Experiment: D-Glucose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABID97_RS11570 and ABID97_RS11575 are separated by 255 nucleotides ABID97_RS11575 and ABID97_RS11580 are separated by 70 nucleotides ABID97_RS11580 and ABID97_RS11585 are separated by 82 nucleotides
ABID97_RS11570: ABID97_RS11570 - carbon-nitrogen hydrolase family protein, at 2,390,037 to 2,391,050
_RS11570
ABID97_RS11575: ABID97_RS11575 - phosphotransferase, at 2,391,306 to 2,392,385
_RS11575
ABID97_RS11580: ABID97_RS11580 - SDR family oxidoreductase, at 2,392,456 to 2,393,157
_RS11580
ABID97_RS11585: ABID97_RS11585 - glucose 1-dehydrogenase, at 2,393,240 to 2,393,989
_RS11585
Position (kb)
2391
2392
2393 Strain fitness (log2 ratio)
-1
0
1 at 2390.322 kb on + strand, within ABID97_RS11570 at 2390.374 kb on - strand, within ABID97_RS11570 at 2390.559 kb on + strand, within ABID97_RS11570 at 2390.568 kb on + strand, within ABID97_RS11570 at 2390.569 kb on - strand, within ABID97_RS11570 at 2390.676 kb on + strand, within ABID97_RS11570 at 2390.677 kb on - strand, within ABID97_RS11570 at 2390.698 kb on - strand, within ABID97_RS11570 at 2390.698 kb on - strand, within ABID97_RS11570 at 2390.698 kb on - strand, within ABID97_RS11570 at 2390.806 kb on - strand, within ABID97_RS11570 at 2390.806 kb on - strand, within ABID97_RS11570 at 2390.865 kb on + strand, within ABID97_RS11570 at 2390.865 kb on + strand, within ABID97_RS11570 at 2390.910 kb on + strand, within ABID97_RS11570 at 2391.004 kb on - strand at 2391.088 kb on + strand at 2391.127 kb on + strand at 2391.529 kb on + strand, within ABID97_RS11575 at 2391.529 kb on + strand, within ABID97_RS11575 at 2391.529 kb on + strand, within ABID97_RS11575 at 2391.530 kb on - strand, within ABID97_RS11575 at 2391.530 kb on - strand, within ABID97_RS11575 at 2391.774 kb on + strand, within ABID97_RS11575 at 2391.877 kb on + strand, within ABID97_RS11575 at 2391.878 kb on - strand, within ABID97_RS11575 at 2391.895 kb on + strand, within ABID97_RS11575 at 2391.895 kb on + strand, within ABID97_RS11575 at 2391.895 kb on + strand, within ABID97_RS11575 at 2392.087 kb on + strand, within ABID97_RS11575 at 2392.234 kb on + strand, within ABID97_RS11575 at 2392.235 kb on - strand, within ABID97_RS11575 at 2392.417 kb on + strand at 2392.418 kb on - strand at 2392.418 kb on - strand at 2392.472 kb on + strand at 2392.730 kb on + strand, within ABID97_RS11580 at 2392.731 kb on - strand, within ABID97_RS11580 at 2392.731 kb on - strand, within ABID97_RS11580 at 2392.900 kb on + strand, within ABID97_RS11580 at 2393.057 kb on + strand, within ABID97_RS11580 at 2393.217 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction D-Glucose (C) remove 2,390,322 + ABID97_RS11570 0.28 +0.1 2,390,374 - ABID97_RS11570 0.33 -0.2 2,390,559 + ABID97_RS11570 0.51 +1.7 2,390,568 + ABID97_RS11570 0.52 -0.0 2,390,569 - ABID97_RS11570 0.52 +0.2 2,390,676 + ABID97_RS11570 0.63 +0.3 2,390,677 - ABID97_RS11570 0.63 -0.2 2,390,698 - ABID97_RS11570 0.65 -1.7 2,390,698 - ABID97_RS11570 0.65 +0.2 2,390,698 - ABID97_RS11570 0.65 -0.4 2,390,806 - ABID97_RS11570 0.76 +0.1 2,390,806 - ABID97_RS11570 0.76 -0.1 2,390,865 + ABID97_RS11570 0.82 +1.0 2,390,865 + ABID97_RS11570 0.82 -0.4 2,390,910 + ABID97_RS11570 0.86 +0.8 2,391,004 - +0.2 2,391,088 + -0.4 2,391,127 + +0.4 2,391,529 + ABID97_RS11575 0.21 +0.2 2,391,529 + ABID97_RS11575 0.21 +0.1 2,391,529 + ABID97_RS11575 0.21 -0.3 2,391,530 - ABID97_RS11575 0.21 -0.6 2,391,530 - ABID97_RS11575 0.21 +0.5 2,391,774 + ABID97_RS11575 0.43 +0.4 2,391,877 + ABID97_RS11575 0.53 -0.3 2,391,878 - ABID97_RS11575 0.53 -0.3 2,391,895 + ABID97_RS11575 0.55 -0.3 2,391,895 + ABID97_RS11575 0.55 +0.7 2,391,895 + ABID97_RS11575 0.55 +0.9 2,392,087 + ABID97_RS11575 0.72 +1.4 2,392,234 + ABID97_RS11575 0.86 +0.0 2,392,235 - ABID97_RS11575 0.86 +0.2 2,392,417 + -0.6 2,392,418 - -0.2 2,392,418 - +0.1 2,392,472 + +0.0 2,392,730 + ABID97_RS11580 0.39 +0.6 2,392,731 - ABID97_RS11580 0.39 -0.4 2,392,731 - ABID97_RS11580 0.39 +0.2 2,392,900 + ABID97_RS11580 0.63 +0.6 2,393,057 + ABID97_RS11580 0.86 +1.1 2,393,217 + +0.1
Or see this region's nucleotide sequence