Experiment: m.b. Cobalt chloride 0.15 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_01425 and CA264_01430 are separated by 27 nucleotides CA264_01430 and CA264_01435 overlap by 23 nucleotides CA264_01435 and CA264_01440 are separated by 8 nucleotides
CA264_01425: CA264_01425 - RelA/SpoT family protein, at 338,996 to 341,188
_01425
CA264_01430: CA264_01430 - transcriptional repressor, at 341,216 to 341,710
_01430
CA264_01435: CA264_01435 - anti-anti-sigma factor, at 341,688 to 342,038
_01435
CA264_01440: CA264_01440 - adenylosuccinate synthase, at 342,047 to 343,330
_01440
Position (kb) 341
342 Strain fitness (log2 ratio) -2
-1
0
1
2
3 at 340.235 kb on - strand, within CA264_01425 at 340.235 kb on - strand, within CA264_01425 at 340.246 kb on + strand, within CA264_01425 at 340.318 kb on - strand, within CA264_01425 at 340.343 kb on + strand, within CA264_01425 at 340.344 kb on - strand, within CA264_01425 at 340.344 kb on - strand, within CA264_01425 at 340.345 kb on + strand, within CA264_01425 at 340.418 kb on + strand, within CA264_01425 at 340.418 kb on + strand, within CA264_01425 at 340.418 kb on + strand, within CA264_01425 at 340.450 kb on + strand, within CA264_01425 at 340.577 kb on - strand, within CA264_01425 at 340.601 kb on + strand, within CA264_01425 at 340.601 kb on + strand, within CA264_01425 at 340.625 kb on - strand, within CA264_01425 at 341.162 kb on - strand at 341.197 kb on + strand at 341.198 kb on - strand at 341.199 kb on + strand at 341.199 kb on + strand at 341.199 kb on + strand at 341.199 kb on + strand at 341.199 kb on + strand at 341.200 kb on - strand at 341.200 kb on - strand at 341.200 kb on - strand at 341.200 kb on - strand at 341.200 kb on - strand at 341.200 kb on - strand at 341.200 kb on - strand at 341.200 kb on - strand at 341.201 kb on + strand at 341.201 kb on + strand at 341.201 kb on + strand at 341.201 kb on + strand at 341.201 kb on + strand at 341.202 kb on - strand at 341.202 kb on - strand at 341.202 kb on - strand at 341.202 kb on - strand at 341.202 kb on - strand at 341.202 kb on - strand at 341.203 kb on + strand at 341.203 kb on + strand at 341.203 kb on + strand at 341.203 kb on + strand at 341.203 kb on + strand at 341.203 kb on + strand at 341.203 kb on + strand at 341.203 kb on + strand at 341.203 kb on + strand at 341.204 kb on - strand at 341.204 kb on - strand at 341.204 kb on - strand at 341.204 kb on - strand at 341.204 kb on - strand at 341.204 kb on - strand at 341.204 kb on - strand at 341.204 kb on - strand at 341.204 kb on - strand at 341.204 kb on - strand at 341.204 kb on - strand at 341.208 kb on + strand at 341.209 kb on - strand at 341.210 kb on + strand at 341.210 kb on + strand at 341.211 kb on - strand at 341.214 kb on + strand at 341.214 kb on + strand at 341.215 kb on - strand at 341.224 kb on - strand at 341.224 kb on - strand at 341.231 kb on - strand at 341.231 kb on - strand at 341.327 kb on + strand, within CA264_01430 at 341.411 kb on + strand, within CA264_01430 at 341.411 kb on + strand, within CA264_01430 at 341.576 kb on - strand, within CA264_01430 at 341.576 kb on - strand, within CA264_01430 at 341.634 kb on + strand, within CA264_01430 at 341.634 kb on + strand, within CA264_01430 at 341.635 kb on - strand, within CA264_01430 at 341.694 kb on + strand at 341.708 kb on + strand at 341.709 kb on - strand at 341.796 kb on + strand, within CA264_01435 at 341.797 kb on - strand, within CA264_01435 at 341.835 kb on - strand, within CA264_01435 at 341.924 kb on + strand, within CA264_01435 at 341.959 kb on + strand, within CA264_01435
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Cobalt chloride 0.15 mM remove 340,235 - CA264_01425 0.56 -0.2 340,235 - CA264_01425 0.56 -0.8 340,246 + CA264_01425 0.57 -0.3 340,318 - CA264_01425 0.60 +0.0 340,343 + CA264_01425 0.61 +1.0 340,344 - CA264_01425 0.61 -1.0 340,344 - CA264_01425 0.61 -0.9 340,345 + CA264_01425 0.62 +0.6 340,418 + CA264_01425 0.65 +1.7 340,418 + CA264_01425 0.65 -1.0 340,418 + CA264_01425 0.65 -1.4 340,450 + CA264_01425 0.66 +0.3 340,577 - CA264_01425 0.72 +0.3 340,601 + CA264_01425 0.73 +1.3 340,601 + CA264_01425 0.73 -2.0 340,625 - CA264_01425 0.74 -0.6 341,162 - -1.7 341,197 + -0.3 341,198 - -0.5 341,199 + -1.5 341,199 + -0.6 341,199 + -0.5 341,199 + +1.6 341,199 + -0.9 341,200 - -0.3 341,200 - -0.3 341,200 - -0.1 341,200 - -0.5 341,200 - +0.4 341,200 - -0.2 341,200 - +0.6 341,200 - +0.5 341,201 + -0.4 341,201 + -0.5 341,201 + -0.6 341,201 + +0.2 341,201 + +0.3 341,202 - -0.0 341,202 - -0.4 341,202 - +0.4 341,202 - -0.4 341,202 - -0.2 341,202 - -0.4 341,203 + -0.7 341,203 + +1.9 341,203 + +0.1 341,203 + +0.3 341,203 + -0.1 341,203 + -0.7 341,203 + +0.1 341,203 + +0.2 341,203 + -0.4 341,204 - -0.0 341,204 - -0.9 341,204 - -0.4 341,204 - +0.1 341,204 - +1.3 341,204 - +1.4 341,204 - -0.5 341,204 - +0.2 341,204 - -0.6 341,204 - -0.3 341,204 - +0.8 341,208 + -0.1 341,209 - +0.4 341,210 + -0.0 341,210 + +0.0 341,211 - +0.1 341,214 + -0.2 341,214 + -0.5 341,215 - -0.2 341,224 - +0.9 341,224 - -0.5 341,231 - +3.2 341,231 - +2.9 341,327 + CA264_01430 0.22 +2.7 341,411 + CA264_01430 0.39 +2.7 341,411 + CA264_01430 0.39 +2.9 341,576 - CA264_01430 0.73 +2.8 341,576 - CA264_01430 0.73 +2.1 341,634 + CA264_01430 0.84 +2.9 341,634 + CA264_01430 0.84 +2.6 341,635 - CA264_01430 0.85 +2.6 341,694 + -0.3 341,708 + +0.0 341,709 - +0.3 341,796 + CA264_01435 0.31 -0.0 341,797 - CA264_01435 0.31 -0.1 341,835 - CA264_01435 0.42 +0.3 341,924 + CA264_01435 0.67 -0.3 341,959 + CA264_01435 0.77 -0.9
Or see this region's nucleotide sequence