Experiment: Cadmium acetate 40 uM, aerobic
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt IAI46_03470 and IAI46_03475 are separated by 14 nucleotides IAI46_03475 and IAI46_03480 are separated by 26 nucleotides IAI46_03480 and IAI46_03485 are separated by 90 nucleotides
IAI46_03470: IAI46_03470 - UDP-3-O-acyl-N-acetylglucosamine deacetylase, at 752,739 to 753,656
_03470
IAI46_03475: IAI46_03475 - DUF721 domain-containing protein, at 753,671 to 754,195
_03475
IAI46_03480: IAI46_03480 - secA regulator SecM, at 754,222 to 754,755
_03480
IAI46_03485: IAI46_03485 - preprotein translocase subunit SecA, at 754,846 to 757,557
_03485
Position (kb) 754
755 Strain fitness (log2 ratio) -2
-1
0
1 at 753.655 kb on - strand at 753.672 kb on + strand at 753.672 kb on + strand at 753.673 kb on - strand at 753.673 kb on - strand at 753.676 kb on + strand at 753.676 kb on + strand at 753.677 kb on - strand at 753.729 kb on - strand, within IAI46_03475 at 753.729 kb on - strand, within IAI46_03475 at 753.732 kb on - strand, within IAI46_03475 at 753.732 kb on - strand, within IAI46_03475 at 753.774 kb on - strand, within IAI46_03475 at 753.774 kb on - strand, within IAI46_03475 at 753.774 kb on - strand, within IAI46_03475 at 753.808 kb on + strand, within IAI46_03475 at 753.808 kb on + strand, within IAI46_03475 at 753.809 kb on - strand, within IAI46_03475 at 754.235 kb on + strand at 754.235 kb on + strand at 754.264 kb on + strand at 754.264 kb on + strand at 754.748 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Cadmium acetate 40 uM, aerobic remove 753,655 - +0.3 753,672 + -0.6 753,672 + -1.5 753,673 - +1.3 753,673 - +0.6 753,676 + +0.3 753,676 + +0.7 753,677 - -0.6 753,729 - IAI46_03475 0.11 +0.0 753,729 - IAI46_03475 0.11 -2.1 753,732 - IAI46_03475 0.12 +0.5 753,732 - IAI46_03475 0.12 +0.9 753,774 - IAI46_03475 0.20 +0.9 753,774 - IAI46_03475 0.20 -1.0 753,774 - IAI46_03475 0.20 +0.9 753,808 + IAI46_03475 0.26 +1.0 753,808 + IAI46_03475 0.26 -1.8 753,809 - IAI46_03475 0.26 +0.5 754,235 + -0.2 754,235 + +0.7 754,264 + -0.6 754,264 + +0.4 754,748 + -0.4
Or see this region's nucleotide sequence