Strain Fitness in Agrobacterium fabrum C58 around Atu4757

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
1,924,627	-				+0.1
1,924,683	-		Atu4756	0.11	+0.0
1,924,683	-		Atu4756	0.11	-1.1
1,924,717	-		Atu4756	0.14	+0.2
1,924,717	-		Atu4756	0.14	-0.0
1,924,726	+		Atu4756	0.15	-0.3
1,924,814	+		Atu4756	0.24	+0.6
1,925,035	-		Atu4756	0.46	-0.7
1,925,073	+		Atu4756	0.49	-2.1
1,925,099	+		Atu4756	0.52	-0.9
1,925,307	-		Atu4756	0.72	-0.5
1,925,418	-		Atu4756	0.83	-0.4
1,925,480	-		Atu4756	0.89	+0.0
1,925,512	+				-1.0
1,925,578	+				-0.7
1,925,613	-				-0.1
1,925,626	-				+0.4
1,925,710	-		Atu4757	0.10	+1.7
1,925,757	+		Atu4757	0.14	+0.2
1,925,765	-		Atu4757	0.15	+0.7
1,925,994	-		Atu4757	0.34	-0.1
1,926,109	+		Atu4757	0.44	-0.1
1,926,417	+		Atu4757	0.70	+0.8
1,926,425	-		Atu4757	0.71	-0.5
1,926,613	-		Atu4757	0.87	+0.8
1,926,681	+				-0.9
1,926,819	-				-0.5
1,926,858	+				-0.2
1,926,858	+				+0.3
1,926,898	-		Atu4758	0.13	-0.0
1,926,916	+		Atu4758	0.15	-1.0
1,926,948	-		Atu4758	0.18	-1.5
1,926,948	-		Atu4758	0.18	+0.0
1,926,957	+		Atu4758	0.19	-0.2
1,926,958	+		Atu4758	0.19	-0.5
1,926,980	-		Atu4758	0.21	+1.2
1,927,004	-		Atu4758	0.24	+0.4
1,927,069	-		Atu4758	0.30	+0.0
1,927,186	+		Atu4758	0.42	-0.0
1,927,189	-		Atu4758	0.42	-0.6
1,927,226	+		Atu4758	0.45	-0.1
1,927,303	+		Atu4758	0.53	+0.7
1,927,458	+		Atu4758	0.68	-0.3
1,927,458	+		Atu4758	0.68	+0.0
1,927,466	+		Atu4758	0.69	+0.2
1,927,466	-		Atu4758	0.69	+0.2
1,927,481	+		Atu4758	0.71	-0.7
1,927,515	+		Atu4758	0.74	-0.8
1,927,663	+		Atu4758	0.89	+0.1
1,927,697	+				+0.2
1,927,702	+				+0.6
1,927,729	-				+0.3