb on - strandat 1547.504 kb on + strandat 1547.507 kb on - strandat 1547.507 kb on - strandat 1547.555 kb on + strandat 1547.555 kb on + strandat 1547.556 kb on - strandat 1547.597 kb on + strandat 1547.600 kb on + strandat 1547.600 kb on + strandat 1547.657 kb on - strandat 1547.724 kb on + strand, within CA264_06700at 1547.867 kb on + strand, within CA264_06700at 1547.880 kb on + strand, within CA264_06700at 1547.880 kb on + strand, within CA264_06700at 1547.904 kb on + strand, within CA264_06700at 1548.057 kb on - strand, within CA264_06700at 1548.060 kb on + strand, within CA264_06700at 1548.193 kb on + strand, within CA264_06700at 1548.287 kb on - strand, within CA264_06700at 1548.287 kb on - strand, within CA264_06700at 1548.296 kb on + strand, within CA264_06700at 1548.297 kb on - strand, within CA264_06700at 1548.517 kb on + strandat 1548.555 kb on + strandat 1548.555 kb on + strandat 1548.556 kb on - strandat 1548.635 kb on - strandat 1548.635 kb on - strandat 1548.637 kb on - strandat 1548.637 kb on - strandat 1548.637 kb on - strandat 1548.775 kb on + strand, within CA264_06705at 1548.776 kb on - strand, within CA264_06705at 1548.776 kb on - strand, within CA264_06705at 1548.776 kb on - strand, within CA264_06705at 1548.776 kb on - strand, within CA264_06705at 1548.980 kb on + strand, within CA264_06705at 1548.980 kb on + strand, within CA264_06705at 1548.982 kb on + strand, within CA264_06705at 1548.982 kb on + strand, within CA264_06705at 1548.985 kb on + strand, within CA264_06705at 1548.986 kb on - strand, within CA264_06705at 1549.013 kb on + strand, within CA264_06705at 1549.021 kb on - strand, within CA264_06705at 1549.083 kb on + strand, within CA264_06705at 1549.083 kb on + strand, within CA264_06705at 1549.084 kb on - strand, within CA264_06705at 1549.084 kb on - strand, within CA264_06705at 1549.143 kb on + strand, within CA264_06705at 1549.190 kb on - strand, within CA264_06705at 1549.190 kb on - strand, within CA264_06705at 1549.218 kb on + strand, within CA264_06705at 1549.228 kb on + strand, within CA264_06705at 1549.229 kb on - strand, within CA264_06705at 1549.232 kb on + strand, within CA264_06705at 1549.233 kb on - strand, within CA264_06705at 1549.244 kb on + strand, within CA264_06705at 1549.244 kb on + strand, within CA264_06705at 1549.260 kb on - strand, within CA264_06705at 1549.270 kb on - strand, within CA264_06705at 1549.270 kb on - strand, within CA264_06705at 1549.270 kb on - strand, within CA264_06705at 1549.276 kb on + strand, within CA264_06705at 1549.276 kb on + strand, within CA264_06705at 1549.277 kb on - strand, within CA264_06705at 1549.277 kb on - strand, within CA264_06705at 1549.277 kb on - strand, within CA264_06705at 1549.277 kb on - strand, within CA264_06705at 1549.287 kb on + strand, within CA264_06705at 1549.287 kb on + strand, within CA264_06705at 1549.287 kb on + strand, within CA264_06705at 1549.351 kb on + strand, within CA264_06705at 1549.351 kb on + strand, within CA264_06705at 1549.351 kb on + strand, within CA264_06705at 1549.352 kb on - strand, within CA264_06705at 1549.352 kb on - strand, within CA264_06705at 1549.358 kb on + strand, within CA264_06705at 1549.404 kb on - strand, within CA264_06705at 1549.411 kb on + strand, within CA264_06705at 1549.412 kb on - strand, within CA264_06705at 1549.418 kb on - strand, within CA264_06705at 1549.458 kb on - strand, within CA264_06705

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Cobalt chloride 0.15 mM
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1,546,591 - CA264_06695 0.13 +0.8
1,546,612 + CA264_06695 0.15 -0.7
1,546,613 - CA264_06695 0.15 -0.6
1,546,717 + CA264_06695 0.24 -0.1
1,546,717 + CA264_06695 0.24 +0.3
1,546,718 - CA264_06695 0.24 -0.8
1,546,776 + CA264_06695 0.30 -0.9
1,546,777 - CA264_06695 0.30 +0.2
1,546,777 - CA264_06695 0.30 -0.3
1,546,951 - CA264_06695 0.46 -0.5
1,547,001 + CA264_06695 0.50 -0.4
1,547,001 + CA264_06695 0.50 +0.2
1,547,002 - CA264_06695 0.50 -1.3
1,547,042 + CA264_06695 0.54 +0.1
1,547,043 - CA264_06695 0.54 -0.9
1,547,043 - CA264_06695 0.54 -0.6
1,547,066 + CA264_06695 0.56 +0.1
1,547,081 + CA264_06695 0.58 -0.4
1,547,103 + CA264_06695 0.60 +1.1
1,547,150 - CA264_06695 0.64 -0.3
1,547,150 - CA264_06695 0.64 -0.8
1,547,151 + CA264_06695 0.64 +0.2
1,547,151 + CA264_06695 0.64 -1.7
1,547,152 - CA264_06695 0.64 -0.9
1,547,158 + CA264_06695 0.65 +1.0
1,547,159 - CA264_06695 0.65 -0.6
1,547,213 + CA264_06695 0.70 -0.2
1,547,215 + CA264_06695 0.70 +1.0
1,547,216 - CA264_06695 0.70 +0.1
1,547,217 + CA264_06695 0.70 +0.7
1,547,218 - CA264_06695 0.70 +1.6
1,547,235 + CA264_06695 0.72 -0.0
1,547,235 + CA264_06695 0.72 +0.8
1,547,235 + CA264_06695 0.72 -0.8
1,547,236 - CA264_06695 0.72 -0.3
1,547,267 - CA264_06695 0.75 +0.6
1,547,269 + CA264_06695 0.75 +2.1
1,547,270 - CA264_06695 0.75 -0.3
1,547,279 - CA264_06695 0.76 +0.3
1,547,279 - CA264_06695 0.76 -0.4
1,547,302 + CA264_06695 0.78 -0.0
1,547,302 + CA264_06695 0.78 +0.1
1,547,302 + CA264_06695 0.78 -0.2
1,547,344 + CA264_06695 0.82 +0.0
1,547,344 + CA264_06695 0.82 -0.2
1,547,345 - CA264_06695 0.82 -1.8
1,547,385 - CA264_06695 0.86 -1.1
1,547,423 + CA264_06695 0.89 -0.2
1,547,460 + -0.5
1,547,461 - +0.3
1,547,461 - -0.1
1,547,461 - +0.3
1,547,504 + +0.0
1,547,507 - -0.3
1,547,507 - -0.7
1,547,555 + -0.8
1,547,555 + -0.7
1,547,556 - -0.1
1,547,597 + -0.8
1,547,600 + -0.2
1,547,600 + -0.1
1,547,657 - -0.2
1,547,724 + CA264_06700 0.16 +0.2
1,547,867 + CA264_06700 0.32 +0.3
1,547,880 + CA264_06700 0.34 -0.6
1,547,880 + CA264_06700 0.34 +0.8
1,547,904 + CA264_06700 0.37 +0.6
1,548,057 - CA264_06700 0.54 +0.6
1,548,060 + CA264_06700 0.54 +0.7
1,548,193 + CA264_06700 0.69 +0.2
1,548,287 - CA264_06700 0.80 +0.1
1,548,287 - CA264_06700 0.80 +1.0
1,548,296 + CA264_06700 0.81 +0.2
1,548,297 - CA264_06700 0.81 +0.9
1,548,517 + +0.3
1,548,555 + +0.3
1,548,555 + -2.1
1,548,556 - -0.3
1,548,635 - +0.2
1,548,635 - -0.0
1,548,637 - -0.0
1,548,637 - +1.1
1,548,637 - -0.6
1,548,775 + CA264_06705 0.21 +0.3
1,548,776 - CA264_06705 0.21 -0.1
1,548,776 - CA264_06705 0.21 -0.1
1,548,776 - CA264_06705 0.21 -1.5
1,548,776 - CA264_06705 0.21 -0.0
1,548,980 + CA264_06705 0.37 +0.0
1,548,980 + CA264_06705 0.37 -0.3
1,548,982 + CA264_06705 0.37 -0.3
1,548,982 + CA264_06705 0.37 +0.2
1,548,985 + CA264_06705 0.37 -0.6
1,548,986 - CA264_06705 0.38 +0.1
1,549,013 + CA264_06705 0.40 +0.0
1,549,021 - CA264_06705 0.40 -0.5
1,549,083 + CA264_06705 0.45 -0.5
1,549,083 + CA264_06705 0.45 +0.3
1,549,084 - CA264_06705 0.45 -0.3
1,549,084 - CA264_06705 0.45 +0.7
1,549,143 + CA264_06705 0.50 -0.7
1,549,190 - CA264_06705 0.54 -0.4
1,549,190 - CA264_06705 0.54 -1.4
1,549,218 + CA264_06705 0.56 +0.6
1,549,228 + CA264_06705 0.57 -1.1
1,549,229 - CA264_06705 0.57 +0.3
1,549,232 + CA264_06705 0.57 +1.3
1,549,233 - CA264_06705 0.57 +0.8
1,549,244 + CA264_06705 0.58 -0.6
1,549,244 + CA264_06705 0.58 -0.9
1,549,260 - CA264_06705 0.59 -0.8
1,549,270 - CA264_06705 0.60 -1.0
1,549,270 - CA264_06705 0.60 -0.0
1,549,270 - CA264_06705 0.60 -0.9
1,549,276 + CA264_06705 0.61 -0.3
1,549,276 + CA264_06705 0.61 +0.2
1,549,277 - CA264_06705 0.61 -0.3
1,549,277 - CA264_06705 0.61 -0.1
1,549,277 - CA264_06705 0.61 -1.0
1,549,277 - CA264_06705 0.61 -0.7
1,549,287 + CA264_06705 0.62 -0.9
1,549,287 + CA264_06705 0.62 -2.2
1,549,287 + CA264_06705 0.62 -0.4
1,549,351 + CA264_06705 0.67 +0.7
1,549,351 + CA264_06705 0.67 +1.0
1,549,351 + CA264_06705 0.67 -0.0
1,549,352 - CA264_06705 0.67 -0.7
1,549,352 - CA264_06705 0.67 +0.3
1,549,358 + CA264_06705 0.67 -1.5
1,549,404 - CA264_06705 0.71 -0.4
1,549,411 + CA264_06705 0.72 -0.9
1,549,412 - CA264_06705 0.72 +0.4
1,549,418 - CA264_06705 0.72 +2.9
1,549,458 - CA264_06705 0.75 -0.1

Or see this region's nucleotide sequence