Experiment: m.b. Cobalt chloride 0.05 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_20585 and CA264_20590 are separated by 11 nucleotides CA264_20590 and CA264_20595 are separated by 171 nucleotides CA264_20595 and CA264_20600 are separated by 165 nucleotides CA264_20600 and CA264_20605 are separated by 107 nucleotides
CA264_20585: CA264_20585 - 16S rRNA processing protein RimM, at 4,740,065 to 4,740,649
_20585
CA264_20590: CA264_20590 - 30S ribosomal protein S16, at 4,740,661 to 4,741,206
_20590
CA264_20595: CA264_20595 - acyl-CoA desaturase, at 4,741,378 to 4,742,148
_20595
CA264_20600: CA264_20600 - RNA pseudouridine synthase, at 4,742,314 to 4,742,991
_20600
CA264_20605: CA264_20605 - 3-methyl-2-oxobutanoate hydroxymethyltransferase, at 4,743,099 to 4,743,917
_20605
Position (kb)
4741
4742
4743 Strain fitness (log2 ratio)
-1
0
1 at 4741.286 kb on + strand at 4741.286 kb on + strand at 4741.306 kb on + strand at 4741.307 kb on - strand at 4741.307 kb on - strand at 4741.312 kb on - strand at 4741.619 kb on + strand, within CA264_20595 at 4741.626 kb on - strand, within CA264_20595 at 4741.626 kb on - strand, within CA264_20595 at 4741.626 kb on - strand, within CA264_20595 at 4741.661 kb on - strand, within CA264_20595 at 4741.728 kb on - strand, within CA264_20595 at 4741.739 kb on + strand, within CA264_20595 at 4741.769 kb on + strand, within CA264_20595 at 4741.770 kb on - strand, within CA264_20595 at 4741.770 kb on - strand, within CA264_20595 at 4741.770 kb on - strand, within CA264_20595 at 4741.770 kb on - strand, within CA264_20595 at 4741.863 kb on - strand, within CA264_20595 at 4741.902 kb on + strand, within CA264_20595 at 4741.903 kb on - strand, within CA264_20595 at 4742.012 kb on + strand, within CA264_20595 at 4742.012 kb on + strand, within CA264_20595 at 4742.013 kb on - strand, within CA264_20595 at 4742.013 kb on - strand, within CA264_20595 at 4742.024 kb on + strand, within CA264_20595 at 4742.087 kb on + strand at 4742.201 kb on + strand at 4742.201 kb on + strand at 4742.202 kb on - strand at 4742.229 kb on + strand at 4742.229 kb on + strand at 4742.229 kb on + strand at 4742.368 kb on + strand at 4742.369 kb on - strand at 4742.391 kb on + strand, within CA264_20600 at 4742.392 kb on - strand, within CA264_20600 at 4742.392 kb on - strand, within CA264_20600 at 4742.462 kb on + strand, within CA264_20600 at 4742.463 kb on - strand, within CA264_20600 at 4742.493 kb on + strand, within CA264_20600 at 4742.513 kb on - strand, within CA264_20600 at 4742.586 kb on - strand, within CA264_20600 at 4742.707 kb on + strand, within CA264_20600 at 4742.708 kb on - strand, within CA264_20600 at 4742.749 kb on + strand, within CA264_20600 at 4742.861 kb on + strand, within CA264_20600 at 4742.861 kb on + strand, within CA264_20600 at 4742.862 kb on - strand, within CA264_20600 at 4742.876 kb on + strand, within CA264_20600 at 4742.876 kb on + strand, within CA264_20600 at 4742.877 kb on - strand, within CA264_20600 at 4742.999 kb on + strand at 4743.000 kb on - strand at 4743.002 kb on - strand at 4743.004 kb on + strand at 4743.004 kb on + strand at 4743.018 kb on + strand at 4743.070 kb on + strand at 4743.077 kb on + strand at 4743.096 kb on + strand at 4743.100 kb on + strand at 4743.100 kb on + strand at 4743.100 kb on + strand at 4743.101 kb on - strand at 4743.101 kb on - strand at 4743.101 kb on - strand at 4743.104 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Cobalt chloride 0.05 mM remove 4,741,286 + +0.3 4,741,286 + +0.7 4,741,306 + +0.5 4,741,307 - -0.2 4,741,307 - +1.1 4,741,312 - +0.2 4,741,619 + CA264_20595 0.31 -0.7 4,741,626 - CA264_20595 0.32 +0.2 4,741,626 - CA264_20595 0.32 -1.3 4,741,626 - CA264_20595 0.32 -1.0 4,741,661 - CA264_20595 0.37 -0.0 4,741,728 - CA264_20595 0.45 +0.7 4,741,739 + CA264_20595 0.47 +0.2 4,741,769 + CA264_20595 0.51 -0.0 4,741,770 - CA264_20595 0.51 +0.1 4,741,770 - CA264_20595 0.51 +0.0 4,741,770 - CA264_20595 0.51 -0.5 4,741,770 - CA264_20595 0.51 -0.3 4,741,863 - CA264_20595 0.63 +0.2 4,741,902 + CA264_20595 0.68 -0.6 4,741,903 - CA264_20595 0.68 -0.8 4,742,012 + CA264_20595 0.82 +0.2 4,742,012 + CA264_20595 0.82 -0.5 4,742,013 - CA264_20595 0.82 +0.2 4,742,013 - CA264_20595 0.82 -0.4 4,742,024 + CA264_20595 0.84 -0.3 4,742,087 + -0.6 4,742,201 + +0.5 4,742,201 + +0.6 4,742,202 - -1.0 4,742,229 + -1.0 4,742,229 + +0.0 4,742,229 + +0.1 4,742,368 + -0.2 4,742,369 - -0.8 4,742,391 + CA264_20600 0.11 -0.2 4,742,392 - CA264_20600 0.12 +0.3 4,742,392 - CA264_20600 0.12 +0.5 4,742,462 + CA264_20600 0.22 +1.1 4,742,463 - CA264_20600 0.22 -0.7 4,742,493 + CA264_20600 0.26 -1.4 4,742,513 - CA264_20600 0.29 -0.8 4,742,586 - CA264_20600 0.40 -0.8 4,742,707 + CA264_20600 0.58 -0.3 4,742,708 - CA264_20600 0.58 +0.6 4,742,749 + CA264_20600 0.64 -0.1 4,742,861 + CA264_20600 0.81 -0.4 4,742,861 + CA264_20600 0.81 -0.8 4,742,862 - CA264_20600 0.81 +0.8 4,742,876 + CA264_20600 0.83 +1.7 4,742,876 + CA264_20600 0.83 +0.2 4,742,877 - CA264_20600 0.83 -0.8 4,742,999 + +0.2 4,743,000 - +0.2 4,743,002 - +0.2 4,743,004 + +0.1 4,743,004 + -0.2 4,743,018 + +1.0 4,743,070 + -0.4 4,743,077 + -0.1 4,743,096 + +0.2 4,743,100 + -0.9 4,743,100 + +0.5 4,743,100 + +0.6 4,743,101 - -0.1 4,743,101 - -0.2 4,743,101 - -1.3 4,743,104 - -1.5
Or see this region's nucleotide sequence