Experiment: Cadmium acetate 40 uM, aerobic
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt IAI46_00305 and IAI46_00310 overlap by 50 nucleotides IAI46_00310 and IAI46_00315 are separated by 5 nucleotides IAI46_00315 and IAI46_00320 are separated by 126 nucleotides
IAI46_00305: IAI46_00305 - nucleotidyltransferase domain-containing protein, at 71,958 to 72,578
_00305
IAI46_00310: IAI46_00310 - DNA-binding protein, at 72,529 to 72,969
_00310
IAI46_00315: IAI46_00315 - LysR family transcriptional regulator, at 72,975 to 73,829
_00315
IAI46_00320: IAI46_00320 - cyanate transporter, at 73,956 to 75,155
_00320
Position (kb) 72
73
74 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 72.023 kb on - strand, within IAI46_00305 at 72.023 kb on - strand, within IAI46_00305 at 72.087 kb on - strand, within IAI46_00305 at 72.134 kb on - strand, within IAI46_00305 at 72.160 kb on - strand, within IAI46_00305 at 72.251 kb on - strand, within IAI46_00305 at 72.312 kb on - strand, within IAI46_00305 at 72.335 kb on - strand, within IAI46_00305 at 72.335 kb on - strand, within IAI46_00305 at 72.335 kb on - strand, within IAI46_00305 at 72.335 kb on - strand, within IAI46_00305 at 72.388 kb on - strand, within IAI46_00305 at 72.433 kb on - strand, within IAI46_00305 at 72.480 kb on - strand, within IAI46_00305 at 72.489 kb on - strand, within IAI46_00305 at 72.489 kb on - strand, within IAI46_00305 at 72.492 kb on - strand, within IAI46_00305 at 72.492 kb on - strand, within IAI46_00305 at 72.498 kb on - strand, within IAI46_00305 at 72.498 kb on - strand, within IAI46_00305 at 72.509 kb on - strand, within IAI46_00305 at 72.509 kb on - strand, within IAI46_00305 at 72.537 kb on - strand at 72.548 kb on + strand at 72.548 kb on + strand at 72.548 kb on + strand at 72.549 kb on - strand at 72.569 kb on + strand at 72.569 kb on + strand at 72.569 kb on + strand at 72.569 kb on + strand at 72.570 kb on - strand at 72.570 kb on - strand at 72.570 kb on - strand at 72.570 kb on - strand at 72.648 kb on + strand, within IAI46_00310 at 72.649 kb on - strand, within IAI46_00310 at 72.649 kb on - strand, within IAI46_00310 at 72.676 kb on + strand, within IAI46_00310 at 72.676 kb on + strand, within IAI46_00310 at 72.676 kb on + strand, within IAI46_00310 at 72.676 kb on + strand, within IAI46_00310 at 72.677 kb on - strand, within IAI46_00310 at 72.678 kb on + strand, within IAI46_00310 at 72.679 kb on - strand, within IAI46_00310 at 72.741 kb on + strand, within IAI46_00310 at 72.741 kb on + strand, within IAI46_00310 at 72.741 kb on + strand, within IAI46_00310 at 72.742 kb on - strand, within IAI46_00310 at 72.742 kb on - strand, within IAI46_00310 at 72.742 kb on - strand, within IAI46_00310 at 72.761 kb on + strand, within IAI46_00310 at 72.762 kb on - strand, within IAI46_00310 at 72.853 kb on + strand, within IAI46_00310 at 72.853 kb on + strand, within IAI46_00310 at 72.854 kb on - strand, within IAI46_00310 at 72.854 kb on - strand, within IAI46_00310 at 72.854 kb on - strand, within IAI46_00310 at 72.857 kb on + strand, within IAI46_00310 at 72.857 kb on + strand, within IAI46_00310 at 72.857 kb on + strand, within IAI46_00310 at 72.857 kb on + strand, within IAI46_00310 at 72.858 kb on - strand, within IAI46_00310 at 72.866 kb on + strand, within IAI46_00310 at 72.866 kb on + strand, within IAI46_00310 at 72.867 kb on - strand, within IAI46_00310 at 72.886 kb on + strand, within IAI46_00310 at 72.886 kb on + strand, within IAI46_00310 at 72.886 kb on + strand, within IAI46_00310 at 72.886 kb on + strand, within IAI46_00310 at 72.887 kb on - strand, within IAI46_00310 at 72.887 kb on - strand, within IAI46_00310 at 72.887 kb on - strand, within IAI46_00310 at 72.887 kb on - strand, within IAI46_00310 at 72.927 kb on + strand at 72.967 kb on + strand at 73.045 kb on + strand at 73.046 kb on - strand at 73.048 kb on + strand at 73.048 kb on + strand at 73.048 kb on + strand at 73.049 kb on - strand at 73.199 kb on - strand, within IAI46_00315 at 73.322 kb on + strand, within IAI46_00315 at 73.370 kb on + strand, within IAI46_00315 at 73.415 kb on - strand, within IAI46_00315 at 73.415 kb on - strand, within IAI46_00315 at 73.418 kb on - strand, within IAI46_00315 at 73.503 kb on - strand, within IAI46_00315 at 73.560 kb on - strand, within IAI46_00315 at 73.612 kb on + strand, within IAI46_00315 at 73.612 kb on + strand, within IAI46_00315 at 73.612 kb on + strand, within IAI46_00315 at 73.612 kb on + strand, within IAI46_00315 at 73.613 kb on - strand, within IAI46_00315 at 73.613 kb on - strand, within IAI46_00315 at 73.613 kb on - strand, within IAI46_00315 at 73.732 kb on - strand, within IAI46_00315 at 73.763 kb on + strand at 73.763 kb on + strand at 73.764 kb on - strand at 73.764 kb on - strand at 73.798 kb on - strand at 73.884 kb on + strand at 73.884 kb on + strand at 73.885 kb on - strand at 73.885 kb on - strand at 73.890 kb on - strand at 73.890 kb on - strand at 73.907 kb on + strand at 73.908 kb on - strand at 73.950 kb on + strand at 73.950 kb on + strand at 73.951 kb on - strand at 73.951 kb on - strand at 73.961 kb on - strand at 73.961 kb on - strand at 73.961 kb on - strand at 73.970 kb on + strand at 73.970 kb on + strand at 73.970 kb on + strand at 73.971 kb on - strand at 73.971 kb on - strand at 73.971 kb on - strand at 73.987 kb on + strand at 73.988 kb on - strand at 74.060 kb on + strand at 74.342 kb on + strand, within IAI46_00320 at 74.343 kb on - strand, within IAI46_00320 at 74.343 kb on - strand, within IAI46_00320 at 74.343 kb on - strand, within IAI46_00320 at 74.343 kb on - strand, within IAI46_00320 at 74.343 kb on - strand, within IAI46_00320 at 74.343 kb on - strand, within IAI46_00320 at 74.433 kb on - strand, within IAI46_00320 at 74.433 kb on - strand, within IAI46_00320 at 74.467 kb on - strand, within IAI46_00320 at 74.468 kb on + strand, within IAI46_00320 at 74.468 kb on + strand, within IAI46_00320 at 74.581 kb on + strand, within IAI46_00320 at 74.616 kb on + strand, within IAI46_00320 at 74.630 kb on + strand, within IAI46_00320 at 74.670 kb on + strand, within IAI46_00320 at 74.673 kb on + strand, within IAI46_00320 at 74.673 kb on + strand, within IAI46_00320 at 74.673 kb on + strand, within IAI46_00320 at 74.673 kb on + strand, within IAI46_00320 at 74.674 kb on - strand, within IAI46_00320 at 74.674 kb on - strand, within IAI46_00320 at 74.674 kb on - strand, within IAI46_00320 at 74.795 kb on - strand, within IAI46_00320
Per-strain Table
Position Strand Gene LocusTag Fraction Cadmium acetate 40 uM, aerobic remove 72,023 - IAI46_00305 0.10 +0.1 72,023 - IAI46_00305 0.10 -0.2 72,087 - IAI46_00305 0.21 -3.2 72,134 - IAI46_00305 0.28 -0.5 72,160 - IAI46_00305 0.33 -0.6 72,251 - IAI46_00305 0.47 +0.2 72,312 - IAI46_00305 0.57 +2.2 72,335 - IAI46_00305 0.61 -0.4 72,335 - IAI46_00305 0.61 +1.9 72,335 - IAI46_00305 0.61 +0.9 72,335 - IAI46_00305 0.61 -0.2 72,388 - IAI46_00305 0.69 -0.0 72,433 - IAI46_00305 0.76 +0.5 72,480 - IAI46_00305 0.84 +0.4 72,489 - IAI46_00305 0.86 -0.2 72,489 - IAI46_00305 0.86 +0.3 72,492 - IAI46_00305 0.86 +1.8 72,492 - IAI46_00305 0.86 -1.7 72,498 - IAI46_00305 0.87 -0.8 72,498 - IAI46_00305 0.87 -0.3 72,509 - IAI46_00305 0.89 +0.5 72,509 - IAI46_00305 0.89 +0.7 72,537 - +0.3 72,548 + +0.3 72,548 + +0.9 72,548 + +1.8 72,549 - +1.6 72,569 + -1.1 72,569 + +2.4 72,569 + -0.5 72,569 + +0.2 72,570 - -1.5 72,570 - -1.1 72,570 - +0.6 72,570 - +0.2 72,648 + IAI46_00310 0.27 -2.1 72,649 - IAI46_00310 0.27 +0.4 72,649 - IAI46_00310 0.27 +0.3 72,676 + IAI46_00310 0.33 +0.8 72,676 + IAI46_00310 0.33 -0.6 72,676 + IAI46_00310 0.33 -1.4 72,676 + IAI46_00310 0.33 +1.2 72,677 - IAI46_00310 0.34 +1.4 72,678 + IAI46_00310 0.34 -2.1 72,679 - IAI46_00310 0.34 +0.6 72,741 + IAI46_00310 0.48 +0.1 72,741 + IAI46_00310 0.48 +0.7 72,741 + IAI46_00310 0.48 +0.1 72,742 - IAI46_00310 0.48 +2.1 72,742 - IAI46_00310 0.48 -0.1 72,742 - IAI46_00310 0.48 +0.2 72,761 + IAI46_00310 0.53 +0.0 72,762 - IAI46_00310 0.53 -0.8 72,853 + IAI46_00310 0.73 -0.2 72,853 + IAI46_00310 0.73 -1.9 72,854 - IAI46_00310 0.74 +0.7 72,854 - IAI46_00310 0.74 -0.9 72,854 - IAI46_00310 0.74 +0.1 72,857 + IAI46_00310 0.74 -1.4 72,857 + IAI46_00310 0.74 +0.7 72,857 + IAI46_00310 0.74 -0.5 72,857 + IAI46_00310 0.74 +1.0 72,858 - IAI46_00310 0.75 +0.0 72,866 + IAI46_00310 0.76 -0.5 72,866 + IAI46_00310 0.76 -0.5 72,867 - IAI46_00310 0.77 +1.4 72,886 + IAI46_00310 0.81 -0.5 72,886 + IAI46_00310 0.81 -1.9 72,886 + IAI46_00310 0.81 +0.7 72,886 + IAI46_00310 0.81 +0.8 72,887 - IAI46_00310 0.81 +2.7 72,887 - IAI46_00310 0.81 -1.2 72,887 - IAI46_00310 0.81 +1.2 72,887 - IAI46_00310 0.81 +0.8 72,927 + +0.5 72,967 + +0.8 73,045 + -1.1 73,046 - -1.0 73,048 + +1.0 73,048 + +1.0 73,048 + -0.1 73,049 - +1.9 73,199 - IAI46_00315 0.26 -0.6 73,322 + IAI46_00315 0.41 -1.9 73,370 + IAI46_00315 0.46 +0.2 73,415 - IAI46_00315 0.51 +1.1 73,415 - IAI46_00315 0.51 +2.1 73,418 - IAI46_00315 0.52 -0.2 73,503 - IAI46_00315 0.62 -0.5 73,560 - IAI46_00315 0.68 +0.4 73,612 + IAI46_00315 0.75 +0.7 73,612 + IAI46_00315 0.75 -1.6 73,612 + IAI46_00315 0.75 +0.5 73,612 + IAI46_00315 0.75 -1.6 73,613 - IAI46_00315 0.75 -0.6 73,613 - IAI46_00315 0.75 -1.3 73,613 - IAI46_00315 0.75 +1.2 73,732 - IAI46_00315 0.89 -0.5 73,763 + -0.6 73,763 + -0.6 73,764 - +0.0 73,764 - +0.7 73,798 - -1.2 73,884 + -1.1 73,884 + +1.1 73,885 - -0.5 73,885 - -1.9 73,890 - -0.8 73,890 - +1.1 73,907 + -1.8 73,908 - -0.3 73,950 + -3.0 73,950 + -0.3 73,951 - -1.8 73,951 - -1.2 73,961 - +1.2 73,961 - -0.7 73,961 - +0.7 73,970 + -2.2 73,970 + -1.9 73,970 + +0.7 73,971 - -3.1 73,971 - -0.6 73,971 - +0.1 73,987 + -0.6 73,988 - +1.1 74,060 + -2.8 74,342 + IAI46_00320 0.32 -1.2 74,343 - IAI46_00320 0.32 +1.2 74,343 - IAI46_00320 0.32 -0.4 74,343 - IAI46_00320 0.32 +0.1 74,343 - IAI46_00320 0.32 -1.0 74,343 - IAI46_00320 0.32 +0.2 74,343 - IAI46_00320 0.32 -0.2 74,433 - IAI46_00320 0.40 +0.9 74,433 - IAI46_00320 0.40 +1.4 74,467 - IAI46_00320 0.43 -1.1 74,468 + IAI46_00320 0.43 -1.2 74,468 + IAI46_00320 0.43 +0.6 74,581 + IAI46_00320 0.52 -0.7 74,616 + IAI46_00320 0.55 -1.7 74,630 + IAI46_00320 0.56 -0.3 74,670 + IAI46_00320 0.59 -1.6 74,673 + IAI46_00320 0.60 -0.8 74,673 + IAI46_00320 0.60 -1.9 74,673 + IAI46_00320 0.60 +0.0 74,673 + IAI46_00320 0.60 +0.5 74,674 - IAI46_00320 0.60 +1.0 74,674 - IAI46_00320 0.60 -0.2 74,674 - IAI46_00320 0.60 -0.9 74,795 - IAI46_00320 0.70 +0.5
Or see this region's nucleotide sequence