Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_4148

Experiment: marine broth

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	marine broth
4,963,286	+				-0.2
4,963,459	+				-0.6
4,963,459	+				-1.1
4,963,459	+				-1.4
4,963,459	+				-1.0
4,963,459	+				+0.5
4,963,492	-				+1.4
4,963,492	-				+1.9
4,963,492	-				+0.8
4,963,517	-				+0.5
4,963,517	-				+0.2
4,963,517	-				+0.0
4,963,517	-				-0.0
4,963,517	-				+1.1
4,963,539	-				+0.1
4,963,539	-				+1.4
4,963,580	+				-2.9
4,963,580	+				-0.9
4,963,580	+				-2.3
4,963,580	+				+0.4
4,963,581	-				+0.4
4,963,581	-				-2.3
4,963,581	-				-0.8
4,963,581	-				+0.1
4,963,581	-				+0.4
4,963,581	-				+0.4
4,963,583	+				-0.1
4,963,584	-				-1.9
4,963,584	-				+0.7
4,963,622	+				-2.5
4,963,626	+				+0.5
4,963,714	+		Echvi_4147	0.15	+0.6
4,963,749	+		Echvi_4147	0.20	-0.4
4,963,749	+		Echvi_4147	0.20	+0.0
4,963,777	-		Echvi_4147	0.25	-0.9
4,963,843	+		Echvi_4147	0.35	-0.5
4,963,845	+		Echvi_4147	0.35	+1.2
4,963,865	-		Echvi_4147	0.38	+0.6
4,963,931	+		Echvi_4147	0.49	+0.8
4,963,932	-		Echvi_4147	0.49	-1.4
4,963,932	-		Echvi_4147	0.49	-0.4
4,963,996	-		Echvi_4147	0.59	+1.1
4,964,019	+		Echvi_4147	0.63	-1.3
4,964,089	+		Echvi_4147	0.74	-0.2
4,964,122	-		Echvi_4147	0.79	+1.6
4,964,130	+		Echvi_4147	0.80	-1.1
4,964,130	+		Echvi_4147	0.80	-0.1
4,964,130	+		Echvi_4147	0.80	-2.5
4,964,131	-		Echvi_4147	0.80	-2.0
4,964,135	-		Echvi_4147	0.81	-0.6
4,964,139	+		Echvi_4147	0.81	+1.7
4,964,139	+		Echvi_4147	0.81	-2.4
4,964,139	+		Echvi_4147	0.81	-1.4
4,964,140	-		Echvi_4147	0.82	-0.2
4,964,140	-		Echvi_4147	0.82	-2.9
4,964,150	-		Echvi_4147	0.83	+1.2
4,964,183	+		Echvi_4147	0.88	-1.6
4,964,192	-		Echvi_4147	0.90	-2.3
4,964,258	-				+0.1
4,964,277	+				-0.3
4,964,278	-				-1.2
4,964,344	+				+0.5
4,964,344	+				+0.6
4,964,344	+				+1.5
4,964,344	+				+1.4
4,964,345	-				+0.4
4,964,345	-				+0.9
4,964,349	+		Echvi_4148	0.10	+0.5
4,964,352	+		Echvi_4148	0.11	-0.4
4,964,353	-		Echvi_4148	0.11	+0.7
4,964,353	-		Echvi_4148	0.11	-1.0
4,964,357	+		Echvi_4148	0.11	-0.0
4,964,357	+		Echvi_4148	0.11	+0.5
4,964,358	-		Echvi_4148	0.11	+0.5
4,964,358	-		Echvi_4148	0.11	+1.1
4,964,358	-		Echvi_4148	0.11	+0.8
4,964,358	-		Echvi_4148	0.11	+0.5
4,964,360	+		Echvi_4148	0.12	+0.8
4,964,372	-		Echvi_4148	0.13	+1.4
4,964,421	+		Echvi_4148	0.18	-1.8
4,964,458	-		Echvi_4148	0.22	-1.0
4,964,478	-		Echvi_4148	0.25	-2.3
4,964,478	-		Echvi_4148	0.25	-0.4
4,964,486	+		Echvi_4148	0.25	-0.1
4,964,487	-		Echvi_4148	0.26	+1.0
4,964,524	-		Echvi_4148	0.30	-3.4
4,964,543	+		Echvi_4148	0.32	+0.1
4,964,543	+		Echvi_4148	0.32	+0.9
4,964,543	+		Echvi_4148	0.32	+0.8
4,964,544	-		Echvi_4148	0.32	-1.1
4,964,589	+		Echvi_4148	0.37	-2.9
4,964,589	+		Echvi_4148	0.37	+1.6
4,964,590	-		Echvi_4148	0.37	+1.0
4,964,590	-		Echvi_4148	0.37	-0.1
4,964,590	-		Echvi_4148	0.37	-0.1
4,964,608	-		Echvi_4148	0.39	-1.8
4,964,646	+		Echvi_4148	0.43	-0.8
4,964,667	+		Echvi_4148	0.46	+0.1
4,964,667	+		Echvi_4148	0.46	-1.3
4,964,720	+		Echvi_4148	0.51	+0.7
4,964,731	-		Echvi_4148	0.53	+0.5
4,964,793	+		Echvi_4148	0.59	-1.3
4,964,793	+		Echvi_4148	0.59	-0.3
4,964,793	+		Echvi_4148	0.59	-2.2
4,964,794	-		Echvi_4148	0.60	+0.4
4,964,795	+		Echvi_4148	0.60	+0.7
4,964,796	-		Echvi_4148	0.60	+1.5
4,964,796	-		Echvi_4148	0.60	-1.8
4,964,804	-		Echvi_4148	0.61	+1.3
4,964,804	-		Echvi_4148	0.61	+0.6
4,964,822	+		Echvi_4148	0.63	+1.2
4,964,822	+		Echvi_4148	0.63	-0.3
4,964,823	-		Echvi_4148	0.63	+0.2
4,964,823	-		Echvi_4148	0.63	-0.0
4,964,840	+		Echvi_4148	0.65	+0.3
4,964,841	-		Echvi_4148	0.65	-0.2
4,964,841	-		Echvi_4148	0.65	+0.2
4,964,841	-		Echvi_4148	0.65	+0.4
4,964,844	+		Echvi_4148	0.65	+2.1
4,964,955	+		Echvi_4148	0.77	-2.5
4,964,955	+		Echvi_4148	0.77	-0.2
4,964,955	+		Echvi_4148	0.77	-0.2
4,964,956	-		Echvi_4148	0.78	-0.0
4,964,975	+		Echvi_4148	0.80	+0.6
4,964,976	-		Echvi_4148	0.80	+0.2
4,964,979	+		Echvi_4148	0.80	+0.3
4,964,979	+		Echvi_4148	0.80	-2.0
4,964,980	-		Echvi_4148	0.80	+0.3
4,964,980	-		Echvi_4148	0.80	+1.4
4,965,009	+		Echvi_4148	0.83	+1.0
4,965,010	-		Echvi_4148	0.83	+0.8
4,965,069	+				-0.1
4,965,070	-				-0.9
4,965,078	+				+0.2
4,965,083	+				+1.2
4,965,083	+				-1.4
4,965,083	+				+2.3
4,965,167	-				+0.2
4,965,212	+		Echvi_4149	0.15	-2.9
4,965,212	+		Echvi_4149	0.15	-1.0
4,965,213	-		Echvi_4149	0.15	-1.4
4,965,213	-		Echvi_4149	0.15	-0.3
4,965,213	-		Echvi_4149	0.15	+2.2
4,965,233	-		Echvi_4149	0.21	-0.8
4,965,233	-		Echvi_4149	0.21	-1.1
4,965,240	+		Echvi_4149	0.23	+0.2
4,965,241	-		Echvi_4149	0.23	+0.0
4,965,245	+		Echvi_4149	0.24	-0.6
4,965,275	+		Echvi_4149	0.32	+0.1
4,965,276	-		Echvi_4149	0.32	-0.3
4,965,320	+		Echvi_4149	0.44	+0.3
4,965,320	+		Echvi_4149	0.44	-0.6
4,965,320	+		Echvi_4149	0.44	-0.9
4,965,321	-		Echvi_4149	0.44	+0.1
4,965,329	-		Echvi_4149	0.46	+0.5
4,965,332	+		Echvi_4149	0.47	+0.0
4,965,332	+		Echvi_4149	0.47	+1.2
4,965,333	-		Echvi_4149	0.47	-3.0
4,965,333	-		Echvi_4149	0.47	-0.1
4,965,359	+		Echvi_4149	0.54	+0.2
4,965,359	+		Echvi_4149	0.54	+1.1
4,965,359	+		Echvi_4149	0.54	-0.6
4,965,359	+		Echvi_4149	0.54	+2.0
4,965,360	-		Echvi_4149	0.55	-0.2
4,965,360	-		Echvi_4149	0.55	+1.1
4,965,360	-		Echvi_4149	0.55	+0.3
4,965,360	-		Echvi_4149	0.55	-0.4
4,965,360	-		Echvi_4149	0.55	+1.2
4,965,439	+		Echvi_4149	0.76	-0.2
4,965,439	+		Echvi_4149	0.76	+0.9
4,965,439	+		Echvi_4149	0.76	+0.1
4,965,439	+		Echvi_4149	0.76	-0.3
4,965,440	-		Echvi_4149	0.76	+1.5
4,965,440	-		Echvi_4149	0.76	+0.5
4,965,444	-		Echvi_4149	0.77	+0.8
4,965,444	-		Echvi_4149	0.77	+0.7
4,965,524	-				-0.4
4,965,529	+				+0.4
4,965,572	+				+1.2
4,965,592	-				-1.1
4,965,628	+				+0.0
4,965,628	+				+0.7
4,965,629	-				+2.8
4,965,629	-				-0.8
4,965,633	-				+0.4
4,965,633	-				-1.2
4,965,635	+				+0.4
4,965,637	+				-1.1
4,965,637	+				+0.7
4,965,638	-				+0.2
4,965,638	-				+0.3
4,965,638	-				+0.3
4,965,638	-				+0.6
4,965,638	-				-0.2
4,965,638	-				-2.1
4,965,642	-				+1.2
4,965,642	-				-2.4
4,965,676	-				+1.0
4,965,699	-				+0.0
4,965,720	-				-0.5
4,965,807	+				-0.6
4,965,808	-				-0.0
4,965,809	+				-2.4
4,965,837	-				-0.6
4,965,838	+				-1.3
4,965,839	-				+1.0
4,965,839	-				-2.6
4,965,839	-				+2.7
4,965,851	-				-0.4
4,965,851	-				+0.6
4,965,854	+				+0.7
4,965,893	-		Echvi_4150	0.18	-0.8
4,965,917	+		Echvi_4150	0.26	-0.9
4,965,919	+		Echvi_4150	0.27	-0.1
4,965,932	+		Echvi_4150	0.31	+0.3
4,965,932	+		Echvi_4150	0.31	-0.1
4,965,932	+		Echvi_4150	0.31	-1.5
4,965,933	-		Echvi_4150	0.32	-0.6
4,965,933	-		Echvi_4150	0.32	+1.3
4,965,933	-		Echvi_4150	0.32	+1.4
4,965,933	-		Echvi_4150	0.32	+1.8
4,965,963	+		Echvi_4150	0.42	+2.5
4,965,963	+		Echvi_4150	0.42	-0.1
4,966,049	+		Echvi_4150	0.71	+0.9
4,966,056	+		Echvi_4150	0.73	-1.7
4,966,057	-		Echvi_4150	0.73	-0.6
4,966,057	-		Echvi_4150	0.73	+1.0
4,966,124	-				-0.7
4,966,125	+				-0.0
4,966,126	-				+0.2
4,966,126	-				+1.2
4,966,126	-				+0.5
4,966,129	+				+0.1