Experiment: Cadmium acetate 40 uM, aerobic
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt IAI46_09665 and IAI46_09670 are separated by 199 nucleotides IAI46_09670 and IAI46_09675 are separated by 251 nucleotides IAI46_09675 and IAI46_09680 are separated by 454 nucleotides
IAI46_09665: IAI46_09665 - multidrug efflux MFS transporter MdtG, at 2,049,839 to 2,051,077
_09665
IAI46_09670: IAI46_09670 - hypothetical protein, at 2,051,277 to 2,051,561
_09670
IAI46_09675: IAI46_09675 - LpxL/LpxP family Kdo(2)-lipid IV(A) lauroyl/palmitoleoyl acyltransferasee, at 2,051,813 to 2,052,733
_09675
IAI46_09680: IAI46_09680 - NADH:flavin oxidoreductase/NADH oxidase, at 2,053,188 to 2,054,285
_09680
Position (kb)
2051
2052
2053 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3 at 2050.961 kb on + strand at 2050.962 kb on - strand at 2050.966 kb on - strand at 2051.169 kb on + strand at 2051.170 kb on - strand at 2051.170 kb on - strand at 2051.171 kb on + strand at 2051.278 kb on + strand at 2051.278 kb on + strand at 2051.278 kb on + strand at 2051.278 kb on + strand at 2051.325 kb on + strand, within IAI46_09670 at 2051.325 kb on + strand, within IAI46_09670 at 2051.334 kb on + strand, within IAI46_09670 at 2051.342 kb on - strand, within IAI46_09670 at 2051.401 kb on - strand, within IAI46_09670 at 2051.457 kb on - strand, within IAI46_09670 at 2051.539 kb on + strand at 2051.539 kb on + strand at 2051.540 kb on - strand at 2051.557 kb on + strand at 2051.558 kb on - strand at 2051.558 kb on - strand at 2051.562 kb on - strand at 2051.562 kb on - strand at 2051.591 kb on + strand at 2051.633 kb on - strand at 2051.672 kb on - strand at 2051.678 kb on - strand at 2051.678 kb on - strand at 2051.683 kb on + strand at 2051.683 kb on + strand at 2051.687 kb on + strand at 2051.687 kb on + strand at 2051.694 kb on + strand at 2051.712 kb on - strand at 2051.725 kb on + strand at 2051.783 kb on - strand at 2051.787 kb on + strand at 2052.784 kb on - strand at 2052.833 kb on + strand at 2052.843 kb on + strand at 2052.886 kb on - strand at 2052.979 kb on + strand at 2053.007 kb on + strand at 2053.007 kb on + strand at 2053.008 kb on - strand at 2053.008 kb on - strand at 2053.008 kb on - strand at 2053.024 kb on + strand at 2053.127 kb on + strand at 2053.128 kb on - strand at 2053.128 kb on - strand at 2053.215 kb on + strand at 2053.303 kb on + strand, within IAI46_09680 at 2053.303 kb on + strand, within IAI46_09680 at 2053.304 kb on - strand, within IAI46_09680 at 2053.304 kb on - strand, within IAI46_09680 at 2053.441 kb on - strand, within IAI46_09680 at 2053.595 kb on + strand, within IAI46_09680 at 2053.645 kb on + strand, within IAI46_09680 at 2053.700 kb on + strand, within IAI46_09680
Per-strain Table
Position Strand Gene LocusTag Fraction Cadmium acetate 40 uM, aerobic remove 2,050,961 + +1.0 2,050,962 - -0.8 2,050,966 - -1.5 2,051,169 + +1.5 2,051,170 - -0.3 2,051,170 - +0.9 2,051,171 + +2.6 2,051,278 + -0.6 2,051,278 + -1.3 2,051,278 + -1.5 2,051,278 + +0.8 2,051,325 + IAI46_09670 0.17 +2.1 2,051,325 + IAI46_09670 0.17 -0.3 2,051,334 + IAI46_09670 0.20 -1.3 2,051,342 - IAI46_09670 0.23 -0.8 2,051,401 - IAI46_09670 0.44 +1.4 2,051,457 - IAI46_09670 0.63 +0.2 2,051,539 + -0.7 2,051,539 + +1.5 2,051,540 - +0.9 2,051,557 + +0.8 2,051,558 - +1.0 2,051,558 - +0.4 2,051,562 - -0.6 2,051,562 - -1.8 2,051,591 + +1.4 2,051,633 - +1.3 2,051,672 - -2.5 2,051,678 - +0.9 2,051,678 - -0.7 2,051,683 + +0.4 2,051,683 + +3.1 2,051,687 + -1.2 2,051,687 + +0.3 2,051,694 + +0.9 2,051,712 - +0.8 2,051,725 + -0.8 2,051,783 - +1.3 2,051,787 + +1.0 2,052,784 - -2.1 2,052,833 + +1.2 2,052,843 + +3.0 2,052,886 - -1.6 2,052,979 + -0.4 2,053,007 + -3.5 2,053,007 + -0.4 2,053,008 - +1.7 2,053,008 - +1.2 2,053,008 - -0.3 2,053,024 + -3.3 2,053,127 + +2.0 2,053,128 - +0.2 2,053,128 - +2.1 2,053,215 + +1.6 2,053,303 + IAI46_09680 0.10 -0.3 2,053,303 + IAI46_09680 0.10 -0.6 2,053,304 - IAI46_09680 0.11 -1.8 2,053,304 - IAI46_09680 0.11 +2.0 2,053,441 - IAI46_09680 0.23 -0.4 2,053,595 + IAI46_09680 0.37 +0.0 2,053,645 + IAI46_09680 0.42 +0.2 2,053,700 + IAI46_09680 0.47 +1.4
Or see this region's nucleotide sequence