Strain Fitness in Agrobacterium fabrum C58 around Atu5078

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
77,511	+				-0.2
77,511	+				-0.3
77,511	+				+0.3
77,511	+				+0.8
77,519	-				-0.0
77,519	-				+0.0
77,519	-				+0.4
77,519	-				+0.8
77,555	-				-0.3
77,588	-				+1.4
77,628	-				-1.8
77,724	+				+0.7
77,758	+				+0.6
77,758	+				+0.4
77,758	+				+1.4
77,758	+				-1.3
77,766	-				+0.4
77,766	-				+0.7
77,815	+				+0.9
77,911	-				+2.5
78,056	-		Atu8057	0.43	+0.8
78,115	-		Atu8057	0.61	+0.2
78,172	+		Atu8057	0.78	-0.2
78,192	-		Atu8057	0.84	-0.3
78,192	-		Atu8057	0.84	-0.6
78,231	+				-0.4
78,239	-				-0.5
78,294	+				-0.3
78,294	+				+0.6
78,294	+				-2.5
78,309	+				-0.0
78,309	+				+0.8
78,309	+				-1.2
78,314	+				-0.2
78,321	-				+0.4
78,354	+				+0.4
78,379	+				+0.9
78,539	+				+0.4
78,588	+				-0.3
78,588	+				-0.2
78,605	+				-0.5
78,733	+		Atu5078	0.21	+1.0
78,825	+		Atu5078	0.30	-0.1
78,851	+		Atu5078	0.32	+0.9
78,871	+		Atu5078	0.34	+0.2
78,994	+		Atu5078	0.46	+1.0
78,994	+		Atu5078	0.46	-0.4
79,065	+		Atu5078	0.53	+1.6
79,137	+		Atu5078	0.59	+0.8
79,154	+		Atu5078	0.61	+0.2
79,164	+		Atu5078	0.62	-0.4
79,222	+		Atu5078	0.67	-0.0
79,274	+		Atu5078	0.72	+0.6
79,303	+		Atu5078	0.75	+1.7
79,315	+		Atu5078	0.76	-0.0
79,315	+		Atu5078	0.76	-1.0
79,341	+		Atu5078	0.79	+0.2
79,404	+		Atu5078	0.84	-0.4
79,519	+				+1.3
79,530	+				+0.1
79,654	-				+0.5
79,698	-				+0.2
79,698	-				-0.5
79,767	-				-0.5
79,789	+				-0.2
79,937	+				-1.3
79,937	+				+1.0
79,962	+				-1.4
79,962	+				-0.0
79,971	-				+0.3
80,023	+				+0.5
80,028	+				+1.2
80,036	-				+0.7
80,064	+				-0.8
80,064	+				-0.2
80,072	-				-0.3
80,122	+				+0.6
80,122	+				-1.1
80,122	+				+1.7
80,132	+				-0.0
80,198	+				-1.5
80,206	-				-1.3
80,211	-				+1.1
80,224	-				-1.9
80,255	-				-0.5
80,303	+				-0.0
80,308	+				+0.8
80,316	-				+0.3
80,451	+				-0.5