Strain Fitness in Serratia liquefaciens MT49 around IAI46_22930

Experiment: Cadmium acetate 40 uM, aerobic

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Cadmium acetate 40 uM, aerobic
4,890,168	+				+0.3
4,890,169	-				+0.5
4,890,169	-				+0.2
4,890,181	-				-0.4
4,890,183	-				+1.7
4,890,184	+				+0.4
4,890,184	+				+1.3
4,890,184	+				-1.0
4,890,184	+				-0.0
4,890,185	-				-1.9
4,890,185	-				-0.6
4,890,185	-				-0.2
4,890,191	-				+0.4
4,890,245	-		IAI46_22920	0.16	-2.1
4,890,245	-		IAI46_22920	0.16	+1.4
4,890,263	+		IAI46_22920	0.21	+0.4
4,890,264	-		IAI46_22920	0.21	-0.1
4,890,265	+		IAI46_22920	0.21	-0.3
4,890,265	+		IAI46_22920	0.21	-2.5
4,890,265	+		IAI46_22920	0.21	-0.4
4,890,265	+		IAI46_22920	0.21	+1.7
4,890,265	+		IAI46_22920	0.21	+0.4
4,890,305	+		IAI46_22920	0.33	+0.1
4,890,364	-		IAI46_22920	0.49	-0.7
4,890,417	+		IAI46_22920	0.64	+0.2
4,890,440	+		IAI46_22920	0.71	+0.9
4,890,517	+				-1.0
4,890,517	+				+0.1
4,890,518	-				+0.2
4,890,518	-				+1.3
4,890,537	-				+1.8
4,890,559	+				-1.1
4,890,559	+				+0.4
4,890,560	-				-0.3
4,890,722	+		IAI46_22925	0.42	-1.4
4,890,722	+		IAI46_22925	0.42	+1.5
4,890,723	-		IAI46_22925	0.42	-1.0
4,890,723	-		IAI46_22925	0.42	+0.7
4,890,735	-		IAI46_22925	0.45	-1.1
4,890,735	-		IAI46_22925	0.45	+1.3
4,890,792	+		IAI46_22925	0.59	-0.7
4,890,793	-		IAI46_22925	0.59	+1.0
4,890,793	-		IAI46_22925	0.59	-2.2
4,890,831	+		IAI46_22925	0.68	+0.4
4,890,832	-		IAI46_22925	0.68	-0.7
4,890,841	+		IAI46_22925	0.71	-0.2
4,890,841	+		IAI46_22925	0.71	+0.6
4,890,874	+		IAI46_22925	0.78	+0.2
4,890,874	+		IAI46_22925	0.78	-0.2
4,890,874	+		IAI46_22925	0.78	-0.2
4,890,875	-		IAI46_22925	0.79	+0.7
4,890,884	-		IAI46_22925	0.81	-1.7
4,890,894	+		IAI46_22925	0.83	+0.5
4,890,894	+		IAI46_22925	0.83	-0.5
4,890,895	-		IAI46_22925	0.83	+0.3
4,890,963	+				+1.7
4,890,963	+				+0.9
4,890,963	+				-2.4
4,890,964	-				+1.1
4,890,964	-				+0.6
4,890,985	+				-0.0
4,890,986	-				-2.4
4,890,986	-				-1.6
4,890,986	-				+0.5
4,890,987	+				-0.2
4,890,988	-				+0.3
4,890,988	-				+1.1
4,890,988	-				+1.2
4,891,076	+				-1.5
4,891,076	+				-1.8
4,891,179	-				+0.3
4,891,233	-		IAI46_22930	0.12	+0.4
4,891,233	-		IAI46_22930	0.12	-0.5
4,891,262	+		IAI46_22930	0.14	-1.2
4,891,263	-		IAI46_22930	0.14	+0.3
4,891,263	-		IAI46_22930	0.14	-0.2
4,891,330	-		IAI46_22930	0.20	-1.6
4,891,433	+		IAI46_22930	0.29	-1.0
4,891,433	+		IAI46_22930	0.29	-0.4
4,891,433	+		IAI46_22930	0.29	+1.7
4,891,433	+		IAI46_22930	0.29	-2.8
4,891,438	-		IAI46_22930	0.29	+0.7
4,891,438	-		IAI46_22930	0.29	-2.2
4,891,590	+		IAI46_22930	0.42	-1.5
4,891,591	-		IAI46_22930	0.42	+0.2
4,891,604	+		IAI46_22930	0.43	-1.5
4,891,604	+		IAI46_22930	0.43	-0.3
4,891,604	+		IAI46_22930	0.43	-2.3
4,891,604	+		IAI46_22930	0.43	-1.1
4,891,605	-		IAI46_22930	0.43	-3.0
4,891,605	-		IAI46_22930	0.43	-0.7
4,891,835	+		IAI46_22930	0.62	-2.5
4,891,836	-		IAI46_22930	0.62	+0.7
4,891,841	+		IAI46_22930	0.63	+0.2
4,891,842	-		IAI46_22930	0.63	-0.4
4,891,931	+		IAI46_22930	0.70	-1.1
4,892,087	+		IAI46_22930	0.84	-1.0
4,892,157	+		IAI46_22930	0.89	+2.1
4,892,157	+		IAI46_22930	0.89	+0.0
4,892,174	+				+0.5
4,892,174	+				+0.3
4,892,174	+				+0.6
4,892,174	+				+0.3
4,892,174	+				+0.4
4,892,174	+				+0.1
4,892,174	+				-3.0
4,892,175	-				-0.3
4,892,175	-				+1.0
4,892,177	+				+0.6
4,892,178	-				-0.8
4,892,187	+				+0.2
4,892,188	-				-2.5
4,892,262	-				-2.7
4,892,289	-				-2.0
4,892,302	-				-0.6
4,892,302	-				-1.7
4,892,302	-				-0.2
4,892,310	+				+0.8
4,892,310	+				-2.2
4,892,311	-				+0.8
4,892,311	-				+0.6
4,892,323	-				+0.6
4,892,330	+				+0.8
4,892,330	+				-1.0
4,892,330	+				+1.9
4,892,330	+				-2.0
4,892,330	+				+0.8
4,892,331	-				+0.2
4,892,333	+				-2.7
4,892,333	+				-2.0
4,892,333	+				+1.2
4,892,333	+				-0.7
4,892,334	-				+0.5
4,892,334	-				+0.6
4,892,334	-				-0.9
4,892,334	-				-0.5
4,892,334	-				-2.4
4,892,335	+				-0.6
4,892,335	+				-3.1
4,892,335	+				+0.4
4,892,335	+				+1.1
4,892,336	-				+0.7
4,892,366	-				+0.7
4,892,426	+		IAI46_22935	0.13	-0.2
4,892,512	+		IAI46_22935	0.32	+0.5
4,892,512	+		IAI46_22935	0.32	-1.2
4,892,512	+		IAI46_22935	0.32	-1.1
4,892,512	+		IAI46_22935	0.32	-1.3
4,892,512	+		IAI46_22935	0.32	+0.6
4,892,512	+		IAI46_22935	0.32	-1.1
4,892,513	-		IAI46_22935	0.32	-0.5
4,892,617	-		IAI46_22935	0.54	-0.7
4,892,617	-		IAI46_22935	0.54	+0.3
4,892,617	-		IAI46_22935	0.54	-2.0
4,892,617	-		IAI46_22935	0.54	+0.0
4,892,622	+		IAI46_22935	0.55	+0.4
4,892,622	+		IAI46_22935	0.55	-1.4
4,892,623	-		IAI46_22935	0.55	+1.4
4,892,623	-		IAI46_22935	0.55	+1.2
4,892,623	-		IAI46_22935	0.55	+0.6
4,892,674	+		IAI46_22935	0.66	+0.4
4,892,675	-		IAI46_22935	0.66	+1.1
4,892,708	+		IAI46_22935	0.74	-0.4
4,892,828	-				-0.3
4,892,828	-				-0.5
4,892,828	-				+0.1
4,892,831	+				+3.0
4,892,832	-				+0.7
4,892,832	-				-0.9
4,892,832	-				+0.6
4,892,842	-				-1.1
4,892,867	+				+1.0
4,892,868	-				+0.8
4,892,874	+				-3.3
4,892,874	+				+1.4
4,892,875	-				-0.9
4,893,006	-				+1.0
4,893,006	-				+1.0
4,893,030	+				+0.9
4,893,030	+				+1.2
4,893,030	+				+1.4
4,893,030	+				-2.9
4,893,030	+				+0.8
4,893,030	+				+0.9
4,893,031	-				+3.3
4,893,031	-				-0.9
4,893,031	-				+0.2
4,893,032	+				+0.2
4,893,035	+				+0.9
4,893,035	+				+0.2
4,893,035	+				-0.2
4,893,036	-				-0.7
4,893,122	+				-0.5
4,893,123	-		IAI46_22940	0.10	+0.8
4,893,123	-		IAI46_22940	0.10	+0.3
4,893,123	-		IAI46_22940	0.10	-1.9
4,893,147	+		IAI46_22940	0.13	+0.1
4,893,160	+		IAI46_22940	0.15	-1.2
4,893,161	-		IAI46_22940	0.15	+0.7
4,893,169	+		IAI46_22940	0.16	+0.8
4,893,169	+		IAI46_22940	0.16	-0.4
4,893,169	+		IAI46_22940	0.16	+1.0
4,893,170	-		IAI46_22940	0.16	-0.6
4,893,170	-		IAI46_22940	0.16	+1.1
4,893,170	-		IAI46_22940	0.16	+0.3
4,893,170	-		IAI46_22940	0.16	+0.6
4,893,170	-		IAI46_22940	0.16	+0.6
4,893,170	-		IAI46_22940	0.16	-0.3
4,893,171	+		IAI46_22940	0.16	-1.4
4,893,172	-		IAI46_22940	0.16	+0.2