Strain Fitness in Serratia liquefaciens MT49 around IAI46_15000

Experiment: Cadmium acetate 40 uM, aerobic

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Cadmium acetate 40 uM, aerobic
3,164,220	+		IAI46_14990	0.39	+1.1
3,164,221	-		IAI46_14990	0.40	-0.6
3,164,230	+		IAI46_14990	0.43	-0.6
3,164,231	-		IAI46_14990	0.43	-0.1
3,164,296	-		IAI46_14990	0.64	+0.9
3,164,304	-		IAI46_14990	0.66	-0.3
3,164,304	-		IAI46_14990	0.66	-0.7
3,164,409	+				-2.4
3,164,410	-				+1.5
3,164,480	-				-0.8
3,164,492	-		IAI46_14995	0.10	+0.5
3,164,569	+		IAI46_14995	0.20	-1.2
3,164,579	+		IAI46_14995	0.21	-3.1
3,164,580	-		IAI46_14995	0.21	+0.3
3,164,626	+		IAI46_14995	0.27	+1.1
3,164,696	-		IAI46_14995	0.36	+1.5
3,164,696	-		IAI46_14995	0.36	-0.6
3,164,706	-		IAI46_14995	0.37	-1.2
3,164,712	-		IAI46_14995	0.38	+0.5
3,164,743	+		IAI46_14995	0.41	+2.5
3,164,750	+		IAI46_14995	0.42	+1.6
3,164,774	-		IAI46_14995	0.45	+2.8
3,164,787	+		IAI46_14995	0.47	+0.1
3,164,794	-		IAI46_14995	0.48	-2.7
3,164,818	-		IAI46_14995	0.51	+1.2
3,164,844	+		IAI46_14995	0.54	+0.5
3,164,896	+		IAI46_14995	0.60	-0.0
3,164,914	+		IAI46_14995	0.62	-0.6
3,164,928	-		IAI46_14995	0.64	-0.6
3,164,975	-		IAI46_14995	0.70	+0.4
3,164,975	-		IAI46_14995	0.70	-0.4
3,164,978	-		IAI46_14995	0.70	+0.8
3,165,004	-		IAI46_14995	0.74	+0.9
3,165,004	-		IAI46_14995	0.74	+0.5
3,165,012	+		IAI46_14995	0.75	+2.1
3,165,012	+		IAI46_14995	0.75	+1.0
3,165,013	-		IAI46_14995	0.75	-0.8
3,165,013	-		IAI46_14995	0.75	-0.2
3,165,027	-		IAI46_14995	0.76	-0.5
3,165,027	-		IAI46_14995	0.76	+1.0
3,165,060	+		IAI46_14995	0.80	-0.2
3,165,061	-		IAI46_14995	0.81	+1.5
3,165,061	-		IAI46_14995	0.81	+1.5
3,165,067	+		IAI46_14995	0.81	-1.5
3,165,067	+		IAI46_14995	0.81	+0.4
3,165,068	-		IAI46_14995	0.81	-0.2
3,165,071	+		IAI46_14995	0.82	+1.0
3,165,115	+		IAI46_14995	0.87	+1.0
3,165,115	+		IAI46_14995	0.87	-2.3
3,165,115	+		IAI46_14995	0.87	-0.5
3,165,116	-		IAI46_14995	0.87	-0.5
3,165,116	-		IAI46_14995	0.87	-1.5
3,165,117	+		IAI46_14995	0.88	+0.6
3,165,117	+		IAI46_14995	0.88	+0.3
3,165,117	+		IAI46_14995	0.88	+1.0
3,165,118	-		IAI46_14995	0.88	+0.4
3,165,118	-		IAI46_14995	0.88	+0.0
3,165,118	-		IAI46_14995	0.88	-0.0
3,165,118	-		IAI46_14995	0.88	-1.4
3,165,118	-		IAI46_14995	0.88	+1.0
3,165,118	-		IAI46_14995	0.88	-0.8
3,165,146	-				+0.1
3,165,150	-				-0.6
3,165,179	-				-1.2
3,165,185	+				-1.4
3,165,185	+				-1.1
3,165,186	-				+0.8
3,165,187	+				+2.1
3,165,188	-				+0.2
3,165,353	+				+0.8
3,165,373	+				-1.2
3,165,374	-				+2.0
3,165,374	-				+1.1
3,165,374	-				+0.3
3,165,378	-				-0.2
3,165,395	+				+0.8
3,165,437	+		IAI46_15000	0.12	+0.5
3,165,474	-		IAI46_15000	0.14	+1.9
3,165,604	+		IAI46_15000	0.21	-0.4
3,165,604	+		IAI46_15000	0.21	+0.3
3,165,604	+		IAI46_15000	0.21	-0.2
3,165,665	+		IAI46_15000	0.25	+1.2
3,165,666	-		IAI46_15000	0.25	-2.3
3,165,667	+		IAI46_15000	0.25	+1.3
3,165,668	-		IAI46_15000	0.25	-0.3
3,165,668	-		IAI46_15000	0.25	-1.6
3,165,670	-		IAI46_15000	0.25	-0.0
3,165,682	-		IAI46_15000	0.26	-1.7
3,165,761	+		IAI46_15000	0.30	-0.6
3,165,872	+		IAI46_15000	0.36	-1.0
3,165,887	+		IAI46_15000	0.37	+1.7
3,165,888	-		IAI46_15000	0.37	-2.1
3,165,888	-		IAI46_15000	0.37	+0.5
3,165,888	-		IAI46_15000	0.37	-0.0
3,165,888	-		IAI46_15000	0.37	-2.3
3,165,888	-		IAI46_15000	0.37	+1.2
3,165,888	-		IAI46_15000	0.37	+1.0
3,165,889	+		IAI46_15000	0.37	+1.8
3,165,889	+		IAI46_15000	0.37	-1.9
3,165,889	+		IAI46_15000	0.37	-3.2
3,165,891	+		IAI46_15000	0.37	+0.2
3,165,939	-		IAI46_15000	0.40	-2.9
3,166,203	-		IAI46_15000	0.55	-0.4
3,166,206	+		IAI46_15000	0.55	+0.6
3,166,206	+		IAI46_15000	0.55	-1.0
3,166,236	+		IAI46_15000	0.56	-1.4
3,166,237	-		IAI46_15000	0.57	+0.3
3,166,237	-		IAI46_15000	0.57	-0.7
3,166,239	+		IAI46_15000	0.57	-0.2
3,166,240	-		IAI46_15000	0.57	-0.9
3,166,252	+		IAI46_15000	0.57	+0.7
3,166,327	-		IAI46_15000	0.62	+0.7
3,166,346	+		IAI46_15000	0.63	-0.4
3,166,513	-		IAI46_15000	0.72	+1.1
3,166,547	+		IAI46_15000	0.74	-0.9
3,166,588	-		IAI46_15000	0.76	-0.1
3,166,588	-		IAI46_15000	0.76	-0.7
3,166,588	-		IAI46_15000	0.76	-0.6
3,166,596	-		IAI46_15000	0.77	-0.1
3,166,613	+		IAI46_15000	0.77	+0.2
3,166,614	-		IAI46_15000	0.78	-0.3
3,166,617	+		IAI46_15000	0.78	+1.9
3,166,618	-		IAI46_15000	0.78	-1.5
3,166,629	+		IAI46_15000	0.78	-1.1
3,166,629	+		IAI46_15000	0.78	-1.7
3,166,629	+		IAI46_15000	0.78	-0.3
3,166,630	-		IAI46_15000	0.78	+0.7
3,166,630	-		IAI46_15000	0.78	+0.8
3,166,748	+		IAI46_15000	0.85	-1.6
3,166,749	-		IAI46_15000	0.85	+0.5
3,166,769	+		IAI46_15000	0.86	+0.0
3,166,815	-		IAI46_15000	0.89	+1.5
3,166,824	+		IAI46_15000	0.89	-3.6
3,166,874	+				+1.1
3,167,006	+				+0.5
3,167,006	+				+1.5
3,167,006	+				-0.0
3,167,047	-				-2.1
3,167,055	+				-2.2
3,167,055	+				-0.6
3,167,055	+				-0.9
3,167,107	-				+0.9
3,167,165	+				-0.0
3,167,165	+				+1.3
3,167,177	+				-0.6
3,167,177	+				-0.9
3,167,178	-				-0.2
3,167,196	-				-0.4
3,167,196	-				-0.9
3,167,219	+				+0.6
3,167,219	+				+1.2
3,167,220	-				-2.0
3,167,287	+		IAI46_15005	0.13	-0.7
3,167,292	+		IAI46_15005	0.14	-1.0
3,167,293	-		IAI46_15005	0.15	-0.4
3,167,305	-		IAI46_15005	0.18	+2.3
3,167,497	+		IAI46_15005	0.65	+1.1
3,167,576	+		IAI46_15005	0.84	-1.4
3,167,618	+				+0.9
3,167,651	-				-2.2
3,167,657	+				+0.3
3,167,657	+				-0.1
3,167,657	+				-1.6
3,167,674	-				+1.4
3,167,700	-		IAI46_15010	0.15	+0.0
3,167,738	+		IAI46_15010	0.26	-1.4
3,167,739	-		IAI46_15010	0.26	+0.6
3,167,748	+		IAI46_15010	0.29	-1.4
3,167,769	-		IAI46_15010	0.35	-0.3
3,167,807	+		IAI46_15010	0.46	-0.4
3,167,808	-		IAI46_15010	0.46	+1.0
3,167,866	+		IAI46_15010	0.63	-1.0
3,167,867	-		IAI46_15010	0.64	-1.0
3,167,870	+		IAI46_15010	0.65	+0.7
3,167,871	-		IAI46_15010	0.65	-1.1
3,167,932	-		IAI46_15010	0.83	+2.3
3,167,932	-		IAI46_15010	0.83	+2.1
3,167,932	-		IAI46_15010	0.83	-1.9
3,167,932	-		IAI46_15010	0.83	+1.6