Experiment: D-Glucose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABID97_RS04785 and ABID97_RS04790 are separated by 18 nucleotides ABID97_RS04790 and ABID97_RS04795 are separated by 51 nucleotides ABID97_RS04795 and ABID97_RS04800 overlap by 4 nucleotides
ABID97_RS04785: ABID97_RS04785 - phospholipase D family protein, at 997,454 to 999,058
_RS04785
ABID97_RS04790: ABID97_RS04790 - YceI family protein, at 999,077 to 999,709
_RS04790
ABID97_RS04795: ABID97_RS04795 - YceI family protein, at 999,761 to 1,000,339
_RS04795
ABID97_RS04800: ABID97_RS04800 - cytochrome b/b6 domain-containing protein, at 1,000,336 to 1,000,914
_RS04800
Position (kb) 999
1000 Strain fitness (log2 ratio) -1
0
1 at 998.144 kb on + strand, within ABID97_RS04785 at 998.145 kb on - strand, within ABID97_RS04785 at 998.145 kb on - strand, within ABID97_RS04785 at 998.159 kb on + strand, within ABID97_RS04785 at 998.358 kb on - strand, within ABID97_RS04785 at 998.399 kb on + strand, within ABID97_RS04785 at 998.400 kb on - strand, within ABID97_RS04785 at 998.400 kb on - strand, within ABID97_RS04785 at 998.438 kb on + strand, within ABID97_RS04785 at 998.439 kb on - strand, within ABID97_RS04785 at 998.439 kb on - strand, within ABID97_RS04785 at 998.439 kb on - strand, within ABID97_RS04785 at 998.496 kb on - strand, within ABID97_RS04785 at 998.615 kb on + strand, within ABID97_RS04785 at 999.232 kb on - strand, within ABID97_RS04790 at 999.535 kb on - strand, within ABID97_RS04790 at 999.549 kb on + strand, within ABID97_RS04790 at 999.549 kb on + strand, within ABID97_RS04790 at 999.549 kb on + strand, within ABID97_RS04790 at 999.549 kb on + strand, within ABID97_RS04790 at 999.550 kb on - strand, within ABID97_RS04790 at 999.582 kb on + strand, within ABID97_RS04790 at 999.582 kb on + strand, within ABID97_RS04790 at 999.582 kb on + strand, within ABID97_RS04790 at 999.583 kb on - strand, within ABID97_RS04790 at 999.583 kb on - strand, within ABID97_RS04790 at 999.583 kb on - strand, within ABID97_RS04790 at 999.583 kb on - strand, within ABID97_RS04790 at 999.639 kb on + strand at 999.640 kb on - strand, within ABID97_RS04790 at 999.858 kb on + strand, within ABID97_RS04795 at 999.858 kb on + strand, within ABID97_RS04795 at 999.858 kb on + strand, within ABID97_RS04795 at 999.859 kb on - strand, within ABID97_RS04795 at 1000.574 kb on + strand, within ABID97_RS04800 at 1000.575 kb on - strand, within ABID97_RS04800 at 1000.575 kb on - strand, within ABID97_RS04800 at 1000.613 kb on + strand, within ABID97_RS04800 at 1000.613 kb on + strand, within ABID97_RS04800 at 1000.613 kb on + strand, within ABID97_RS04800 at 1000.614 kb on - strand, within ABID97_RS04800 at 1000.614 kb on - strand, within ABID97_RS04800
Per-strain Table
Position Strand Gene LocusTag Fraction D-Glucose (C) remove 998,144 + ABID97_RS04785 0.43 -0.2 998,145 - ABID97_RS04785 0.43 -0.2 998,145 - ABID97_RS04785 0.43 +0.1 998,159 + ABID97_RS04785 0.44 -0.8 998,358 - ABID97_RS04785 0.56 -1.0 998,399 + ABID97_RS04785 0.59 +0.0 998,400 - ABID97_RS04785 0.59 -0.7 998,400 - ABID97_RS04785 0.59 -0.1 998,438 + ABID97_RS04785 0.61 -0.4 998,439 - ABID97_RS04785 0.61 -0.5 998,439 - ABID97_RS04785 0.61 -1.0 998,439 - ABID97_RS04785 0.61 -1.1 998,496 - ABID97_RS04785 0.65 -1.2 998,615 + ABID97_RS04785 0.72 -0.1 999,232 - ABID97_RS04790 0.24 +0.0 999,535 - ABID97_RS04790 0.72 -0.3 999,549 + ABID97_RS04790 0.75 -0.9 999,549 + ABID97_RS04790 0.75 -0.4 999,549 + ABID97_RS04790 0.75 -0.2 999,549 + ABID97_RS04790 0.75 -0.2 999,550 - ABID97_RS04790 0.75 +0.4 999,582 + ABID97_RS04790 0.80 -0.3 999,582 + ABID97_RS04790 0.80 -0.2 999,582 + ABID97_RS04790 0.80 -0.2 999,583 - ABID97_RS04790 0.80 -0.8 999,583 - ABID97_RS04790 0.80 -0.9 999,583 - ABID97_RS04790 0.80 -0.3 999,583 - ABID97_RS04790 0.80 -0.6 999,639 + +0.8 999,640 - ABID97_RS04790 0.89 -0.5 999,858 + ABID97_RS04795 0.17 -0.4 999,858 + ABID97_RS04795 0.17 -0.3 999,858 + ABID97_RS04795 0.17 -0.6 999,859 - ABID97_RS04795 0.17 -0.5 1,000,574 + ABID97_RS04800 0.41 +0.4 1,000,575 - ABID97_RS04800 0.41 +0.2 1,000,575 - ABID97_RS04800 0.41 -0.6 1,000,613 + ABID97_RS04800 0.48 +0.4 1,000,613 + ABID97_RS04800 0.48 -0.8 1,000,613 + ABID97_RS04800 0.48 -0.0 1,000,614 - ABID97_RS04800 0.48 -0.8 1,000,614 - ABID97_RS04800 0.48 -0.3
Or see this region's nucleotide sequence