Strain Fitness in Agrobacterium fabrum C58 around Atu6078

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
92,329	+		Atu6077	0.35	-0.1
92,337	-		Atu6077	0.36	-0.7
92,348	-		Atu6077	0.37	+1.2
92,357	+		Atu6077	0.37	-0.3
92,514	+		Atu6077	0.48	-0.5
92,568	-		Atu6077	0.52	-0.6
92,579	-		Atu6077	0.52	+0.6
92,624	-		Atu6077	0.55	-0.0
92,666	-		Atu6077	0.58	-0.1
92,666	-		Atu6077	0.58	+0.9
92,666	-		Atu6077	0.58	+0.8
92,667	-		Atu6077	0.58	-0.5
92,667	-		Atu6077	0.58	+0.5
92,667	-		Atu6077	0.58	+0.6
92,680	+		Atu6077	0.59	-0.0
92,737	-		Atu6077	0.63	+0.1
92,776	+		Atu6077	0.66	-0.3
92,864	-		Atu6077	0.71	-0.1
92,870	+		Atu6077	0.72	-0.2
92,887	-		Atu6077	0.73	-0.7
92,919	+		Atu6077	0.75	+0.9
92,921	+		Atu6077	0.75	+2.6
92,943	+		Atu6077	0.77	-0.3
92,943	+		Atu6077	0.77	-0.7
92,943	+		Atu6077	0.77	+0.5
92,943	+		Atu6077	0.77	-1.9
92,948	+		Atu6077	0.77	+1.0
92,966	-		Atu6077	0.78	-0.4
92,968	+		Atu6077	0.78	-0.2
92,982	-		Atu6077	0.79	+1.6
93,012	-		Atu6077	0.81	+0.0
93,072	+		Atu6077	0.85	+0.3
93,079	+		Atu6077	0.86	-0.2
93,084	+		Atu6077	0.86	+0.3
93,084	+		Atu6077	0.86	-1.8
93,093	-		Atu6077	0.87	-1.2
93,101	+		Atu6077	0.87	+0.9
93,106	+		Atu6077	0.88	-0.6
93,106	+		Atu6077	0.88	-0.0
93,119	-		Atu6077	0.89	+0.5
93,133	+		Atu6077	0.90	+1.6
93,133	+		Atu6077	0.90	+0.2
93,141	-				-0.4
93,146	-				+0.9
93,153	+				-0.5
93,153	+				+0.4
93,158	+				+0.2
93,161	-				+0.4
93,162	+				+0.4
93,162	+				-0.0
93,166	-				+0.2
93,204	+				-0.7
93,204	+				-0.3
93,210	-				+0.4
93,210	-				-0.3
93,227	-				-1.7
93,262	-				-0.0
93,297	+				+1.1
93,385	+				-0.1
93,401	-				+0.5
93,424	+		Atu6078	0.10	-0.0
93,427	+		Atu6078	0.10	-0.2
93,432	-		Atu6078	0.11	+0.4
93,437	+		Atu6078	0.11	+1.6
93,513	+		Atu6078	0.17	-0.2
93,513	+		Atu6078	0.17	+0.2
93,518	+		Atu6078	0.18	+1.0
93,567	+		Atu6078	0.22	+0.2
93,569	+		Atu6078	0.22	-0.5
93,593	-		Atu6078	0.24	-1.2
93,598	-		Atu6078	0.24	+1.6
93,730	-		Atu6078	0.35	+1.0
93,815	-		Atu6078	0.42	-0.5
93,823	-		Atu6078	0.43	-0.0
93,845	+		Atu6078	0.44	-0.4
93,845	+		Atu6078	0.44	-0.6
93,853	+		Atu6078	0.45	-0.0
93,853	-		Atu6078	0.45	-0.4
93,853	-		Atu6078	0.45	+1.2
93,882	+		Atu6078	0.48	-0.7
93,931	-		Atu6078	0.52	-0.1
93,951	+		Atu6078	0.53	+1.0
93,981	+		Atu6078	0.56	+1.0
94,131	+		Atu6078	0.68	+0.4
94,139	-		Atu6078	0.68	+1.9
94,139	-		Atu6078	0.68	-0.2
94,141	+		Atu6078	0.69	+1.3
94,142	+		Atu6078	0.69	+1.6
94,149	-		Atu6078	0.69	+0.1
94,150	-		Atu6078	0.69	+1.6
94,210	+		Atu6078	0.74	-0.7
94,211	+		Atu6078	0.74	+0.4
94,221	+		Atu6078	0.75	+1.0
94,226	+		Atu6078	0.76	+2.6
94,231	+		Atu6078	0.76	+0.1
94,234	-		Atu6078	0.76	+1.1
94,260	+		Atu6078	0.78	+0.1
94,270	+		Atu6078	0.79	-0.5
94,278	-		Atu6078	0.80	+0.8
94,316	+		Atu6078	0.83	+0.3
94,380	+		Atu6078	0.88	+0.0
94,388	-		Atu6078	0.89	-0.7
94,393	+		Atu6078	0.89	+0.0
94,397	-		Atu6078	0.89	+1.2
94,502	-				+0.3
94,507	+				-0.7
94,507	+				-0.2
94,561	-				-0.4
94,596	+				-0.7
94,596	+				+0.4
94,630	-				+1.9
94,630	-				+0.4
94,746	-		Atu6079	0.17	-0.1
94,848	-		Atu6079	0.25	-1.2
94,850	+		Atu6079	0.25	+0.4
94,869	-		Atu6079	0.27	-0.7
94,884	-		Atu6079	0.28	+0.1
95,036	-		Atu6079	0.40	+0.9
95,045	+		Atu6079	0.40	-1.3
95,051	+		Atu6079	0.41	+0.3
95,059	-		Atu6079	0.42	+2.6
95,066	+		Atu6079	0.42	-0.5
95,096	+		Atu6079	0.44	+0.8
95,097	+		Atu6079	0.44	-1.2
95,108	+		Atu6079	0.45	-0.7
95,117	+		Atu6079	0.46	+1.3
95,125	-		Atu6079	0.47	+0.2
95,150	-		Atu6079	0.49	-0.7
95,178	+		Atu6079	0.51	+2.6
95,214	-		Atu6079	0.54	-0.3
95,230	-		Atu6079	0.55	-0.1
95,330	-		Atu6079	0.62	+0.6
95,331	-		Atu6079	0.63	+0.2
95,374	+		Atu6079	0.66	-0.1
95,382	-		Atu6079	0.67	-1.7
95,449	+		Atu6079	0.72	-0.2
95,457	-		Atu6079	0.72	-0.6
95,457	-		Atu6079	0.72	+0.6
95,457	-		Atu6079	0.72	-1.2
95,457	-		Atu6079	0.72	-0.0