Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_3157

Experiment: marine broth

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	marine broth
3,762,437	-		Echvi_3156	0.35	+0.9
3,762,437	-		Echvi_3156	0.35	-0.2
3,762,437	-		Echvi_3156	0.35	+0.1
3,762,437	-		Echvi_3156	0.35	+0.8
3,762,437	-		Echvi_3156	0.35	-0.6
3,762,437	-		Echvi_3156	0.35	+1.2
3,762,467	-		Echvi_3156	0.37	+0.3
3,762,467	-		Echvi_3156	0.37	-1.2
3,762,467	-		Echvi_3156	0.37	-1.2
3,762,469	+		Echvi_3156	0.38	+0.2
3,762,469	+		Echvi_3156	0.38	-0.6
3,762,510	+		Echvi_3156	0.41	-1.1
3,762,514	-		Echvi_3156	0.41	+0.3
3,762,514	-		Echvi_3156	0.41	+0.6
3,762,516	+		Echvi_3156	0.41	-1.5
3,762,516	+		Echvi_3156	0.41	-0.9
3,762,517	-		Echvi_3156	0.41	-1.6
3,762,517	-		Echvi_3156	0.41	-0.3
3,762,517	-		Echvi_3156	0.41	+0.2
3,762,573	-		Echvi_3156	0.45	-2.2
3,762,573	-		Echvi_3156	0.45	+0.2
3,762,620	-		Echvi_3156	0.49	-0.1
3,762,628	-		Echvi_3156	0.49	-1.5
3,762,693	-		Echvi_3156	0.54	-1.0
3,762,712	-		Echvi_3156	0.55	-0.9
3,762,723	+		Echvi_3156	0.56	-1.5
3,762,724	-		Echvi_3156	0.56	-0.7
3,762,735	+		Echvi_3156	0.57	+0.9
3,762,735	+		Echvi_3156	0.57	-1.4
3,762,744	-		Echvi_3156	0.58	-2.9
3,762,768	+		Echvi_3156	0.60	-0.1
3,762,768	+		Echvi_3156	0.60	+0.8
3,762,769	-		Echvi_3156	0.60	+1.4
3,762,775	+		Echvi_3156	0.60	-0.9
3,762,856	-		Echvi_3156	0.66	+0.9
3,762,856	-		Echvi_3156	0.66	-1.1
3,763,016	-		Echvi_3156	0.78	-0.1
3,763,039	+		Echvi_3156	0.80	-0.3
3,763,040	-		Echvi_3156	0.80	+0.2
3,763,040	-		Echvi_3156	0.80	+1.5
3,763,186	-				+0.7
3,763,186	-				-0.7
3,763,196	-				+0.1
3,763,202	-				+0.4
3,763,245	-				+0.6
3,763,355	+				+0.5
3,763,355	+				+1.6
3,763,435	-				-0.6
3,763,467	-		Echvi_3157	0.13	-0.4
3,763,477	+		Echvi_3157	0.14	+0.4
3,763,478	-		Echvi_3157	0.14	+0.1
3,763,478	-		Echvi_3157	0.14	-0.5
3,763,478	-		Echvi_3157	0.14	+0.2
3,763,486	+		Echvi_3157	0.15	+0.1
3,763,487	-		Echvi_3157	0.15	-0.4
3,763,487	-		Echvi_3157	0.15	-0.3
3,763,516	-		Echvi_3157	0.18	+1.4
3,763,551	-		Echvi_3157	0.21	+0.9
3,763,591	-		Echvi_3157	0.25	+1.6
3,763,591	-		Echvi_3157	0.25	-0.7
3,763,591	-		Echvi_3157	0.25	+0.6
3,763,627	+		Echvi_3157	0.29	-1.4
3,763,628	-		Echvi_3157	0.29	-2.0
3,763,628	-		Echvi_3157	0.29	+0.7
3,763,656	-		Echvi_3157	0.32	+0.4
3,763,755	+		Echvi_3157	0.41	+0.1
3,763,758	+		Echvi_3157	0.42	-2.0
3,763,758	+		Echvi_3157	0.42	+0.1
3,763,759	-		Echvi_3157	0.42	+0.9
3,763,759	-		Echvi_3157	0.42	-0.5
3,763,761	+		Echvi_3157	0.42	-0.5
3,763,761	+		Echvi_3157	0.42	+0.1
3,763,762	-		Echvi_3157	0.42	-0.6
3,763,762	-		Echvi_3157	0.42	+1.3
3,763,762	-		Echvi_3157	0.42	+0.6
3,763,791	-		Echvi_3157	0.45	-2.0
3,763,824	+		Echvi_3157	0.48	+0.6
3,763,833	-		Echvi_3157	0.49	-1.4
3,763,842	+		Echvi_3157	0.50	-1.0
3,763,843	-		Echvi_3157	0.50	-1.9
3,763,866	-		Echvi_3157	0.52	+0.6
3,763,866	-		Echvi_3157	0.52	-1.4
3,763,872	+		Echvi_3157	0.53	+0.4
3,763,875	+		Echvi_3157	0.53	-1.9
3,763,876	-		Echvi_3157	0.53	-0.6
3,763,881	+		Echvi_3157	0.54	+0.6
3,763,996	-		Echvi_3157	0.65	-1.2
3,764,046	-		Echvi_3157	0.70	+0.1
3,764,074	-		Echvi_3157	0.73	-0.2
3,764,089	+		Echvi_3157	0.74	-1.0
3,764,138	-		Echvi_3157	0.79	+0.6
3,764,160	+		Echvi_3157	0.81	-1.3
3,764,160	+		Echvi_3157	0.81	-1.8
3,764,161	-		Echvi_3157	0.81	+0.1
3,764,161	-		Echvi_3157	0.81	+0.0
3,764,161	-		Echvi_3157	0.81	+0.2
3,764,164	+		Echvi_3157	0.82	+0.5
3,764,164	+		Echvi_3157	0.82	-0.8
3,764,164	+		Echvi_3157	0.82	-1.1
3,764,164	+		Echvi_3157	0.82	-0.1
3,764,165	-		Echvi_3157	0.82	-0.4
3,764,165	-		Echvi_3157	0.82	-1.9
3,764,188	-		Echvi_3157	0.84	+0.6
3,764,188	-		Echvi_3157	0.84	+0.2
3,764,224	+		Echvi_3157	0.88	+0.7
3,764,224	+		Echvi_3157	0.88	+0.4
3,764,225	-		Echvi_3157	0.88	-1.7
3,764,225	-		Echvi_3157	0.88	+0.8
3,764,225	-		Echvi_3157	0.88	-0.4
3,764,225	-		Echvi_3157	0.88	+0.9
3,764,229	-		Echvi_3157	0.88	-0.2
3,764,244	+		Echvi_3157	0.90	+0.5
3,764,244	+		Echvi_3157	0.90	-1.4
3,764,245	-		Echvi_3157	0.90	-2.3
3,764,250	+				-0.6
3,764,265	-				+1.5
3,764,265	-				+0.3
3,764,272	-				+1.4
3,764,344	+				+0.6
3,764,344	+				+0.1
3,764,351	+				-2.0
3,764,355	-				-0.0
3,764,379	-				-0.2
3,764,380	+				-1.1
3,764,380	+				-1.0
3,764,381	-				-1.0
3,764,381	-				+2.5
3,764,413	-				+1.2
3,764,413	-				+1.3
3,764,441	+				+0.1
3,764,471	+		Echvi_3158	0.10	-2.5
3,764,474	+		Echvi_3158	0.11	+0.8
3,764,476	+		Echvi_3158	0.11	-2.5
3,764,476	+		Echvi_3158	0.11	-0.6
3,764,477	-		Echvi_3158	0.11	+0.2
3,764,477	-		Echvi_3158	0.11	-0.1
3,764,477	-		Echvi_3158	0.11	-2.3
3,764,477	-		Echvi_3158	0.11	-1.1
3,764,477	-		Echvi_3158	0.11	+0.7
3,764,480	+		Echvi_3158	0.11	-0.2
3,764,480	+		Echvi_3158	0.11	-1.3
3,764,481	-		Echvi_3158	0.11	-0.9
3,764,538	+		Echvi_3158	0.17	-0.1
3,764,538	+		Echvi_3158	0.17	+0.7
3,764,572	+		Echvi_3158	0.20	-0.3
3,764,572	+		Echvi_3158	0.20	-2.7
3,764,572	+		Echvi_3158	0.20	+2.4
3,764,573	-		Echvi_3158	0.20	-0.5
3,764,573	-		Echvi_3158	0.20	+1.8
3,764,573	-		Echvi_3158	0.20	+1.5
3,764,573	-		Echvi_3158	0.20	+0.2
3,764,576	+		Echvi_3158	0.20	+2.6
3,764,576	+		Echvi_3158	0.20	-1.0
3,764,616	+		Echvi_3158	0.24	-0.6
3,764,663	-		Echvi_3158	0.28	+1.6
3,764,687	+		Echvi_3158	0.31	-2.9
3,764,687	+		Echvi_3158	0.31	+1.4
3,764,745	-		Echvi_3158	0.36	-0.5
3,764,774	+		Echvi_3158	0.39	-0.1
3,764,775	-		Echvi_3158	0.39	-0.5
3,764,795	+		Echvi_3158	0.41	-0.6
3,764,798	+		Echvi_3158	0.41	-0.5
3,764,914	+		Echvi_3158	0.52	-2.6
3,764,915	-		Echvi_3158	0.52	+0.4
3,764,915	-		Echvi_3158	0.52	+0.0
3,764,970	+		Echvi_3158	0.57	+0.9
3,764,971	-		Echvi_3158	0.57	-0.5
3,765,030	-		Echvi_3158	0.63	-0.8
3,765,059	+		Echvi_3158	0.66	+0.4
3,765,060	-		Echvi_3158	0.66	-1.9
3,765,078	-		Echvi_3158	0.68	+1.0
3,765,089	-		Echvi_3158	0.69	-1.8
3,765,132	+		Echvi_3158	0.73	-1.3
3,765,133	-		Echvi_3158	0.73	-1.9
3,765,147	+		Echvi_3158	0.74	+2.1
3,765,175	+		Echvi_3158	0.77	+1.4
3,765,176	-		Echvi_3158	0.77	-0.8
3,765,207	+		Echvi_3158	0.80	-1.8
3,765,208	-		Echvi_3158	0.80	-0.5
3,765,208	-		Echvi_3158	0.80	+1.7
3,765,208	-		Echvi_3158	0.80	-0.7
3,765,228	-		Echvi_3158	0.82	-0.7
3,765,228	-		Echvi_3158	0.82	-0.7
3,765,322	+				-1.9