Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_1682

Experiment: marine broth

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	marine broth
1,970,158	+		Echvi_1681	0.71	-0.1
1,970,159	-		Echvi_1681	0.71	+0.7
1,970,159	-		Echvi_1681	0.71	-0.3
1,970,266	+		Echvi_1681	0.76	-1.4
1,970,266	+		Echvi_1681	0.76	+0.2
1,970,267	-		Echvi_1681	0.76	+0.4
1,970,267	-		Echvi_1681	0.76	-1.0
1,970,428	+		Echvi_1681	0.83	+0.4
1,970,497	+		Echvi_1681	0.86	-1.6
1,970,500	+		Echvi_1681	0.86	+0.3
1,970,500	+		Echvi_1681	0.86	+0.9
1,970,501	-		Echvi_1681	0.87	-0.0
1,970,510	+		Echvi_1681	0.87	+0.3
1,970,540	-		Echvi_1681	0.88	+1.5
1,970,673	-				-3.0
1,970,715	+				-1.0
1,970,767	+				+0.9
1,970,767	+				-1.7
1,970,767	+				+0.5
1,970,767	+				-0.3
1,970,768	-				+1.4
1,970,768	-				-0.4
1,970,768	-				-0.2
1,970,779	+				+2.7
1,970,779	+				-1.5
1,970,780	-				-1.1
1,970,780	-				-1.3
1,970,782	-				-0.3
1,970,782	-				+0.3
1,970,782	-				-1.3
1,970,811	-				+0.8
1,970,845	-				-0.1
1,970,845	-				-1.0
1,970,923	+				-2.6
1,970,968	-				-0.5
1,970,997	+				-1.3
1,970,997	+				+1.4
1,970,998	-				+0.3
1,971,038	+				+1.4
1,971,081	-				+0.3
1,971,106	-				+0.1
1,971,120	+				+0.1
1,971,120	+				+0.1
1,971,147	+				+1.0
1,971,147	+				+1.2
1,971,212	+				-0.1
1,971,212	+				+1.1
1,971,212	+				+0.3
1,971,218	-				-1.0
1,971,343	+				-0.9
1,971,357	-				+0.1
1,971,409	+				-0.6
1,971,409	+				+0.1
1,971,416	-		Echvi_1682	0.10	-0.0
1,971,416	-		Echvi_1682	0.10	-0.8
1,971,416	-		Echvi_1682	0.10	-0.5
1,971,416	-		Echvi_1682	0.10	-2.0
1,971,448	-		Echvi_1682	0.11	+0.7
1,971,522	+		Echvi_1682	0.14	+0.2
1,971,523	-		Echvi_1682	0.14	-1.5
1,971,523	-		Echvi_1682	0.14	-0.3
1,971,523	-		Echvi_1682	0.14	+1.1
1,971,550	-		Echvi_1682	0.15	-1.4
1,971,554	-		Echvi_1682	0.15	-0.4
1,971,680	+		Echvi_1682	0.19	+0.9
1,971,947	+		Echvi_1682	0.29	-2.5
1,971,949	+		Echvi_1682	0.29	-1.6
1,971,950	-		Echvi_1682	0.29	+2.2
1,971,950	-		Echvi_1682	0.29	+0.1
1,971,969	-		Echvi_1682	0.30	-1.1
1,972,020	+		Echvi_1682	0.31	+0.2
1,972,050	-		Echvi_1682	0.32	-0.2
1,972,050	-		Echvi_1682	0.32	-2.0
1,972,051	+		Echvi_1682	0.32	+0.9
1,972,051	+		Echvi_1682	0.32	-1.3
1,972,051	+		Echvi_1682	0.32	-0.4
1,972,051	+		Echvi_1682	0.32	+2.5
1,972,051	+		Echvi_1682	0.32	-0.3
1,972,085	+		Echvi_1682	0.34	+0.8
1,972,095	+		Echvi_1682	0.34	+0.1
1,972,095	+		Echvi_1682	0.34	+1.1
1,972,095	+		Echvi_1682	0.34	+1.2
1,972,096	-		Echvi_1682	0.34	-1.3
1,972,096	-		Echvi_1682	0.34	+1.7
1,972,096	-		Echvi_1682	0.34	+1.2
1,972,096	-		Echvi_1682	0.34	-0.3
1,972,096	-		Echvi_1682	0.34	+0.6
1,972,141	+		Echvi_1682	0.36	-0.2
1,972,199	-		Echvi_1682	0.38	+0.3
1,972,246	+		Echvi_1682	0.39	-1.9
1,972,246	+		Echvi_1682	0.39	+0.2
1,972,246	+		Echvi_1682	0.39	+0.2
1,972,247	-		Echvi_1682	0.39	+0.5
1,972,247	-		Echvi_1682	0.39	-0.1
1,972,247	-		Echvi_1682	0.39	+0.6
1,972,282	+		Echvi_1682	0.41	-3.2
1,972,334	+		Echvi_1682	0.42	+0.1
1,972,335	-		Echvi_1682	0.42	+1.6
1,972,335	-		Echvi_1682	0.42	+0.6
1,972,386	+		Echvi_1682	0.44	+2.8
1,972,490	-		Echvi_1682	0.48	-2.3
1,972,522	+		Echvi_1682	0.49	+1.7
1,972,523	-		Echvi_1682	0.49	+0.3
1,972,523	-		Echvi_1682	0.49	-1.8
1,972,523	-		Echvi_1682	0.49	+0.1
1,972,523	-		Echvi_1682	0.49	-0.7
1,972,524	+		Echvi_1682	0.49	-2.2
1,972,524	+		Echvi_1682	0.49	+0.4
1,972,525	-		Echvi_1682	0.49	+0.5
1,972,525	-		Echvi_1682	0.49	+0.3
1,972,547	+		Echvi_1682	0.50	+1.4
1,972,547	+		Echvi_1682	0.50	-1.3
1,972,559	-		Echvi_1682	0.50	-0.3
1,972,585	+		Echvi_1682	0.51	-1.1
1,972,592	-		Echvi_1682	0.51	-2.3
1,972,643	+		Echvi_1682	0.53	+1.9
1,972,644	-		Echvi_1682	0.53	+0.9
1,972,849	+		Echvi_1682	0.60	-0.3
1,972,850	-		Echvi_1682	0.60	-1.2
1,973,039	-		Echvi_1682	0.67	-0.6
1,973,072	+		Echvi_1682	0.68	+0.1
1,973,072	+		Echvi_1682	0.68	+0.3
1,973,072	+		Echvi_1682	0.68	+0.6
1,973,073	-		Echvi_1682	0.68	+0.6
1,973,292	+		Echvi_1682	0.76	+2.0
1,973,292	+		Echvi_1682	0.76	-0.7
1,973,292	+		Echvi_1682	0.76	-0.9
1,973,293	-		Echvi_1682	0.76	+0.3
1,973,312	+		Echvi_1682	0.77	-1.0
1,973,312	+		Echvi_1682	0.77	+0.5
1,973,312	+		Echvi_1682	0.77	-0.8
1,973,313	-		Echvi_1682	0.77	+0.6
1,973,428	+		Echvi_1682	0.81	+1.3
1,973,428	+		Echvi_1682	0.81	-0.6
1,973,494	-		Echvi_1682	0.83	-1.7
1,973,494	-		Echvi_1682	0.83	+0.4
1,973,494	-		Echvi_1682	0.83	-0.3
1,973,494	-		Echvi_1682	0.83	+0.2
1,973,497	+		Echvi_1682	0.83	-0.6
1,973,497	+		Echvi_1682	0.83	-0.1
1,973,497	+		Echvi_1682	0.83	+0.4
1,973,497	+		Echvi_1682	0.83	-0.2
1,973,498	-		Echvi_1682	0.83	-2.7
1,973,498	-		Echvi_1682	0.83	-1.4
1,973,499	+		Echvi_1682	0.83	-1.5
1,973,500	-		Echvi_1682	0.83	+1.9
1,973,500	-		Echvi_1682	0.83	-0.7
1,973,500	-		Echvi_1682	0.83	+1.0
1,973,503	+		Echvi_1682	0.83	-0.4
1,973,503	+		Echvi_1682	0.83	+1.2
1,973,503	+		Echvi_1682	0.83	+0.2
1,973,504	-		Echvi_1682	0.83	+0.3
1,973,504	-		Echvi_1682	0.83	-0.6
1,973,505	+		Echvi_1682	0.83	-0.3
1,973,558	+		Echvi_1682	0.85	+1.0
1,973,649	+		Echvi_1682	0.89	-0.3
1,973,650	-		Echvi_1682	0.89	+0.7
1,973,650	-		Echvi_1682	0.89	+0.8
1,973,650	-		Echvi_1682	0.89	-0.7
1,973,650	-		Echvi_1682	0.89	-0.4
1,973,650	-		Echvi_1682	0.89	+0.0
1,973,681	-		Echvi_1682	0.90	+0.1
1,973,742	+				-1.5
1,973,742	+				-0.1
1,973,743	-				+0.0
1,973,750	-				+0.9
1,973,786	+				-1.5
1,973,786	+				+0.9
1,973,786	+				-0.9
1,973,786	+				-1.3
1,973,787	-				+1.4
1,973,787	-				-1.2
1,973,787	-				+0.8
1,973,787	-				-0.2
1,973,787	-				+0.4
1,973,787	-				+0.7
1,973,787	-				+0.1
1,973,787	-				-1.3
1,973,787	-				-0.4
1,973,788	+				-0.4
1,973,788	+				+0.4
1,973,789	-				-0.3
1,973,789	-				+0.4
1,973,789	-				-0.8
1,973,790	+				-0.5
1,973,821	+				-1.2
1,973,927	+				-0.2
1,973,953	+				-2.1
1,974,086	-				-0.4
1,974,139	+				+1.0
1,974,139	+				+0.5
1,974,161	-				-0.2
1,974,179	+				+1.2
1,974,179	+				-1.7
1,974,291	-		Echvi_1683	0.22	-0.5
1,974,375	+		Echvi_1683	0.32	+0.8
1,974,376	-				-0.3
1,974,442	+		Echvi_1683	0.39	-1.8
1,974,443	-		Echvi_1683	0.39	-2.4
1,974,447	-		Echvi_1683	0.40	+1.3
1,974,447	-		Echvi_1683	0.40	-0.8
1,974,447	-		Echvi_1683	0.40	+0.2
1,974,481	+		Echvi_1683	0.44	-2.2
1,974,481	+		Echvi_1683	0.44	-1.2
1,974,482	-		Echvi_1683	0.44	-0.7
1,974,482	-		Echvi_1683	0.44	-0.7
1,974,501	+		Echvi_1683	0.46	+0.7
1,974,586	+		Echvi_1683	0.56	-0.1
1,974,587	-		Echvi_1683	0.56	+1.3
1,974,608	-		Echvi_1683	0.58	+0.2
1,974,733	+		Echvi_1683	0.73	+0.6
1,974,734	-		Echvi_1683	0.73	+2.8
1,974,734	-		Echvi_1683	0.73	+2.6
1,974,805	+		Echvi_1683	0.81	+1.0
1,974,805	+		Echvi_1683	0.81	-0.3
1,974,805	+		Echvi_1683	0.81	+0.1
1,974,805	+		Echvi_1683	0.81	-0.1
1,974,806	-		Echvi_1683	0.81	+0.5
1,974,806	-		Echvi_1683	0.81	+0.1
1,974,806	-		Echvi_1683	0.81	-0.9
1,974,806	-		Echvi_1683	0.81	+1.1
1,974,806	-		Echvi_1683	0.81	+1.0
1,974,914	+				-1.9
1,974,914	+				+2.6
1,974,919	+				+0.4
1,974,919	+				+0.3
1,974,920	-				-0.8