Strain Fitness in Agrobacterium fabrum C58 around Atu6096

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
115,843	+		Atu6094	0.79	-0.3
115,925	+		Atu6094	0.86	+0.9
115,925	+		Atu6094	0.86	+0.2
115,933	-		Atu6094	0.87	-0.2
115,933	-		Atu6094	0.87	-0.2
115,933	-		Atu6094	0.87	+0.0
115,933	-		Atu6094	0.87	+0.1
115,987	+				+0.4
116,016	+				+0.2
116,039	+				+0.2
116,045	+				+0.2
116,053	-				+1.2
116,053	-				+0.7
116,085	-				-0.0
116,104	+				-0.1
116,141	-				-0.7
116,149	+				-0.2
116,273	+				-0.3
116,273	+				+0.6
116,273	+				-0.4
116,273	+				+1.6
116,281	-				+1.6
116,281	-				+1.4
116,281	-				-1.0
116,307	-				+0.4
116,307	-				-0.1
116,323	+				+0.3
116,328	+				+0.1
116,331	-				-1.5
116,333	+				+0.0
116,333	+				-0.1
116,341	-				+0.7
116,341	-				+0.9
116,367	+				+0.6
116,377	+				-1.0
116,411	-		Atu6095	0.12	-1.7
116,411	-		Atu6095	0.12	+0.3
116,460	-		Atu6095	0.24	+0.3
116,512	+		Atu6095	0.36	-0.9
116,518	+		Atu6095	0.38	-1.2
116,539	+		Atu6095	0.43	-0.3
116,539	+		Atu6095	0.43	+0.3
116,539	+		Atu6095	0.43	+0.4
116,547	-		Atu6095	0.45	-0.6
116,593	+		Atu6095	0.56	-0.3
116,618	-		Atu6095	0.62	-1.2
116,622	+		Atu6095	0.63	-1.0
116,622	+		Atu6095	0.63	-0.7
116,635	+		Atu6095	0.66	-0.5
116,673	+		Atu6095	0.75	+0.3
116,675	+		Atu6095	0.76	+0.0
116,675	+		Atu6095	0.76	-0.5
116,683	-		Atu6095	0.78	-0.2
116,772	+				-0.0
116,865	-				+0.9
116,918	+				+0.3
116,918	+				+0.6
116,918	+				+0.1
116,918	+				+0.7
116,918	+				-0.0
116,918	+				-0.1
116,926	-				+0.2
116,926	-				-0.4
117,014	-		Atu6096	0.16	+1.2
117,018	+		Atu6096	0.17	-1.0
117,020	+		Atu6096	0.17	-0.5
117,037	+		Atu6096	0.18	+1.6
117,050	+		Atu6096	0.20	-0.3
117,053	-		Atu6096	0.20	+0.4
117,060	+		Atu6096	0.21	+1.0
117,073	+		Atu6096	0.22	-0.7
117,144	+		Atu6096	0.28	-0.3
117,232	+		Atu6096	0.36	+0.3
117,425	+		Atu6096	0.54	+0.8
117,487	-		Atu6096	0.60	+0.6
117,505	+		Atu6096	0.62	+0.3
117,510	+		Atu6096	0.62	+0.2
117,513	-		Atu6096	0.62	+0.2
117,520	+		Atu6096	0.63	+1.5
117,794	+		Atu6096	0.89	-0.2
117,794	+		Atu6096	0.89	-0.0
117,869	+				+0.6
117,869	+				+0.0
117,874	+				+0.3
117,877	-				+0.6
117,877	-				+0.6
117,911	+				-0.1
117,937	-				-0.1
117,956	+		Atu6097	0.13	-1.0
117,979	-		Atu6097	0.17	-0.6
118,000	-		Atu6097	0.20	+0.7
118,039	+		Atu6097	0.27	+0.4
118,127	+		Atu6097	0.42	-0.9
118,127	+		Atu6097	0.42	-1.2
118,128	+		Atu6097	0.42	-0.9
118,135	-		Atu6097	0.43	-0.8
118,135	-		Atu6097	0.43	+0.1
118,214	-		Atu6097	0.56	-1.2
118,250	-		Atu6097	0.62	-2.2
118,294	-		Atu6097	0.70	+0.2
118,297	+		Atu6097	0.70	-0.2
118,331	+		Atu6097	0.76	+0.1
118,400	+		Atu6097	0.87	-0.4
118,411	+		Atu6097	0.89	-0.5
118,423	+				+2.6
118,423	+				+0.1
118,423	+				+1.1
118,428	+				+0.0
118,431	-				-1.2
118,431	-				+0.2
118,431	-				+0.4
118,431	-				-0.8
118,436	-				+0.9
118,438	+				+0.1
118,446	-				+2.4
118,446	-				+0.3
118,513	+				-1.0
118,513	+				-0.3
118,858	-		Atu6098	0.84	-0.2