Strain Fitness in Pontibacter actiniarum KMM 6156, DSM 19842 around CA264_21295

Experiment: m.b. Cobalt chloride 0.05 mM

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntCA264_21285 and CA264_21290 are separated by 12 nucleotidesCA264_21290 and CA264_21295 are separated by 23 nucleotidesCA264_21295 and CA264_21300 are separated by 13 nucleotidesCA264_21300 and CA264_21305 are separated by 130 nucleotides CA264_21285: CA264_21285 - hypothetical protein, at 123,297 to 123,764 _21285 CA264_21290: CA264_21290 - SCO family protein, at 123,777 to 124,433 _21290 CA264_21295: CA264_21295 - hypothetical protein, at 124,457 to 124,855 _21295 CA264_21300: CA264_21300 - hypothetical protein, at 124,869 to 125,432 _21300 CA264_21305: CA264_21305 - hypothetical protein, at 125,563 to 125,895 _21305 Position (kb) 124 125Strain fitness (log2 ratio) -2 -1 0 1 2at 123.491 kb on - strand, within CA264_21285at 123.759 kb on - strandat 123.804 kb on + strandat 123.923 kb on + strand, within CA264_21290at 123.923 kb on + strand, within CA264_21290at 124.069 kb on - strand, within CA264_21290at 124.077 kb on + strand, within CA264_21290at 124.077 kb on + strand, within CA264_21290at 124.077 kb on + strand, within CA264_21290at 124.078 kb on - strand, within CA264_21290at 124.144 kb on + strand, within CA264_21290at 124.313 kb on - strand, within CA264_21290at 124.431 kb on + strandat 124.449 kb on + strandat 124.450 kb on - strandat 124.548 kb on - strand, within CA264_21295at 124.710 kb on - strand, within CA264_21295at 124.710 kb on - strand, within CA264_21295at 124.772 kb on + strand, within CA264_21295at 124.825 kb on - strandat 124.849 kb on + strandat 124.849 kb on + strandat 124.850 kb on - strandat 124.850 kb on - strandat 124.864 kb on - strandat 124.892 kb on - strandat 124.960 kb on - strand, within CA264_21300at 125.135 kb on + strand, within CA264_21300at 125.192 kb on - strand, within CA264_21300at 125.386 kb on - strandat 125.493 kb on + strandat 125.493 kb on + strandat 125.497 kb on - strandat 125.499 kb on - strandat 125.501 kb on + strandat 125.502 kb on - strandat 125.502 kb on - strandat 125.502 kb on - strandat 125.656 kb on - strand, within CA264_21305at 125.716 kb on - strand, within CA264_21305at 125.754 kb on + strand, within CA264_21305at 125.794 kb on - strand, within CA264_21305

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Cobalt chloride 0.05 mM
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123,491 - CA264_21285 0.41 -0.5
123,759 - +1.8
123,804 + -1.3
123,923 + CA264_21290 0.22 -2.0
123,923 + CA264_21290 0.22 -1.0
124,069 - CA264_21290 0.44 -0.6
124,077 + CA264_21290 0.46 -1.7
124,077 + CA264_21290 0.46 -0.3
124,077 + CA264_21290 0.46 -1.5
124,078 - CA264_21290 0.46 -0.2
124,144 + CA264_21290 0.56 -0.8
124,313 - CA264_21290 0.82 -0.8
124,431 + -0.0
124,449 + -2.4
124,450 - -0.6
124,548 - CA264_21295 0.23 -1.4
124,710 - CA264_21295 0.63 -0.7
124,710 - CA264_21295 0.63 -1.1
124,772 + CA264_21295 0.79 -1.5
124,825 - +1.6
124,849 + -1.8
124,849 + -0.5
124,850 - -0.9
124,850 - +0.3
124,864 - +0.5
124,892 - +0.1
124,960 - CA264_21300 0.16 -1.5
125,135 + CA264_21300 0.47 -0.4
125,192 - CA264_21300 0.57 +0.7
125,386 - -1.1
125,493 + -1.6
125,493 + -0.1
125,497 - -2.2
125,499 - -0.3
125,501 + +0.7
125,502 - -0.8
125,502 - -0.7
125,502 - +0.9
125,656 - CA264_21305 0.28 -2.2
125,716 - CA264_21305 0.46 -0.2
125,754 + CA264_21305 0.57 +0.7
125,794 - CA264_21305 0.69 -0.4

Or see this region's nucleotide sequence