Experiment: Cadmium acetate 40 uM, aerobic
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt IAI46_12475 and IAI46_12480 are separated by 40 nucleotides IAI46_12480 and IAI46_12485 overlap by 7 nucleotides
IAI46_12475: IAI46_12475 - MFS transporter, at 2,651,165 to 2,652,373
_12475
IAI46_12480: IAI46_12480 - HoxN/HupN/NixA family nickel/cobalt transporter, at 2,652,414 to 2,653,445
_12480
IAI46_12485: IAI46_12485 - carbamoyltransferase HypF, at 2,653,439 to 2,655,751
_12485
Position (kb)
2652
2653
2654 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 2651.429 kb on - strand, within IAI46_12475 at 2651.448 kb on + strand, within IAI46_12475 at 2651.461 kb on + strand, within IAI46_12475 at 2651.489 kb on - strand, within IAI46_12475 at 2651.535 kb on + strand, within IAI46_12475 at 2651.535 kb on + strand, within IAI46_12475 at 2651.536 kb on - strand, within IAI46_12475 at 2651.641 kb on - strand, within IAI46_12475 at 2651.854 kb on + strand, within IAI46_12475 at 2651.886 kb on + strand, within IAI46_12475 at 2651.886 kb on + strand, within IAI46_12475 at 2652.019 kb on - strand, within IAI46_12475 at 2652.062 kb on + strand, within IAI46_12475 at 2652.139 kb on + strand, within IAI46_12475 at 2652.140 kb on - strand, within IAI46_12475 at 2652.559 kb on - strand, within IAI46_12480 at 2652.652 kb on + strand, within IAI46_12480 at 2652.653 kb on - strand, within IAI46_12480 at 2652.671 kb on + strand, within IAI46_12480 at 2652.672 kb on - strand, within IAI46_12480 at 2652.791 kb on + strand, within IAI46_12480 at 2652.792 kb on - strand, within IAI46_12480 at 2652.792 kb on - strand, within IAI46_12480 at 2652.855 kb on + strand, within IAI46_12480 at 2652.872 kb on - strand, within IAI46_12480 at 2652.872 kb on - strand, within IAI46_12480 at 2652.887 kb on + strand, within IAI46_12480 at 2652.888 kb on - strand, within IAI46_12480 at 2652.957 kb on + strand, within IAI46_12480 at 2653.053 kb on + strand, within IAI46_12480 at 2653.448 kb on + strand at 2653.448 kb on + strand at 2653.448 kb on + strand at 2653.449 kb on - strand at 2653.449 kb on - strand at 2653.605 kb on - strand at 2653.654 kb on + strand at 2654.391 kb on + strand, within IAI46_12485 at 2654.437 kb on + strand, within IAI46_12485 at 2654.440 kb on - strand, within IAI46_12485
Per-strain Table
Position Strand Gene LocusTag Fraction Cadmium acetate 40 uM, aerobic remove 2,651,429 - IAI46_12475 0.22 -0.1 2,651,448 + IAI46_12475 0.23 -0.2 2,651,461 + IAI46_12475 0.24 +0.6 2,651,489 - IAI46_12475 0.27 -0.6 2,651,535 + IAI46_12475 0.31 -1.8 2,651,535 + IAI46_12475 0.31 +0.6 2,651,536 - IAI46_12475 0.31 +0.3 2,651,641 - IAI46_12475 0.39 -1.5 2,651,854 + IAI46_12475 0.57 +1.8 2,651,886 + IAI46_12475 0.60 +1.3 2,651,886 + IAI46_12475 0.60 -2.8 2,652,019 - IAI46_12475 0.71 -1.6 2,652,062 + IAI46_12475 0.74 -1.9 2,652,139 + IAI46_12475 0.81 +2.2 2,652,140 - IAI46_12475 0.81 -1.9 2,652,559 - IAI46_12480 0.14 -0.8 2,652,652 + IAI46_12480 0.23 -0.8 2,652,653 - IAI46_12480 0.23 +1.0 2,652,671 + IAI46_12480 0.25 +0.1 2,652,672 - IAI46_12480 0.25 -2.4 2,652,791 + IAI46_12480 0.37 -2.1 2,652,792 - IAI46_12480 0.37 -0.5 2,652,792 - IAI46_12480 0.37 -3.0 2,652,855 + IAI46_12480 0.43 +1.8 2,652,872 - IAI46_12480 0.44 +0.4 2,652,872 - IAI46_12480 0.44 +0.0 2,652,887 + IAI46_12480 0.46 +1.3 2,652,888 - IAI46_12480 0.46 +0.6 2,652,957 + IAI46_12480 0.53 +1.5 2,653,053 + IAI46_12480 0.62 -1.2 2,653,448 + -0.5 2,653,448 + -2.0 2,653,448 + +1.0 2,653,449 - +2.1 2,653,449 - +1.4 2,653,605 - -0.6 2,653,654 + +0.6 2,654,391 + IAI46_12485 0.41 -2.5 2,654,437 + IAI46_12485 0.43 -0.2 2,654,440 - IAI46_12485 0.43 -1.8
Or see this region's nucleotide sequence