Experiment: Cadmium acetate 40 uM, aerobic
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt IAI46_23625 and IAI46_23630 are separated by 357 nucleotides IAI46_23630 and IAI46_23635 overlap by 4 nucleotides
IAI46_23625: IAI46_23625 - peptidylprolyl isomerase A, at 5,024,222 to 5,024,791
_23625
IAI46_23630: IAI46_23630 - PTS lactose/cellobiose transporter subunit IIA, at 5,025,149 to 5,025,487
_23630
IAI46_23635: IAI46_23635 - 6-phospho-beta-glucosidase, at 5,025,484 to 5,026,791
_23635
Position (kb)
5025
5026 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 5024.254 kb on + strand at 5024.255 kb on - strand at 5024.255 kb on - strand at 5024.255 kb on - strand at 5024.255 kb on - strand at 5024.260 kb on + strand at 5024.261 kb on - strand at 5024.261 kb on - strand at 5024.318 kb on + strand, within IAI46_23625 at 5024.318 kb on + strand, within IAI46_23625 at 5024.318 kb on + strand, within IAI46_23625 at 5024.318 kb on + strand, within IAI46_23625 at 5024.318 kb on + strand, within IAI46_23625 at 5024.425 kb on + strand, within IAI46_23625 at 5024.426 kb on - strand, within IAI46_23625 at 5024.426 kb on - strand, within IAI46_23625 at 5024.426 kb on - strand, within IAI46_23625 at 5024.426 kb on - strand, within IAI46_23625 at 5024.437 kb on + strand, within IAI46_23625 at 5024.462 kb on - strand, within IAI46_23625 at 5024.542 kb on + strand, within IAI46_23625 at 5024.563 kb on + strand, within IAI46_23625 at 5024.563 kb on + strand, within IAI46_23625 at 5024.590 kb on + strand, within IAI46_23625 at 5024.590 kb on + strand, within IAI46_23625 at 5024.591 kb on - strand, within IAI46_23625 at 5024.591 kb on - strand, within IAI46_23625 at 5024.591 kb on - strand, within IAI46_23625 at 5024.591 kb on - strand, within IAI46_23625 at 5024.601 kb on + strand, within IAI46_23625 at 5024.601 kb on + strand, within IAI46_23625 at 5024.605 kb on - strand, within IAI46_23625 at 5024.619 kb on + strand, within IAI46_23625 at 5024.619 kb on + strand, within IAI46_23625 at 5024.620 kb on - strand, within IAI46_23625 at 5024.620 kb on - strand, within IAI46_23625 at 5024.775 kb on - strand at 5024.775 kb on - strand at 5024.775 kb on - strand at 5024.779 kb on + strand at 5024.808 kb on + strand at 5024.842 kb on - strand at 5024.842 kb on - strand at 5024.872 kb on + strand at 5024.899 kb on + strand at 5024.899 kb on + strand at 5024.899 kb on + strand at 5024.900 kb on - strand at 5024.900 kb on - strand at 5024.921 kb on + strand at 5024.933 kb on + strand at 5024.945 kb on - strand at 5024.945 kb on - strand at 5025.133 kb on + strand at 5025.134 kb on - strand at 5025.134 kb on - strand at 5025.262 kb on + strand, within IAI46_23630 at 5025.380 kb on - strand, within IAI46_23630 at 5025.527 kb on - strand at 5025.527 kb on - strand at 5025.561 kb on + strand at 5025.561 kb on + strand at 5025.562 kb on - strand at 5025.562 kb on - strand at 5025.596 kb on + strand at 5025.624 kb on - strand, within IAI46_23635 at 5025.809 kb on + strand, within IAI46_23635 at 5025.860 kb on + strand, within IAI46_23635 at 5025.967 kb on + strand, within IAI46_23635 at 5025.967 kb on + strand, within IAI46_23635 at 5025.968 kb on - strand, within IAI46_23635 at 5025.996 kb on + strand, within IAI46_23635 at 5025.997 kb on - strand, within IAI46_23635 at 5025.997 kb on - strand, within IAI46_23635 at 5026.001 kb on + strand, within IAI46_23635 at 5026.020 kb on + strand, within IAI46_23635 at 5026.020 kb on + strand, within IAI46_23635 at 5026.021 kb on - strand, within IAI46_23635 at 5026.021 kb on - strand, within IAI46_23635 at 5026.058 kb on + strand, within IAI46_23635 at 5026.059 kb on - strand, within IAI46_23635 at 5026.086 kb on + strand, within IAI46_23635 at 5026.086 kb on + strand, within IAI46_23635 at 5026.087 kb on - strand, within IAI46_23635 at 5026.243 kb on + strand, within IAI46_23635 at 5026.259 kb on - strand, within IAI46_23635 at 5026.259 kb on - strand, within IAI46_23635 at 5026.337 kb on + strand, within IAI46_23635 at 5026.360 kb on + strand, within IAI46_23635 at 5026.360 kb on + strand, within IAI46_23635 at 5026.397 kb on + strand, within IAI46_23635 at 5026.397 kb on + strand, within IAI46_23635 at 5026.398 kb on - strand, within IAI46_23635 at 5026.398 kb on - strand, within IAI46_23635 at 5026.398 kb on - strand, within IAI46_23635 at 5026.417 kb on + strand, within IAI46_23635 at 5026.417 kb on + strand, within IAI46_23635 at 5026.421 kb on - strand, within IAI46_23635 at 5026.421 kb on - strand, within IAI46_23635 at 5026.443 kb on - strand, within IAI46_23635 at 5026.459 kb on - strand, within IAI46_23635 at 5026.461 kb on + strand, within IAI46_23635 at 5026.478 kb on + strand, within IAI46_23635 at 5026.479 kb on - strand, within IAI46_23635 at 5026.479 kb on - strand, within IAI46_23635 at 5026.479 kb on - strand, within IAI46_23635
Per-strain Table
Position Strand Gene LocusTag Fraction Cadmium acetate 40 uM, aerobic remove 5,024,254 + -0.3 5,024,255 - +0.2 5,024,255 - +0.1 5,024,255 - -0.9 5,024,255 - -1.6 5,024,260 + -2.5 5,024,261 - -2.7 5,024,261 - +1.1 5,024,318 + IAI46_23625 0.17 -2.2 5,024,318 + IAI46_23625 0.17 -0.2 5,024,318 + IAI46_23625 0.17 +0.7 5,024,318 + IAI46_23625 0.17 -0.0 5,024,318 + IAI46_23625 0.17 -2.5 5,024,425 + IAI46_23625 0.36 -0.5 5,024,426 - IAI46_23625 0.36 -2.1 5,024,426 - IAI46_23625 0.36 +0.9 5,024,426 - IAI46_23625 0.36 +0.3 5,024,426 - IAI46_23625 0.36 -1.3 5,024,437 + IAI46_23625 0.38 -1.3 5,024,462 - IAI46_23625 0.42 -1.4 5,024,542 + IAI46_23625 0.56 -1.0 5,024,563 + IAI46_23625 0.60 +0.5 5,024,563 + IAI46_23625 0.60 +2.1 5,024,590 + IAI46_23625 0.65 -1.4 5,024,590 + IAI46_23625 0.65 +1.0 5,024,591 - IAI46_23625 0.65 -0.1 5,024,591 - IAI46_23625 0.65 +0.0 5,024,591 - IAI46_23625 0.65 +0.4 5,024,591 - IAI46_23625 0.65 +1.3 5,024,601 + IAI46_23625 0.66 +0.9 5,024,601 + IAI46_23625 0.66 +0.0 5,024,605 - IAI46_23625 0.67 -0.4 5,024,619 + IAI46_23625 0.70 +0.2 5,024,619 + IAI46_23625 0.70 -0.9 5,024,620 - IAI46_23625 0.70 -1.4 5,024,620 - IAI46_23625 0.70 -0.0 5,024,775 - +0.2 5,024,775 - -2.1 5,024,775 - +0.1 5,024,779 + +0.4 5,024,808 + +1.3 5,024,842 - -2.3 5,024,842 - -2.9 5,024,872 + -1.5 5,024,899 + +1.3 5,024,899 + -1.3 5,024,899 + +0.5 5,024,900 - -1.3 5,024,900 - +0.7 5,024,921 + +0.8 5,024,933 + +1.2 5,024,945 - -1.3 5,024,945 - -1.1 5,025,133 + -1.0 5,025,134 - +0.6 5,025,134 - -0.8 5,025,262 + IAI46_23630 0.33 +0.0 5,025,380 - IAI46_23630 0.68 -0.9 5,025,527 - -0.9 5,025,527 - +0.1 5,025,561 + +0.2 5,025,561 + +1.0 5,025,562 - -0.1 5,025,562 - +0.3 5,025,596 + +1.7 5,025,624 - IAI46_23635 0.11 +1.2 5,025,809 + IAI46_23635 0.25 +1.1 5,025,860 + IAI46_23635 0.29 -0.6 5,025,967 + IAI46_23635 0.37 +0.2 5,025,967 + IAI46_23635 0.37 +0.9 5,025,968 - IAI46_23635 0.37 +0.2 5,025,996 + IAI46_23635 0.39 +2.4 5,025,997 - IAI46_23635 0.39 -0.4 5,025,997 - IAI46_23635 0.39 -1.2 5,026,001 + IAI46_23635 0.40 -1.8 5,026,020 + IAI46_23635 0.41 -1.7 5,026,020 + IAI46_23635 0.41 -0.9 5,026,021 - IAI46_23635 0.41 -0.6 5,026,021 - IAI46_23635 0.41 -0.2 5,026,058 + IAI46_23635 0.44 +0.8 5,026,059 - IAI46_23635 0.44 -0.6 5,026,086 + IAI46_23635 0.46 +0.2 5,026,086 + IAI46_23635 0.46 +0.4 5,026,087 - IAI46_23635 0.46 +0.8 5,026,243 + IAI46_23635 0.58 +0.7 5,026,259 - IAI46_23635 0.59 +0.1 5,026,259 - IAI46_23635 0.59 -1.3 5,026,337 + IAI46_23635 0.65 -1.1 5,026,360 + IAI46_23635 0.67 +0.8 5,026,360 + IAI46_23635 0.67 +0.5 5,026,397 + IAI46_23635 0.70 +1.9 5,026,397 + IAI46_23635 0.70 +1.1 5,026,398 - IAI46_23635 0.70 -1.3 5,026,398 - IAI46_23635 0.70 -0.7 5,026,398 - IAI46_23635 0.70 -2.3 5,026,417 + IAI46_23635 0.71 +0.3 5,026,417 + IAI46_23635 0.71 +0.1 5,026,421 - IAI46_23635 0.72 -1.4 5,026,421 - IAI46_23635 0.72 -1.9 5,026,443 - IAI46_23635 0.73 +0.5 5,026,459 - IAI46_23635 0.75 +1.9 5,026,461 + IAI46_23635 0.75 +1.2 5,026,478 + IAI46_23635 0.76 -1.3 5,026,479 - IAI46_23635 0.76 -0.4 5,026,479 - IAI46_23635 0.76 +1.6 5,026,479 - IAI46_23635 0.76 +1.3
Or see this region's nucleotide sequence