Experiment: Cadmium acetate 40 uM, aerobic
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt IAI46_13705 and IAI46_13710 are separated by 1 nucleotides IAI46_13710 and IAI46_13715 are separated by 265 nucleotides IAI46_13715 and IAI46_13720 overlap by 4 nucleotides IAI46_13720 and IAI46_13725 overlap by 4 nucleotides
IAI46_13705: IAI46_13705 - lysozyme, at 2,922,815 to 2,923,345
_13705
IAI46_13710: IAI46_13710 - hypothetical protein, at 2,923,347 to 2,923,643
_13710
IAI46_13715: IAI46_13715 - antitermination protein, at 2,923,909 to 2,924,742
_13715
IAI46_13720: IAI46_13720 - hypothetical protein, at 2,924,739 to 2,924,933
_13720
IAI46_13725: IAI46_13725 - DUF968 domain-containing protein, at 2,924,930 to 2,925,904
_13725
Position (kb)
2923
2924
2925 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2923.208 kb on - strand, within IAI46_13705 at 2923.224 kb on + strand, within IAI46_13705 at 2923.224 kb on + strand, within IAI46_13705 at 2923.229 kb on + strand, within IAI46_13705 at 2923.232 kb on - strand, within IAI46_13705 at 2923.298 kb on + strand at 2923.416 kb on - strand, within IAI46_13710 at 2923.436 kb on - strand, within IAI46_13710 at 2923.436 kb on - strand, within IAI46_13710 at 2923.504 kb on + strand, within IAI46_13710 at 2923.507 kb on + strand, within IAI46_13710 at 2923.507 kb on + strand, within IAI46_13710 at 2923.546 kb on - strand, within IAI46_13710 at 2923.554 kb on + strand, within IAI46_13710 at 2923.555 kb on - strand, within IAI46_13710 at 2923.555 kb on - strand, within IAI46_13710 at 2923.555 kb on - strand, within IAI46_13710 at 2923.555 kb on - strand, within IAI46_13710 at 2923.559 kb on - strand, within IAI46_13710 at 2923.704 kb on - strand at 2923.983 kb on - strand at 2924.146 kb on - strand, within IAI46_13715 at 2924.158 kb on - strand, within IAI46_13715 at 2924.243 kb on - strand, within IAI46_13715 at 2924.310 kb on + strand, within IAI46_13715 at 2924.365 kb on + strand, within IAI46_13715 at 2924.470 kb on + strand, within IAI46_13715 at 2924.552 kb on - strand, within IAI46_13715 at 2924.596 kb on + strand, within IAI46_13715 at 2924.625 kb on + strand, within IAI46_13715 at 2924.734 kb on + strand at 2925.221 kb on - strand, within IAI46_13725 at 2925.286 kb on + strand, within IAI46_13725 at 2925.529 kb on + strand, within IAI46_13725 at 2925.530 kb on - strand, within IAI46_13725 at 2925.530 kb on - strand, within IAI46_13725 at 2925.565 kb on + strand, within IAI46_13725 at 2925.605 kb on - strand, within IAI46_13725 at 2925.605 kb on - strand, within IAI46_13725 at 2925.628 kb on - strand, within IAI46_13725 at 2925.628 kb on - strand, within IAI46_13725 at 2925.673 kb on + strand, within IAI46_13725
Per-strain Table
Position Strand Gene LocusTag Fraction Cadmium acetate 40 uM, aerobic remove 2,923,208 - IAI46_13705 0.74 +1.2 2,923,224 + IAI46_13705 0.77 -0.6 2,923,224 + IAI46_13705 0.77 -0.9 2,923,229 + IAI46_13705 0.78 -0.9 2,923,232 - IAI46_13705 0.79 +0.9 2,923,298 + -1.4 2,923,416 - IAI46_13710 0.23 -1.9 2,923,436 - IAI46_13710 0.30 -1.4 2,923,436 - IAI46_13710 0.30 -2.3 2,923,504 + IAI46_13710 0.53 +1.1 2,923,507 + IAI46_13710 0.54 +1.8 2,923,507 + IAI46_13710 0.54 -0.7 2,923,546 - IAI46_13710 0.67 +0.6 2,923,554 + IAI46_13710 0.70 +0.1 2,923,555 - IAI46_13710 0.70 -0.1 2,923,555 - IAI46_13710 0.70 +2.5 2,923,555 - IAI46_13710 0.70 +1.9 2,923,555 - IAI46_13710 0.70 +1.9 2,923,559 - IAI46_13710 0.71 +1.5 2,923,704 - +0.1 2,923,983 - +1.8 2,924,146 - IAI46_13715 0.28 -0.5 2,924,158 - IAI46_13715 0.30 -2.4 2,924,243 - IAI46_13715 0.40 +1.6 2,924,310 + IAI46_13715 0.48 -0.9 2,924,365 + IAI46_13715 0.55 -1.4 2,924,470 + IAI46_13715 0.67 +1.1 2,924,552 - IAI46_13715 0.77 -0.7 2,924,596 + IAI46_13715 0.82 -2.0 2,924,625 + IAI46_13715 0.86 +0.7 2,924,734 + -0.6 2,925,221 - IAI46_13725 0.30 +1.9 2,925,286 + IAI46_13725 0.37 -1.1 2,925,529 + IAI46_13725 0.61 +0.3 2,925,530 - IAI46_13725 0.62 +0.4 2,925,530 - IAI46_13725 0.62 +2.7 2,925,565 + IAI46_13725 0.65 +0.2 2,925,605 - IAI46_13725 0.69 -0.4 2,925,605 - IAI46_13725 0.69 +1.0 2,925,628 - IAI46_13725 0.72 -1.8 2,925,628 - IAI46_13725 0.72 -0.7 2,925,673 + IAI46_13725 0.76 +0.6
Or see this region's nucleotide sequence