Strain Fitness in Agrobacterium fabrum C58 around Atu1592
Experiment: LB
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | LB |
---|---|---|---|---|---|
remove | |||||
1,574,286 | + | -0.6 | |||
1,574,352 | - | -0.2 | |||
1,574,352 | - | +0.5 | |||
1,574,377 | - | +0.2 | |||
1,574,458 | + | Atu1591 | 0.11 | +0.7 | |
1,574,745 | - | Atu1591 | 0.47 | -0.4 | |
1,574,922 | - | Atu1591 | 0.69 | -0.8 | |
1,574,997 | + | Atu1591 | 0.78 | +1.1 | |
1,574,997 | + | Atu1591 | 0.78 | -0.1 | |
1,575,005 | - | Atu1591 | 0.79 | +0.7 | |
1,575,005 | - | Atu1591 | 0.79 | -3.4 | |
1,575,015 | - | Atu1591 | 0.80 | -0.2 | |
1,575,268 | + | +0.3 | |||
1,575,339 | - | Atu1592 | 0.16 | +0.8 | |
1,575,465 | + | Atu1592 | 0.34 | +0.2 | |
1,575,690 | + | Atu1592 | 0.66 | +0.6 | |
1,575,720 | - | Atu1592 | 0.71 | +0.1 | |
1,575,793 | + | Atu1592 | 0.81 | -0.6 | |
1,576,121 | - | -0.0 |
Or see this region's nucleotide sequence