Experiment: m.b. Cobalt chloride 0.05 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_21365 and CA264_21370 are separated by 330 nucleotides CA264_21370 and CA264_21375 are separated by 94 nucleotides CA264_21375 and CA264_21380 are separated by 11 nucleotides
CA264_21365: CA264_21365 - hypothetical protein, at 137,495 to 137,875
_21365
CA264_21370: CA264_21370 - hypothetical protein, at 138,206 to 139,042
_21370
CA264_21375: CA264_21375 - hypothetical protein, at 139,137 to 139,643
_21375
CA264_21380: CA264_21380 - hypothetical protein, at 139,655 to 140,869
_21380
Position (kb) 138
139
140 Strain fitness (log2 ratio) -2
-1
0
1
2
3 at 137.207 kb on - strand at 137.222 kb on + strand at 137.223 kb on - strand at 137.264 kb on + strand at 137.264 kb on + strand at 137.279 kb on + strand at 137.302 kb on + strand at 137.303 kb on - strand at 137.306 kb on + strand at 137.307 kb on - strand at 137.307 kb on - strand at 137.311 kb on + strand at 137.311 kb on + strand at 137.314 kb on + strand at 137.333 kb on - strand at 137.333 kb on - strand at 137.371 kb on + strand at 137.372 kb on - strand at 137.381 kb on + strand at 137.382 kb on - strand at 137.382 kb on - strand at 137.411 kb on + strand at 137.419 kb on + strand at 137.428 kb on + strand at 137.428 kb on + strand at 137.429 kb on - strand at 137.431 kb on - strand at 137.431 kb on - strand at 137.432 kb on + strand at 137.432 kb on + strand at 137.433 kb on - strand at 137.433 kb on - strand at 137.453 kb on + strand at 137.453 kb on + strand at 137.457 kb on + strand at 137.458 kb on - strand at 137.478 kb on + strand at 137.478 kb on + strand at 137.479 kb on - strand at 137.479 kb on - strand at 137.480 kb on + strand at 137.481 kb on - strand at 137.491 kb on + strand at 137.491 kb on + strand at 137.491 kb on + strand at 137.492 kb on - strand at 137.563 kb on - strand, within CA264_21365 at 137.563 kb on - strand, within CA264_21365 at 137.581 kb on - strand, within CA264_21365 at 137.594 kb on + strand, within CA264_21365 at 137.594 kb on + strand, within CA264_21365 at 137.595 kb on - strand, within CA264_21365 at 137.698 kb on + strand, within CA264_21365 at 137.741 kb on + strand, within CA264_21365 at 137.744 kb on - strand, within CA264_21365 at 137.744 kb on - strand, within CA264_21365 at 137.801 kb on - strand, within CA264_21365 at 137.801 kb on - strand, within CA264_21365 at 137.801 kb on - strand, within CA264_21365 at 137.866 kb on + strand at 137.866 kb on + strand at 137.867 kb on - strand at 137.886 kb on + strand at 137.887 kb on - strand at 137.887 kb on - strand at 137.901 kb on + strand at 137.902 kb on - strand at 137.908 kb on - strand at 137.915 kb on - strand at 137.932 kb on - strand at 137.932 kb on - strand at 137.958 kb on + strand at 137.983 kb on - strand at 137.983 kb on - strand at 138.055 kb on + strand at 138.055 kb on + strand at 138.057 kb on + strand at 138.132 kb on + strand at 138.133 kb on - strand at 138.200 kb on + strand at 138.201 kb on - strand at 138.201 kb on - strand at 138.201 kb on - strand at 138.220 kb on + strand at 138.237 kb on - strand at 138.268 kb on - strand at 138.273 kb on + strand at 138.281 kb on - strand at 138.281 kb on - strand at 138.311 kb on - strand, within CA264_21370 at 138.349 kb on + strand, within CA264_21370 at 138.350 kb on - strand, within CA264_21370 at 138.351 kb on + strand, within CA264_21370 at 138.355 kb on + strand, within CA264_21370 at 138.356 kb on - strand, within CA264_21370 at 138.396 kb on - strand, within CA264_21370 at 138.410 kb on + strand, within CA264_21370 at 138.410 kb on + strand, within CA264_21370 at 138.411 kb on - strand, within CA264_21370 at 138.411 kb on - strand, within CA264_21370 at 138.411 kb on - strand, within CA264_21370 at 138.411 kb on - strand, within CA264_21370 at 138.412 kb on + strand, within CA264_21370 at 138.505 kb on - strand, within CA264_21370 at 138.602 kb on + strand, within CA264_21370 at 138.604 kb on + strand, within CA264_21370 at 138.604 kb on + strand, within CA264_21370 at 138.607 kb on + strand, within CA264_21370 at 138.644 kb on + strand, within CA264_21370 at 138.698 kb on + strand, within CA264_21370 at 138.704 kb on - strand, within CA264_21370 at 138.716 kb on + strand, within CA264_21370 at 138.757 kb on - strand, within CA264_21370 at 138.815 kb on + strand, within CA264_21370 at 138.815 kb on + strand, within CA264_21370 at 138.816 kb on - strand, within CA264_21370 at 138.903 kb on + strand, within CA264_21370 at 138.915 kb on + strand, within CA264_21370 at 138.935 kb on + strand, within CA264_21370 at 138.935 kb on + strand, within CA264_21370 at 138.935 kb on + strand, within CA264_21370 at 138.936 kb on - strand, within CA264_21370 at 138.936 kb on - strand, within CA264_21370 at 138.938 kb on - strand, within CA264_21370 at 138.939 kb on + strand, within CA264_21370 at 138.939 kb on + strand, within CA264_21370 at 138.940 kb on - strand, within CA264_21370 at 138.940 kb on - strand, within CA264_21370 at 138.940 kb on - strand, within CA264_21370 at 138.940 kb on - strand, within CA264_21370 at 138.940 kb on - strand, within CA264_21370 at 138.940 kb on - strand, within CA264_21370 at 138.960 kb on - strand at 138.981 kb on + strand at 139.041 kb on - strand at 139.065 kb on - strand at 139.099 kb on - strand at 139.104 kb on - strand at 139.125 kb on + strand at 139.126 kb on - strand at 139.126 kb on - strand at 139.151 kb on + strand at 139.152 kb on - strand at 139.152 kb on - strand at 139.171 kb on + strand at 139.171 kb on + strand at 139.210 kb on - strand, within CA264_21375 at 139.215 kb on + strand, within CA264_21375 at 139.215 kb on + strand, within CA264_21375 at 139.216 kb on - strand, within CA264_21375 at 139.216 kb on - strand, within CA264_21375 at 139.236 kb on - strand, within CA264_21375 at 139.240 kb on - strand, within CA264_21375 at 139.285 kb on + strand, within CA264_21375 at 139.288 kb on + strand, within CA264_21375 at 139.288 kb on + strand, within CA264_21375 at 139.335 kb on + strand, within CA264_21375 at 139.336 kb on - strand, within CA264_21375 at 139.338 kb on - strand, within CA264_21375 at 139.338 kb on - strand, within CA264_21375 at 139.357 kb on - strand, within CA264_21375 at 139.384 kb on + strand, within CA264_21375 at 139.385 kb on - strand, within CA264_21375 at 139.393 kb on - strand, within CA264_21375 at 139.424 kb on + strand, within CA264_21375 at 139.448 kb on + strand, within CA264_21375 at 139.449 kb on - strand, within CA264_21375 at 139.484 kb on + strand, within CA264_21375 at 139.500 kb on + strand, within CA264_21375 at 139.501 kb on - strand, within CA264_21375 at 139.501 kb on - strand, within CA264_21375 at 139.501 kb on - strand, within CA264_21375 at 139.576 kb on - strand, within CA264_21375 at 139.635 kb on - strand at 139.818 kb on + strand, within CA264_21380 at 139.820 kb on + strand, within CA264_21380 at 139.822 kb on + strand, within CA264_21380 at 139.880 kb on + strand, within CA264_21380
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Cobalt chloride 0.05 mM remove 137,207 - +1.0 137,222 + +0.5 137,223 - -0.9 137,264 + +1.1 137,264 + +0.0 137,279 + -0.1 137,302 + -1.0 137,303 - +0.4 137,306 + -0.4 137,307 - +0.0 137,307 - +0.7 137,311 + -0.7 137,311 + -0.3 137,314 + +0.5 137,333 - -0.4 137,333 - +0.6 137,371 + +0.5 137,372 - -0.1 137,381 + +0.4 137,382 - -0.3 137,382 - +0.1 137,411 + -0.1 137,419 + +0.1 137,428 + -0.0 137,428 + -0.2 137,429 - -0.6 137,431 - -0.2 137,431 - -1.0 137,432 + +1.6 137,432 + +0.5 137,433 - -0.3 137,433 - -0.5 137,453 + -0.1 137,453 + +0.7 137,457 + +0.3 137,458 - +0.3 137,478 + -0.2 137,478 + +0.4 137,479 - +0.5 137,479 - +0.8 137,480 + -0.3 137,481 - -0.7 137,491 + +0.9 137,491 + -0.3 137,491 + +0.1 137,492 - +3.1 137,563 - CA264_21365 0.18 +0.1 137,563 - CA264_21365 0.18 -0.3 137,581 - CA264_21365 0.23 -0.1 137,594 + CA264_21365 0.26 -0.3 137,594 + CA264_21365 0.26 +1.1 137,595 - CA264_21365 0.26 -0.5 137,698 + CA264_21365 0.53 -0.6 137,741 + CA264_21365 0.65 +0.4 137,744 - CA264_21365 0.65 +2.5 137,744 - CA264_21365 0.65 -0.4 137,801 - CA264_21365 0.80 +0.5 137,801 - CA264_21365 0.80 -0.4 137,801 - CA264_21365 0.80 +0.6 137,866 + -0.0 137,866 + +0.6 137,867 - +0.2 137,886 + -2.0 137,887 - -0.0 137,887 - -2.1 137,901 + -0.7 137,902 - -0.3 137,908 - -1.0 137,915 - -0.5 137,932 - -0.6 137,932 - +0.9 137,958 + -0.6 137,983 - -0.3 137,983 - -0.1 138,055 + -0.4 138,055 + -1.4 138,057 + +0.2 138,132 + +2.3 138,133 - -0.1 138,200 + +0.2 138,201 - +1.3 138,201 - -0.2 138,201 - -0.4 138,220 + -0.1 138,237 - -0.2 138,268 - -1.6 138,273 + -0.2 138,281 - +0.3 138,281 - -0.1 138,311 - CA264_21370 0.13 -0.6 138,349 + CA264_21370 0.17 -0.2 138,350 - CA264_21370 0.17 +0.5 138,351 + CA264_21370 0.17 -0.8 138,355 + CA264_21370 0.18 +1.1 138,356 - CA264_21370 0.18 -0.0 138,396 - CA264_21370 0.23 +0.5 138,410 + CA264_21370 0.24 +0.6 138,410 + CA264_21370 0.24 -0.3 138,411 - CA264_21370 0.24 +1.1 138,411 - CA264_21370 0.24 +0.1 138,411 - CA264_21370 0.24 -0.5 138,411 - CA264_21370 0.24 -0.4 138,412 + CA264_21370 0.25 +1.3 138,505 - CA264_21370 0.36 +0.9 138,602 + CA264_21370 0.47 -0.6 138,604 + CA264_21370 0.48 +0.1 138,604 + CA264_21370 0.48 +0.3 138,607 + CA264_21370 0.48 +1.3 138,644 + CA264_21370 0.52 +0.6 138,698 + CA264_21370 0.59 -0.1 138,704 - CA264_21370 0.59 +0.3 138,716 + CA264_21370 0.61 -0.1 138,757 - CA264_21370 0.66 +0.5 138,815 + CA264_21370 0.73 +0.5 138,815 + CA264_21370 0.73 +0.6 138,816 - CA264_21370 0.73 -0.9 138,903 + CA264_21370 0.83 -0.2 138,915 + CA264_21370 0.85 +0.2 138,935 + CA264_21370 0.87 +0.5 138,935 + CA264_21370 0.87 -0.0 138,935 + CA264_21370 0.87 -0.2 138,936 - CA264_21370 0.87 -0.5 138,936 - CA264_21370 0.87 -0.3 138,938 - CA264_21370 0.87 +1.8 138,939 + CA264_21370 0.88 +0.7 138,939 + CA264_21370 0.88 +0.1 138,940 - CA264_21370 0.88 +3.3 138,940 - CA264_21370 0.88 -0.6 138,940 - CA264_21370 0.88 +0.2 138,940 - CA264_21370 0.88 -0.5 138,940 - CA264_21370 0.88 -0.1 138,940 - CA264_21370 0.88 +2.3 138,960 - -0.3 138,981 + -0.4 139,041 - +0.4 139,065 - +0.4 139,099 - -0.1 139,104 - +0.1 139,125 + -0.2 139,126 - -0.4 139,126 - -0.1 139,151 + +0.1 139,152 - +0.8 139,152 - +0.3 139,171 + +1.0 139,171 + +0.3 139,210 - CA264_21375 0.14 +2.1 139,215 + CA264_21375 0.15 +0.7 139,215 + CA264_21375 0.15 +1.1 139,216 - CA264_21375 0.16 -0.6 139,216 - CA264_21375 0.16 +0.6 139,236 - CA264_21375 0.20 +0.7 139,240 - CA264_21375 0.20 -0.3 139,285 + CA264_21375 0.29 +0.1 139,288 + CA264_21375 0.30 +0.1 139,288 + CA264_21375 0.30 -0.3 139,335 + CA264_21375 0.39 +0.6 139,336 - CA264_21375 0.39 -0.5 139,338 - CA264_21375 0.40 -0.4 139,338 - CA264_21375 0.40 -0.5 139,357 - CA264_21375 0.43 +0.4 139,384 + CA264_21375 0.49 +0.6 139,385 - CA264_21375 0.49 -0.3 139,393 - CA264_21375 0.50 +0.2 139,424 + CA264_21375 0.57 -0.9 139,448 + CA264_21375 0.61 -0.5 139,449 - CA264_21375 0.62 -0.5 139,484 + CA264_21375 0.68 +0.2 139,500 + CA264_21375 0.72 +0.6 139,501 - CA264_21375 0.72 +0.8 139,501 - CA264_21375 0.72 -1.2 139,501 - CA264_21375 0.72 -0.6 139,576 - CA264_21375 0.87 +0.8 139,635 - -0.8 139,818 + CA264_21380 0.13 +0.2 139,820 + CA264_21380 0.14 +0.6 139,822 + CA264_21380 0.14 +0.2 139,880 + CA264_21380 0.19 -0.3
Or see this region's nucleotide sequence