Experiment: D-Glucose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABID97_RS24225 and ABID97_RS24230 overlap by 11 nucleotides ABID97_RS24230 and ABID97_RS24235 overlap by 4 nucleotides ABID97_RS24235 and ABID97_RS24240 are separated by 1 nucleotides
ABID97_RS24225: ABID97_RS24225 - methyltransferase, at 5,005,920 to 5,007,020
_RS24225
ABID97_RS24230: ABID97_RS24230 - DegT/DnrJ/EryC1/StrS family aminotransferase, at 5,007,010 to 5,008,200
_RS24230
ABID97_RS24235: ABID97_RS24235 - WbqC family protein, at 5,008,197 to 5,008,940
_RS24235
ABID97_RS24240: ABID97_RS24240 - hypothetical protein, at 5,008,942 to 5,009,958
_RS24240
Position (kb) 5007
5008
5009 Strain fitness (log2 ratio) -1
0
1
2
3 at 5006.060 kb on - strand, within ABID97_RS24225 at 5006.060 kb on - strand, within ABID97_RS24225 at 5006.060 kb on - strand, within ABID97_RS24225 at 5006.277 kb on + strand, within ABID97_RS24225 at 5006.277 kb on + strand, within ABID97_RS24225 at 5006.278 kb on - strand, within ABID97_RS24225 at 5006.278 kb on - strand, within ABID97_RS24225 at 5006.295 kb on + strand, within ABID97_RS24225 at 5006.296 kb on - strand, within ABID97_RS24225 at 5006.694 kb on + strand, within ABID97_RS24225 at 5006.695 kb on - strand, within ABID97_RS24225 at 5006.695 kb on - strand, within ABID97_RS24225 at 5006.695 kb on - strand, within ABID97_RS24225 at 5006.695 kb on - strand, within ABID97_RS24225 at 5006.695 kb on - strand, within ABID97_RS24225 at 5006.695 kb on - strand, within ABID97_RS24225 at 5006.901 kb on + strand, within ABID97_RS24225 at 5006.901 kb on + strand, within ABID97_RS24225 at 5006.901 kb on + strand, within ABID97_RS24225 at 5006.901 kb on + strand, within ABID97_RS24225 at 5006.902 kb on - strand, within ABID97_RS24225 at 5007.326 kb on - strand, within ABID97_RS24230 at 5007.399 kb on + strand, within ABID97_RS24230 at 5007.475 kb on + strand, within ABID97_RS24230 at 5007.475 kb on + strand, within ABID97_RS24230 at 5007.475 kb on + strand, within ABID97_RS24230 at 5007.476 kb on - strand, within ABID97_RS24230 at 5007.476 kb on - strand, within ABID97_RS24230 at 5007.476 kb on - strand, within ABID97_RS24230 at 5007.691 kb on + strand, within ABID97_RS24230 at 5007.691 kb on + strand, within ABID97_RS24230 at 5007.925 kb on + strand, within ABID97_RS24230 at 5007.926 kb on - strand, within ABID97_RS24230 at 5007.976 kb on + strand, within ABID97_RS24230 at 5007.977 kb on - strand, within ABID97_RS24230 at 5008.015 kb on + strand, within ABID97_RS24230 at 5008.048 kb on + strand, within ABID97_RS24230 at 5008.049 kb on - strand, within ABID97_RS24230 at 5008.231 kb on - strand at 5008.305 kb on + strand, within ABID97_RS24235 at 5008.365 kb on + strand, within ABID97_RS24235 at 5008.365 kb on + strand, within ABID97_RS24235 at 5008.365 kb on + strand, within ABID97_RS24235 at 5008.365 kb on + strand, within ABID97_RS24235 at 5008.365 kb on + strand, within ABID97_RS24235 at 5008.365 kb on + strand, within ABID97_RS24235 at 5008.366 kb on - strand, within ABID97_RS24235 at 5008.369 kb on + strand, within ABID97_RS24235 at 5008.369 kb on + strand, within ABID97_RS24235 at 5008.369 kb on + strand, within ABID97_RS24235 at 5008.370 kb on - strand, within ABID97_RS24235 at 5008.370 kb on - strand, within ABID97_RS24235 at 5008.474 kb on - strand, within ABID97_RS24235 at 5008.474 kb on - strand, within ABID97_RS24235 at 5008.746 kb on - strand, within ABID97_RS24235 at 5008.806 kb on + strand, within ABID97_RS24235 at 5008.807 kb on - strand, within ABID97_RS24235 at 5008.807 kb on - strand, within ABID97_RS24235 at 5009.049 kb on - strand, within ABID97_RS24240 at 5009.049 kb on - strand, within ABID97_RS24240 at 5009.125 kb on + strand, within ABID97_RS24240 at 5009.125 kb on + strand, within ABID97_RS24240 at 5009.125 kb on + strand, within ABID97_RS24240 at 5009.125 kb on + strand, within ABID97_RS24240 at 5009.125 kb on + strand, within ABID97_RS24240 at 5009.125 kb on + strand, within ABID97_RS24240 at 5009.182 kb on + strand, within ABID97_RS24240
Per-strain Table
Position Strand Gene LocusTag Fraction D-Glucose (C) remove 5,006,060 - ABID97_RS24225 0.13 +0.0 5,006,060 - ABID97_RS24225 0.13 +0.5 5,006,060 - ABID97_RS24225 0.13 -0.6 5,006,277 + ABID97_RS24225 0.32 +0.7 5,006,277 + ABID97_RS24225 0.32 -0.1 5,006,278 - ABID97_RS24225 0.33 +0.2 5,006,278 - ABID97_RS24225 0.33 +0.8 5,006,295 + ABID97_RS24225 0.34 +0.4 5,006,296 - ABID97_RS24225 0.34 -1.2 5,006,694 + ABID97_RS24225 0.70 -0.8 5,006,695 - ABID97_RS24225 0.70 -0.5 5,006,695 - ABID97_RS24225 0.70 -0.4 5,006,695 - ABID97_RS24225 0.70 -0.2 5,006,695 - ABID97_RS24225 0.70 +0.9 5,006,695 - ABID97_RS24225 0.70 -0.5 5,006,695 - ABID97_RS24225 0.70 +0.0 5,006,901 + ABID97_RS24225 0.89 +0.1 5,006,901 + ABID97_RS24225 0.89 +0.3 5,006,901 + ABID97_RS24225 0.89 -0.3 5,006,901 + ABID97_RS24225 0.89 +0.0 5,006,902 - ABID97_RS24225 0.89 +0.2 5,007,326 - ABID97_RS24230 0.27 +1.3 5,007,399 + ABID97_RS24230 0.33 +1.1 5,007,475 + ABID97_RS24230 0.39 +1.0 5,007,475 + ABID97_RS24230 0.39 +1.0 5,007,475 + ABID97_RS24230 0.39 +0.6 5,007,476 - ABID97_RS24230 0.39 +1.6 5,007,476 - ABID97_RS24230 0.39 +1.1 5,007,476 - ABID97_RS24230 0.39 +1.4 5,007,691 + ABID97_RS24230 0.57 +1.1 5,007,691 + ABID97_RS24230 0.57 +1.1 5,007,925 + ABID97_RS24230 0.77 +1.0 5,007,926 - ABID97_RS24230 0.77 +0.5 5,007,976 + ABID97_RS24230 0.81 +1.0 5,007,977 - ABID97_RS24230 0.81 +1.8 5,008,015 + ABID97_RS24230 0.84 +1.0 5,008,048 + ABID97_RS24230 0.87 +1.0 5,008,049 - ABID97_RS24230 0.87 +1.1 5,008,231 - +0.8 5,008,305 + ABID97_RS24235 0.15 -0.4 5,008,365 + ABID97_RS24235 0.23 +2.7 5,008,365 + ABID97_RS24235 0.23 +1.2 5,008,365 + ABID97_RS24235 0.23 +0.8 5,008,365 + ABID97_RS24235 0.23 +0.8 5,008,365 + ABID97_RS24235 0.23 +1.0 5,008,365 + ABID97_RS24235 0.23 +3.6 5,008,366 - ABID97_RS24235 0.23 +0.9 5,008,369 + ABID97_RS24235 0.23 +1.0 5,008,369 + ABID97_RS24235 0.23 +1.2 5,008,369 + ABID97_RS24235 0.23 +0.7 5,008,370 - ABID97_RS24235 0.23 +1.4 5,008,370 - ABID97_RS24235 0.23 +0.6 5,008,474 - ABID97_RS24235 0.37 +0.9 5,008,474 - ABID97_RS24235 0.37 +0.8 5,008,746 - ABID97_RS24235 0.74 +1.0 5,008,806 + ABID97_RS24235 0.82 +1.3 5,008,807 - ABID97_RS24235 0.82 +1.1 5,008,807 - ABID97_RS24235 0.82 +1.0 5,009,049 - ABID97_RS24240 0.11 +1.0 5,009,049 - ABID97_RS24240 0.11 +0.6 5,009,125 + ABID97_RS24240 0.18 +0.9 5,009,125 + ABID97_RS24240 0.18 +0.6 5,009,125 + ABID97_RS24240 0.18 +1.1 5,009,125 + ABID97_RS24240 0.18 +1.1 5,009,125 + ABID97_RS24240 0.18 +1.1 5,009,125 + ABID97_RS24240 0.18 +1.0 5,009,182 + ABID97_RS24240 0.24 +0.9
Or see this region's nucleotide sequence