Strain Fitness in Agrobacterium fabrum C58 around Atu2336

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
2,312,974	-		Atu2334	0.84	-1.0
2,313,052	-				+0.4
2,313,052	-				+0.5
2,313,107	+				+1.3
2,313,115	-				-0.0
2,313,210	+				+0.3
2,313,235	+				+0.0
2,313,235	+				-0.1
2,313,453	-		Atu2335	0.43	-0.1
2,313,455	+		Atu2335	0.43	+0.3
2,313,667	-				-0.6
2,313,674	+				+0.2
2,313,674	+				-1.5
2,313,682	-				+0.5
2,313,682	-				-1.0
2,313,704	+				+1.7
2,313,712	-				+0.5
2,314,034	+		Atu2336	0.19	+0.7
2,314,042	-		Atu2336	0.21	+1.1
2,314,042	-		Atu2336	0.21	+0.7
2,314,091	+		Atu2336	0.28	+0.6
2,314,154	+		Atu2336	0.39	+0.4
2,314,232	+		Atu2336	0.51	-0.7
2,314,232	+		Atu2336	0.51	+0.5
2,314,273	-		Atu2336	0.58	+0.2
2,314,289	+		Atu2336	0.61	+0.5
2,314,291	+		Atu2336	0.61	+0.6
2,314,291	+		Atu2336	0.61	-0.4
2,314,299	-		Atu2336	0.62	+0.4
2,314,312	+		Atu2336	0.64	-1.5
2,314,315	+		Atu2336	0.65	+0.4
2,314,323	-		Atu2336	0.66	+0.2
2,314,323	-		Atu2336	0.66	+0.3
2,314,376	+		Atu2336	0.75	+0.8
2,314,381	+		Atu2336	0.75	+1.7
2,314,384	-		Atu2336	0.76	-0.5
2,314,462	+		Atu2336	0.89	+0.4
2,314,491	-				-0.2
2,314,506	-				-1.3
2,314,526	-				+0.5
2,314,530	+				-0.0
2,314,538	-				+0.3
2,314,566	-				-0.4
2,314,644	-				-0.0
2,314,853	+		Atu2337	0.27	+0.2
2,314,957	+		Atu2337	0.39	-0.3
2,314,965	-		Atu2337	0.39	+0.0
2,314,970	-		Atu2337	0.40	+0.1
2,315,008	-		Atu2337	0.44	+0.4
2,315,010	-		Atu2337	0.44	-0.2
2,315,022	+		Atu2337	0.46	+0.5
2,315,030	-		Atu2337	0.47	-0.3
2,315,052	-		Atu2337	0.49	-1.3
2,315,158	-		Atu2337	0.61	-0.1
2,315,201	+		Atu2337	0.66	-1.2
2,315,234	-		Atu2337	0.69	-0.6
2,315,244	-		Atu2337	0.71	+0.2
2,315,281	-		Atu2337	0.75	+0.0
2,315,308	+		Atu2337	0.78	-0.2
2,315,311	-		Atu2337	0.78	+0.7
2,315,390	-		Atu2337	0.87	+0.5
2,315,409	+		Atu2337	0.89	-0.9
2,315,430	-				+0.5
2,315,430	-				-0.5
2,315,448	+				+0.7
2,315,504	-				+0.2
2,315,512	-				+0.6
2,315,512	-				-0.0