Experiment: Cadmium acetate 40 uM, aerobic
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt IAI46_11530 and IAI46_11535 are separated by 66 nucleotides IAI46_11535 and IAI46_11540 are separated by 37 nucleotides
IAI46_11530: IAI46_11530 - oxidoreductase, at 2,434,814 to 2,435,854
_11530
IAI46_11535: IAI46_11535 - bile acid:sodium symporter, at 2,435,921 to 2,436,925
_11535
IAI46_11540: IAI46_11540 - adenosine deaminase, at 2,436,963 to 2,437,961
_11540
Position (kb)
2435
2436
2437 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 2435.026 kb on + strand, within IAI46_11530 at 2435.027 kb on - strand, within IAI46_11530 at 2435.027 kb on - strand, within IAI46_11530 at 2435.457 kb on + strand, within IAI46_11530 at 2435.457 kb on + strand, within IAI46_11530 at 2435.494 kb on + strand, within IAI46_11530 at 2435.494 kb on + strand, within IAI46_11530 at 2435.494 kb on + strand, within IAI46_11530 at 2435.528 kb on - strand, within IAI46_11530 at 2435.717 kb on + strand, within IAI46_11530 at 2435.717 kb on + strand, within IAI46_11530 at 2435.866 kb on + strand at 2435.866 kb on + strand at 2436.221 kb on + strand, within IAI46_11535 at 2436.400 kb on + strand, within IAI46_11535 at 2436.421 kb on - strand, within IAI46_11535 at 2436.554 kb on + strand, within IAI46_11535 at 2436.555 kb on - strand, within IAI46_11535 at 2436.556 kb on + strand, within IAI46_11535 at 2436.674 kb on + strand, within IAI46_11535 at 2436.700 kb on + strand, within IAI46_11535 at 2436.701 kb on - strand, within IAI46_11535 at 2437.117 kb on - strand, within IAI46_11540 at 2437.117 kb on - strand, within IAI46_11540 at 2437.117 kb on - strand, within IAI46_11540 at 2437.472 kb on + strand, within IAI46_11540 at 2437.535 kb on + strand, within IAI46_11540 at 2437.654 kb on + strand, within IAI46_11540 at 2437.654 kb on + strand, within IAI46_11540 at 2437.655 kb on - strand, within IAI46_11540 at 2437.655 kb on - strand, within IAI46_11540 at 2437.681 kb on + strand, within IAI46_11540 at 2437.869 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Cadmium acetate 40 uM, aerobic remove 2,435,026 + IAI46_11530 0.20 -1.3 2,435,027 - IAI46_11530 0.20 +0.7 2,435,027 - IAI46_11530 0.20 +0.8 2,435,457 + IAI46_11530 0.62 +2.5 2,435,457 + IAI46_11530 0.62 +0.6 2,435,494 + IAI46_11530 0.65 -2.3 2,435,494 + IAI46_11530 0.65 -0.1 2,435,494 + IAI46_11530 0.65 +0.9 2,435,528 - IAI46_11530 0.69 -1.9 2,435,717 + IAI46_11530 0.87 +0.7 2,435,717 + IAI46_11530 0.87 +1.6 2,435,866 + -0.2 2,435,866 + -0.2 2,436,221 + IAI46_11535 0.30 -1.2 2,436,400 + IAI46_11535 0.48 +1.8 2,436,421 - IAI46_11535 0.50 -1.8 2,436,554 + IAI46_11535 0.63 +0.5 2,436,555 - IAI46_11535 0.63 -0.2 2,436,556 + IAI46_11535 0.63 +0.9 2,436,674 + IAI46_11535 0.75 -2.8 2,436,700 + IAI46_11535 0.78 -0.2 2,436,701 - IAI46_11535 0.78 -0.8 2,437,117 - IAI46_11540 0.15 +1.1 2,437,117 - IAI46_11540 0.15 -0.5 2,437,117 - IAI46_11540 0.15 +1.1 2,437,472 + IAI46_11540 0.51 -0.5 2,437,535 + IAI46_11540 0.57 -2.1 2,437,654 + IAI46_11540 0.69 -1.9 2,437,654 + IAI46_11540 0.69 +1.2 2,437,655 - IAI46_11540 0.69 +0.8 2,437,655 - IAI46_11540 0.69 -0.1 2,437,681 + IAI46_11540 0.72 -1.3 2,437,869 - +2.3
Or see this region's nucleotide sequence