Experiment: LB
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Atu5462 and Atu5463 overlap by 4 nucleotides Atu5463 and Atu5464 overlap by 4 nucleotides Atu5464 and Atu5465 are separated by 3 nucleotides Atu5465 and Atu5466 are separated by 55 nucleotides
Atu5462: Atu5462 - ABC transporter nucleotide binding/ATPase, at 454,632 to 455,714
Atu5462
Atu5463: Atu5463 - putative UDP-glucose 4-epimerase, at 455,711 to 456,694
Atu5463
Atu5464: Atu5464 - IclR family transcriptional regulator, at 456,691 to 458,373
Atu5464
Atu5465: Atu5465 - 3-oxoacyl-ACP reductase, at 458,377 to 459,138
Atu5465
Atu5466: Atu5466 - potassium uptake protein, at 459,194 to 461,107
Atu5466
Position (kb) 456
457
458
459 Strain fitness (log2 ratio) -2
-1
0
1
2 at 455.716 kb on - strand at 455.793 kb on + strand at 455.801 kb on - strand at 455.853 kb on + strand, within Atu5463 at 455.907 kb on + strand, within Atu5463 at 456.000 kb on + strand, within Atu5463 at 456.056 kb on + strand, within Atu5463 at 456.079 kb on - strand, within Atu5463 at 456.085 kb on + strand, within Atu5463 at 456.120 kb on - strand, within Atu5463 at 456.207 kb on - strand, within Atu5463 at 456.212 kb on - strand, within Atu5463 at 456.267 kb on + strand, within Atu5463 at 456.326 kb on + strand, within Atu5463 at 456.410 kb on - strand, within Atu5463 at 456.422 kb on - strand, within Atu5463 at 456.426 kb on + strand, within Atu5463 at 456.436 kb on - strand, within Atu5463 at 456.448 kb on + strand, within Atu5463 at 456.726 kb on + strand at 456.733 kb on + strand at 456.734 kb on + strand at 456.808 kb on - strand at 456.843 kb on - strand at 456.926 kb on + strand, within Atu5464 at 456.935 kb on - strand, within Atu5464 at 457.001 kb on + strand, within Atu5464 at 457.090 kb on - strand, within Atu5464 at 457.099 kb on + strand, within Atu5464 at 457.206 kb on - strand, within Atu5464 at 457.206 kb on - strand, within Atu5464 at 457.259 kb on - strand, within Atu5464 at 457.315 kb on + strand, within Atu5464 at 457.323 kb on - strand, within Atu5464 at 457.323 kb on - strand, within Atu5464 at 457.461 kb on - strand, within Atu5464 at 457.520 kb on - strand, within Atu5464 at 457.524 kb on + strand, within Atu5464 at 457.532 kb on - strand, within Atu5464 at 457.579 kb on + strand, within Atu5464 at 457.586 kb on - strand, within Atu5464 at 457.604 kb on + strand, within Atu5464 at 457.606 kb on + strand, within Atu5464 at 457.671 kb on - strand, within Atu5464 at 457.729 kb on - strand, within Atu5464 at 457.759 kb on + strand, within Atu5464 at 457.759 kb on + strand, within Atu5464 at 457.786 kb on + strand, within Atu5464 at 457.868 kb on - strand, within Atu5464 at 457.874 kb on - strand, within Atu5464 at 457.980 kb on + strand, within Atu5464 at 458.005 kb on - strand, within Atu5464 at 458.093 kb on + strand, within Atu5464 at 458.114 kb on + strand, within Atu5464 at 458.224 kb on - strand at 458.250 kb on + strand at 458.282 kb on + strand at 458.282 kb on + strand at 458.369 kb on - strand at 458.436 kb on - strand at 458.436 kb on - strand at 458.499 kb on - strand, within Atu5465 at 458.501 kb on + strand, within Atu5465 at 458.501 kb on + strand, within Atu5465 at 458.501 kb on + strand, within Atu5465 at 458.501 kb on + strand, within Atu5465 at 458.509 kb on - strand, within Atu5465 at 458.509 kb on - strand, within Atu5465 at 458.558 kb on - strand, within Atu5465 at 458.558 kb on - strand, within Atu5465 at 458.606 kb on + strand, within Atu5465 at 458.606 kb on + strand, within Atu5465 at 458.608 kb on - strand, within Atu5465 at 458.670 kb on + strand, within Atu5465 at 458.678 kb on - strand, within Atu5465 at 458.741 kb on - strand, within Atu5465 at 458.741 kb on - strand, within Atu5465 at 458.793 kb on - strand, within Atu5465 at 458.799 kb on + strand, within Atu5465 at 458.823 kb on + strand, within Atu5465 at 458.831 kb on - strand, within Atu5465 at 458.925 kb on + strand, within Atu5465 at 458.925 kb on + strand, within Atu5465 at 458.933 kb on - strand, within Atu5465 at 458.949 kb on + strand, within Atu5465 at 458.954 kb on + strand, within Atu5465 at 458.969 kb on - strand, within Atu5465 at 459.004 kb on - strand, within Atu5465 at 459.067 kb on + strand at 459.075 kb on - strand at 459.095 kb on + strand at 459.206 kb on - strand at 459.253 kb on - strand at 459.295 kb on - strand at 459.346 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction LB remove 455,716 - +0.1 455,793 + -0.9 455,801 - +0.2 455,853 + Atu5463 0.14 +0.1 455,907 + Atu5463 0.20 -0.8 456,000 + Atu5463 0.29 -1.1 456,056 + Atu5463 0.35 +0.3 456,079 - Atu5463 0.37 +0.5 456,085 + Atu5463 0.38 -0.2 456,120 - Atu5463 0.42 +1.1 456,207 - Atu5463 0.50 +0.2 456,212 - Atu5463 0.51 +2.0 456,267 + Atu5463 0.57 +1.2 456,326 + Atu5463 0.62 -0.2 456,410 - Atu5463 0.71 -0.2 456,422 - Atu5463 0.72 -1.7 456,426 + Atu5463 0.73 +0.6 456,436 - Atu5463 0.74 -1.2 456,448 + Atu5463 0.75 -0.9 456,726 + -1.4 456,733 + -0.2 456,734 + +0.7 456,808 - -0.4 456,843 - -0.9 456,926 + Atu5464 0.14 +1.4 456,935 - Atu5464 0.14 -1.4 457,001 + Atu5464 0.18 +0.5 457,090 - Atu5464 0.24 +0.1 457,099 + Atu5464 0.24 +0.2 457,206 - Atu5464 0.31 -0.5 457,206 - Atu5464 0.31 +1.0 457,259 - Atu5464 0.34 -0.4 457,315 + Atu5464 0.37 +0.5 457,323 - Atu5464 0.38 +2.0 457,323 - Atu5464 0.38 +0.2 457,461 - Atu5464 0.46 -1.7 457,520 - Atu5464 0.49 +0.8 457,524 + Atu5464 0.49 -0.2 457,532 - Atu5464 0.50 +1.4 457,579 + Atu5464 0.53 +0.2 457,586 - Atu5464 0.53 +1.9 457,604 + Atu5464 0.54 -0.7 457,606 + Atu5464 0.54 +0.6 457,671 - Atu5464 0.58 +1.4 457,729 - Atu5464 0.62 +0.1 457,759 + Atu5464 0.63 +0.4 457,759 + Atu5464 0.63 -0.3 457,786 + Atu5464 0.65 +0.4 457,868 - Atu5464 0.70 +1.1 457,874 - Atu5464 0.70 -0.2 457,980 + Atu5464 0.77 +0.7 458,005 - Atu5464 0.78 +0.9 458,093 + Atu5464 0.83 -0.2 458,114 + Atu5464 0.85 +0.2 458,224 - -1.9 458,250 + +0.6 458,282 + -0.6 458,282 + -0.5 458,369 - -0.0 458,436 - -0.5 458,436 - -0.8 458,499 - Atu5465 0.16 +0.6 458,501 + Atu5465 0.16 -1.2 458,501 + Atu5465 0.16 -0.2 458,501 + Atu5465 0.16 +0.9 458,501 + Atu5465 0.16 -0.5 458,509 - Atu5465 0.17 -0.4 458,509 - Atu5465 0.17 -0.3 458,558 - Atu5465 0.24 -1.6 458,558 - Atu5465 0.24 -0.3 458,606 + Atu5465 0.30 +0.2 458,606 + Atu5465 0.30 +0.1 458,608 - Atu5465 0.30 -0.2 458,670 + Atu5465 0.38 +1.2 458,678 - Atu5465 0.40 -0.9 458,741 - Atu5465 0.48 +1.6 458,741 - Atu5465 0.48 -0.0 458,793 - Atu5465 0.55 +1.2 458,799 + Atu5465 0.55 -0.3 458,823 + Atu5465 0.59 +0.1 458,831 - Atu5465 0.60 +0.2 458,925 + Atu5465 0.72 -1.6 458,925 + Atu5465 0.72 +0.4 458,933 - Atu5465 0.73 +0.1 458,949 + Atu5465 0.75 -0.1 458,954 + Atu5465 0.76 +0.7 458,969 - Atu5465 0.78 +0.6 459,004 - Atu5465 0.82 +0.4 459,067 + -0.4 459,075 - +0.6 459,095 + -1.0 459,206 - -0.1 459,253 - -0.8 459,295 - +2.6 459,346 + +0.1
Or see this region's nucleotide sequence